RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 ASZ1Q8WWH4 475 aa18.53■□□□□ 0.56
CAPN1-226ENST00000533820 DEPDC7Q96QD5 511 aa18.53■□□□□ 0.56
CAPN1-226ENST00000533820 RIOK2Q9BVS4 552 aaKnown RBP18.53■□□□□ 0.56
CAPN1-226ENST00000533820 C1orf226A1L170 272 aa18.53■□□□□ 0.56
CAPN1-226ENST00000533820 RGS5O15539 181 aa18.53■□□□□ 0.56
CAPN1-226ENST00000533820 ABLIM3O94929 683 aa18.53■□□□□ 0.56
CAPN1-226ENST00000533820 SLC10A3P09131 477 aa18.53■□□□□ 0.56
CAPN1-226ENST00000533820 MAPK8P45983 427 aa18.53■□□□□ 0.56
CAPN1-226ENST00000533820 LRRC74AQ0VAA2 488 aa18.53■□□□□ 0.56
CAPN1-226ENST00000533820 C10orf62Q5T681 223 aaPredicted RBP18.53■□□□□ 0.56
CAPN1-226ENST00000533820 TUBA3EQ6PEY2 450 aa18.53■□□□□ 0.56
CAPN1-226ENST00000533820 CCBE1Q6UXH8 406 aaPredicted RBP18.53■□□□□ 0.56
CAPN1-226ENST00000533820 RNF130Q86XS8 419 aa18.53■□□□□ 0.56
CAPN1-226ENST00000533820 CLP1Q92989 425 aaKnown RBP18.53■□□□□ 0.56
CAPN1-226ENST00000533820 NEIL2Q969S2 332 aa18.53■□□□□ 0.56
CAPN1-226ENST00000533820 STOX2Q9P2F5 926 aaPredicted RBP18.53■□□□□ 0.56
CAPN1-226ENST00000533820 CTRB1P17538 263 aa18.53■□□□□ 0.56
CAPN1-226ENST00000533820 RGS6P49758 472 aa18.53■□□□□ 0.56
CAPN1-226ENST00000533820 ATN1P54259 1190 aaPredicted RBP18.53■□□□□ 0.56
CAPN1-226ENST00000533820 RPS26P62854 115 aaKnown RBP18.53■□□□□ 0.56
CAPN1-226ENST00000533820 SCARB2Q14108 478 aa18.53■□□□□ 0.56
CAPN1-226ENST00000533820 TBCEQ15813 527 aaPredicted RBP18.53■□□□□ 0.56
CAPN1-226ENST00000533820 CTRB2Q6GPI1 263 aa18.53■□□□□ 0.56
CAPN1-226ENST00000533820 GAREM2Q75VX8 874 aa18.53■□□□□ 0.56
CAPN1-226ENST00000533820 GABARAPL3Q9BY60 117 aa18.53■□□□□ 0.56
CAPN1-226ENST00000533820 NARFLQ9H6Q4 476 aa18.53■□□□□ 0.56
CAPN1-226ENST00000533820 C11orf16Q9NQ32 467 aa18.53■□□□□ 0.56
CAPN1-226ENST00000533820 SPATA6Q9NWH7 488 aaPredicted RBP18.53■□□□□ 0.56
CAPN1-226ENST00000533820 SCN8AQ9UQD0 1980 aa18.52■□□□□ 0.56
CAPN1-226ENST00000533820 A0A1W2PRU2 124 aa18.52■□□□□ 0.56
CAPN1-226ENST00000533820 H3BM21 787 aa18.52■□□□□ 0.56
CAPN1-226ENST00000533820 KIAA0513O60268 411 aa18.52■□□□□ 0.56
CAPN1-226ENST00000533820 SOX14O95416 240 aa18.52■□□□□ 0.56
CAPN1-226ENST00000533820 CKMT1AP12532 417 aa18.52■□□□□ 0.56
CAPN1-226ENST00000533820 HOXB6P17509 224 aaKnown RBP18.52■□□□□ 0.56
CAPN1-226ENST00000533820 CASP3P42574 277 aa18.52■□□□□ 0.56
CAPN1-226ENST00000533820 STARD3Q14849 445 aa18.52■□□□□ 0.56
CAPN1-226ENST00000533820 KLHL17Q6TDP4 642 aa18.52■□□□□ 0.56
CAPN1-226ENST00000533820 TXNDC15Q96J42 360 aa18.52■□□□□ 0.56
CAPN1-226ENST00000533820 FAM129BQ96TA1 746 aa18.52■□□□□ 0.56
CAPN1-226ENST00000533820 PKP4Q99569 1192 aa18.52■□□□□ 0.56
CAPN1-226ENST00000533820 FAM83DQ9H4H8 585 aa18.52■□□□□ 0.56
CAPN1-226ENST00000533820 ZNF556Q9HAH1 456 aa18.52■□□□□ 0.56
CAPN1-226ENST00000533820 EXO1Q9UQ84 846 aaKnown RBP18.52■□□□□ 0.56
CAPN1-226ENST00000533820 SH2B3Q9UQQ2 575 aa18.52■□□□□ 0.56
CAPN1-226ENST00000533820 PCDHGA2Q9Y5H1 932 aa18.52■□□□□ 0.56
CAPN1-226ENST00000533820 PRAMEF33A0A0G2JMD5 474 aa18.52■□□□□ 0.55
CAPN1-226ENST00000533820 ADAMDEC1O15204 470 aa18.52■□□□□ 0.55
CAPN1-226ENST00000533820 PRAMEF10O60809 474 aa18.52■□□□□ 0.55
CAPN1-226ENST00000533820 IGFBP1P08833 259 aaPredicted RBP18.52■□□□□ 0.55
CAPN1-226ENST00000533820 NAGAP17050 411 aa18.52■□□□□ 0.55
CAPN1-226ENST00000533820 AZGP1P25311 298 aaKnown RBP18.52■□□□□ 0.55
CAPN1-226ENST00000533820 CHI3L1P36222 383 aaPredicted RBP18.52■□□□□ 0.55
CAPN1-226ENST00000533820 AP1S2P56377 157 aa18.52■□□□□ 0.55
CAPN1-226ENST00000533820 IFI44LQ53G44 452 aa18.52■□□□□ 0.55
CAPN1-226ENST00000533820 LIPJQ5W064 366 aa18.52■□□□□ 0.55
CAPN1-226ENST00000533820 FAM205BPQ63HN1 556 aa18.52■□□□□ 0.55
CAPN1-226ENST00000533820 GPR155Q7Z3F1 870 aa18.52■□□□□ 0.55
CAPN1-226ENST00000533820 OR8H2Q8N162 312 aa18.52■□□□□ 0.55
CAPN1-226ENST00000533820 LILRB1Q8NHL6 650 aaPredicted RBP18.52■□□□□ 0.55
CAPN1-226ENST00000533820 TMEM159Q96B96 161 aa18.52■□□□□ 0.55
CAPN1-226ENST00000533820 TMEM175Q9BSA9 504 aa18.52■□□□□ 0.55
CAPN1-226ENST00000533820 SORBS1Q9BX66 1292 aaKnown RBP18.52■□□□□ 0.55
CAPN1-226ENST00000533820 INSL5Q9Y5Q6 135 aa18.52■□□□□ 0.55
CAPN1-226ENST00000533820 BACE2Q9Y5Z0 518 aa18.52■□□□□ 0.55
CAPN1-226ENST00000533820 KPNA5O15131 536 aa18.51■□□□□ 0.55
CAPN1-226ENST00000533820 ZW10O43264 779 aa18.51■□□□□ 0.55
CAPN1-226ENST00000533820 TGM4P49221 684 aa18.51■□□□□ 0.55
CAPN1-226ENST00000533820 CSTF3Q12996 717 aaKnown RBP18.51■□□□□ 0.55
CAPN1-226ENST00000533820 ASTLQ6HA08 431 aaPredicted RBP18.51■□□□□ 0.55
CAPN1-226ENST00000533820 MSANTD1Q6ZTZ1 278 aa18.51■□□□□ 0.55
CAPN1-226ENST00000533820 PGBD3Q8N328 593 aa18.51■□□□□ 0.55
CAPN1-226ENST00000533820 VANGL1Q8TAA9 524 aaPredicted RBP18.51■□□□□ 0.55
CAPN1-226ENST00000533820 NUAK2Q9H093 628 aa18.51■□□□□ 0.55
CAPN1-226ENST00000533820 CHST8Q9H2A9 424 aa18.51■□□□□ 0.55
CAPN1-226ENST00000533820 MRPL17Q9NRX2 175 aaKnown RBP18.51■□□□□ 0.55
CAPN1-226ENST00000533820 POLR2CP19387 275 aaPredicted RBP18.51■□□□□ 0.55
CAPN1-226ENST00000533820 GPLD1P80108 840 aa18.51■□□□□ 0.55
CAPN1-226ENST00000533820 LINC00299Q6ZSB3 139 aa18.51■□□□□ 0.55
CAPN1-226ENST00000533820 GDPD3Q7L5L3 318 aa18.51■□□□□ 0.55
CAPN1-226ENST00000533820 AQP11Q8NBQ7 271 aa18.51■□□□□ 0.55
CAPN1-226ENST00000533820 OR5H6Q8NGV6 325 aa18.51■□□□□ 0.55
CAPN1-226ENST00000533820 WDR36Q8NI36 951 aaKnown RBP18.51■□□□□ 0.55
CAPN1-226ENST00000533820 WDR48Q8TAF3 677 aa18.51■□□□□ 0.55
CAPN1-226ENST00000533820 FCGR1BQ92637 280 aa18.51■□□□□ 0.55
CAPN1-226ENST00000533820 IL21Q9HBE4 155 aa18.51■□□□□ 0.55
CAPN1-226ENST00000533820 PADI2Q9Y2J8 665 aa18.51■□□□□ 0.55
CAPN1-226ENST00000533820 MAU2Q9Y6X3 613 aa18.51■□□□□ 0.55
CAPN1-226ENST00000533820 IGLV3-16A0A075B6K0 115 aa18.51■□□□□ 0.55
CAPN1-226ENST00000533820 A0A1W2PQ72 361 aa18.51■□□□□ 0.55
CAPN1-226ENST00000533820 SGTAO43765 313 aa18.51■□□□□ 0.55
CAPN1-226ENST00000533820 PCGF2P35227 344 aa18.51■□□□□ 0.55
CAPN1-226ENST00000533820 CSNK1DP48730 415 aa18.51■□□□□ 0.55
CAPN1-226ENST00000533820 SREBF2Q12772 1141 aa18.51■□□□□ 0.55
CAPN1-226ENST00000533820 PTGES3Q15185 160 aaKnown RBP18.51■□□□□ 0.55
CAPN1-226ENST00000533820 SLC5A12Q1EHB4 618 aa18.51■□□□□ 0.55
CAPN1-226ENST00000533820 CDKL4Q5MAI5 379 aa18.51■□□□□ 0.55
CAPN1-226ENST00000533820 BCDIN3DQ7Z5W3 292 aaKnown RBP18.51■□□□□ 0.55
CAPN1-226ENST00000533820 KIAA1958Q8N8K9 716 aa18.51■□□□□ 0.55
CAPN1-226ENST00000533820 POP5Q969H6 163 aaKnown RBP18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms