RNA–Protein interactions for RNA: ENST00000534149.5

CTSB-230, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-230ENST00000534149 HIST1H2AHQ96KK5 128 aa13.88□□□□□ -0.19
CTSB-230ENST00000534149 HIST1H2AJQ99878 128 aa13.88□□□□□ -0.19
CTSB-230ENST00000534149 CCDC77Q9BR77 488 aa13.88□□□□□ -0.19
CTSB-230ENST00000534149 H2AFJQ9BTM1 129 aa13.88□□□□□ -0.19
CTSB-230ENST00000534149 AICDAQ9GZX7 198 aa13.88□□□□□ -0.19
CTSB-230ENST00000534149 CLK4Q9HAZ1 481 aaKnown RBP13.88□□□□□ -0.19
CTSB-230ENST00000534149 DLL4Q9NR61 685 aa13.88□□□□□ -0.19
CTSB-230ENST00000534149 IARS2Q9NSE4 1012 aaKnown RBP13.88□□□□□ -0.19
CTSB-230ENST00000534149 ARL15Q9NXU5 204 aa13.88□□□□□ -0.19
CTSB-230ENST00000534149 Q9UFV3 132 aa13.88□□□□□ -0.19
CTSB-230ENST00000534149 PLEKHA6Q9Y2H5 1048 aa13.88□□□□□ -0.19
CTSB-230ENST00000534149 YARS2Q9Y2Z4 477 aaKnown RBP13.88□□□□□ -0.19
CTSB-230ENST00000534149 MMACHCQ9Y4U1 282 aa13.88□□□□□ -0.19
CTSB-230ENST00000534149 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.87□□□□□ -0.19
CTSB-230ENST00000534149 MAGEB16A2A368 324 aa13.87□□□□□ -0.19
CTSB-230ENST00000534149 URADA6NGE7 173 aa13.87□□□□□ -0.19
CTSB-230ENST00000534149 TMEM200CA6NKL6 621 aa13.87□□□□□ -0.19
CTSB-230ENST00000534149 TGFBR3LH3BV60 316 aa13.87□□□□□ -0.19
CTSB-230ENST00000534149 BCKDKO14874 412 aa13.87□□□□□ -0.19
CTSB-230ENST00000534149 FAM155BO75949 473 aa13.87□□□□□ -0.19
CTSB-230ENST00000534149 SMIM10L1P0DMW3 83 aa13.87□□□□□ -0.19
CTSB-230ENST00000534149 MLNP12872 115 aa13.87□□□□□ -0.19
CTSB-230ENST00000534149 ADH7P40394 386 aa13.87□□□□□ -0.19
CTSB-230ENST00000534149 GPR143P51810 404 aa13.87□□□□□ -0.19
CTSB-230ENST00000534149 CDKN2DP55273 166 aa13.87□□□□□ -0.19
CTSB-230ENST00000534149 REEP5Q00765 189 aa13.87□□□□□ -0.19
CTSB-230ENST00000534149 CSHL1Q14406 222 aa13.87□□□□□ -0.19
CTSB-230ENST00000534149 HSP90AA5PQ58FG0 334 aa13.87□□□□□ -0.19
CTSB-230ENST00000534149 XKR6Q5GH73 641 aa13.87□□□□□ -0.19
CTSB-230ENST00000534149 TOR1AIP1Q5JTV8 583 aa13.87□□□□□ -0.19
CTSB-230ENST00000534149 RBM20Q5T481 1227 aaKnown RBP13.87□□□□□ -0.19
CTSB-230ENST00000534149 HECTD2Q5U5R9 776 aa13.87□□□□□ -0.19
CTSB-230ENST00000534149 ARSKQ6UWY0 536 aa13.87□□□□□ -0.19
CTSB-230ENST00000534149 SLC22A16Q86VW1 577 aa13.87□□□□□ -0.19
CTSB-230ENST00000534149 SCUBE1Q8IWY4 988 aa13.87□□□□□ -0.19
CTSB-230ENST00000534149 LMNTD2Q8IXW0 634 aa13.87□□□□□ -0.19
CTSB-230ENST00000534149 AGGF1Q8N302 714 aaeCLIP13.87□□□□□ -0.19
CTSB-230ENST00000534149 MAIP1Q8WWC4 291 aa13.87□□□□□ -0.19
CTSB-230ENST00000534149 RMND5BQ96G75 393 aaPredicted RBP13.87□□□□□ -0.19
CTSB-230ENST00000534149 SMIM10Q96HG1 83 aa13.87□□□□□ -0.19
CTSB-230ENST00000534149 SERPINB12Q96P63 405 aa13.87□□□□□ -0.19
CTSB-230ENST00000534149 FAM167BQ9BTA0 163 aa13.87□□□□□ -0.19
CTSB-230ENST00000534149 CLEC4MQ9H2X3 399 aaPredicted RBP13.87□□□□□ -0.19
CTSB-230ENST00000534149 TAS2R13Q9NYV9 303 aa13.87□□□□□ -0.19
CTSB-230ENST00000534149 PPIEQ9UNP9 301 aaKnown RBP13.87□□□□□ -0.19
CTSB-230ENST00000534149 MAD1L1Q9Y6D9 718 aa13.87□□□□□ -0.19
CTSB-230ENST00000534149 ARHGAP21Q5T5U3 1957 aa13.86□□□□□ -0.19
CTSB-230ENST00000534149 A0A0G2JN53 185 aa13.86□□□□□ -0.19
CTSB-230ENST00000534149 OR14I1A6ND48 311 aa13.86□□□□□ -0.19
CTSB-230ENST00000534149 PABPN1LA6NDY0 278 aaKnown RBP13.86□□□□□ -0.19
CTSB-230ENST00000534149 WWP2O00308 870 aa13.86□□□□□ -0.19
CTSB-230ENST00000534149 ZFAND5O76080 213 aa13.86□□□□□ -0.19
CTSB-230ENST00000534149 GLSO94925 669 aaPredicted RBP13.86□□□□□ -0.19
CTSB-230ENST00000534149 GUCA1CO95843 209 aa13.86□□□□□ -0.19
CTSB-230ENST00000534149 IGHG3P01860 377 aa13.86□□□□□ -0.19
CTSB-230ENST00000534149 DNASE1P24855 282 aa13.86□□□□□ -0.19
CTSB-230ENST00000534149 SOX3P41225 446 aa13.86□□□□□ -0.19
CTSB-230ENST00000534149 MAGEA5P43359 124 aa13.86□□□□□ -0.19
CTSB-230ENST00000534149 HNRNPFP52597 415 aaKnown RBP13.86□□□□□ -0.19
CTSB-230ENST00000534149 RBBP5Q15291 538 aaKnown RBP13.86□□□□□ -0.19
CTSB-230ENST00000534149 ZNF750Q32MQ0 723 aa13.86□□□□□ -0.19
CTSB-230ENST00000534149 RGS9BPQ6ZS82 235 aa13.86□□□□□ -0.19
CTSB-230ENST00000534149 TRILQ7L0X0 811 aa13.86□□□□□ -0.19
CTSB-230ENST00000534149 WDR53Q7Z5U6 358 aaPredicted RBP13.86□□□□□ -0.19
CTSB-230ENST00000534149 TMPRSS11BQ86T26 416 aa13.86□□□□□ -0.19
CTSB-230ENST00000534149 GPALPP1Q8IXQ4 340 aa13.86□□□□□ -0.19
CTSB-230ENST00000534149 TMEM251Q8N6I4 163 aa13.86□□□□□ -0.19
CTSB-230ENST00000534149 TMEM52Q8NDY8 209 aa13.86□□□□□ -0.19
CTSB-230ENST00000534149 SLCO2A1Q92959 643 aa13.86□□□□□ -0.19
CTSB-230ENST00000534149 FBXL8Q96CD0 374 aa13.86□□□□□ -0.19
CTSB-230ENST00000534149 XAB2Q9HCS7 855 aaKnown RBP13.86□□□□□ -0.19
CTSB-230ENST00000534149 PRTFDC1Q9NRG1 225 aa13.86□□□□□ -0.19
CTSB-230ENST00000534149 RASSF1Q9NS23 344 aa13.86□□□□□ -0.19
CTSB-230ENST00000534149 RPH3AQ9Y2J0 694 aaPredicted RBP13.86□□□□□ -0.19
CTSB-230ENST00000534149 CLDN16Q9Y5I7 305 aa13.86□□□□□ -0.19
CTSB-230ENST00000534149 PROM1O43490 865 aa13.85□□□□□ -0.19
CTSB-230ENST00000534149 KRT14P02533 472 aa13.85□□□□□ -0.19
CTSB-230ENST00000534149 CELA3AP09093 270 aa13.85□□□□□ -0.19
CTSB-230ENST00000534149 KIR2DL3P43628 341 aa13.85□□□□□ -0.19
CTSB-230ENST00000534149 PGGT1BP53609 377 aa13.85□□□□□ -0.19
CTSB-230ENST00000534149 AP1S2P56377 157 aa13.85□□□□□ -0.19
CTSB-230ENST00000534149 BTN3A2P78410 334 aa13.85□□□□□ -0.19
CTSB-230ENST00000534149 RUNX2Q13950 521 aa13.85□□□□□ -0.19
CTSB-230ENST00000534149 SLC25A35Q3KQZ1 300 aa13.85□□□□□ -0.19
CTSB-230ENST00000534149 NDUFAF5Q5TEU4 345 aa13.85□□□□□ -0.19
CTSB-230ENST00000534149 GK5Q6ZS86 529 aa13.85□□□□□ -0.19
CTSB-230ENST00000534149 FAM109AQ8N4B1 249 aa13.85□□□□□ -0.19
CTSB-230ENST00000534149 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.85□□□□□ -0.19
CTSB-230ENST00000534149 C2CD4AQ8NCU7 369 aaPredicted RBP13.85□□□□□ -0.19
CTSB-230ENST00000534149 MCUQ8NE86 351 aa13.85□□□□□ -0.19
CTSB-230ENST00000534149 TRPV3Q8NET8 790 aa13.85□□□□□ -0.19
CTSB-230ENST00000534149 ALPK1Q96QP1 1244 aa13.85□□□□□ -0.19
CTSB-230ENST00000534149 RASL10BQ96S79 203 aa13.85□□□□□ -0.19
CTSB-230ENST00000534149 FAM173AQ9BQD7 235 aa13.85□□□□□ -0.19
CTSB-230ENST00000534149 AIF1LQ9BQI0 150 aa13.85□□□□□ -0.19
CTSB-230ENST00000534149 PELI2Q9HAT8 420 aa13.85□□□□□ -0.19
CTSB-230ENST00000534149 CRIM1Q9NZV1 1036 aa13.85□□□□□ -0.19
CTSB-230ENST00000534149 MYOTQ9UBF9 498 aa13.85□□□□□ -0.19
CTSB-230ENST00000534149 ACAD8Q9UKU7 415 aa13.85□□□□□ -0.19
CTSB-230ENST00000534149 DYRK1BQ9Y463 629 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms