RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 ANXA5P08758 320 aa10.7□□□□□ -0.7
TRAPPC4-213ENST00000533149 ACPPP15309 386 aa10.7□□□□□ -0.7
TRAPPC4-213ENST00000533149 SOX11P35716 441 aa10.7□□□□□ -0.7
TRAPPC4-213ENST00000533149 GABRA4P48169 554 aa10.7□□□□□ -0.7
TRAPPC4-213ENST00000533149 AGTR2P50052 363 aa10.7□□□□□ -0.7
TRAPPC4-213ENST00000533149 ARSFP54793 590 aa10.7□□□□□ -0.7
TRAPPC4-213ENST00000533149 HERVK_113P63132 956 aa10.7□□□□□ -0.7
TRAPPC4-213ENST00000533149 CDKL1Q00532 357 aa10.7□□□□□ -0.7
TRAPPC4-213ENST00000533149 OCRLQ01968 901 aa10.7□□□□□ -0.7
TRAPPC4-213ENST00000533149 GABPB1Q06547 395 aaPredicted RBP10.7□□□□□ -0.7
TRAPPC4-213ENST00000533149 RCN2Q14257 317 aa10.7□□□□□ -0.7
TRAPPC4-213ENST00000533149 SETDB1Q15047 1291 aa10.7□□□□□ -0.7
TRAPPC4-213ENST00000533149 DEFB110Q30KQ9 67 aa10.7□□□□□ -0.7
TRAPPC4-213ENST00000533149 FBXO48Q5FWF7 155 aa10.7□□□□□ -0.7
TRAPPC4-213ENST00000533149 CDKL4Q5MAI5 379 aa10.7□□□□□ -0.7
TRAPPC4-213ENST00000533149 SULT1C3Q6IMI6 304 aa10.7□□□□□ -0.7
TRAPPC4-213ENST00000533149 SPESP1Q6UW49 350 aa10.7□□□□□ -0.7
TRAPPC4-213ENST00000533149 RPS27LQ71UM5 84 aaKnown RBP10.7□□□□□ -0.7
TRAPPC4-213ENST00000533149 AMIGO1Q86WK6 493 aa10.7□□□□□ -0.7
TRAPPC4-213ENST00000533149 PDPRQ8NCN5 879 aa10.7□□□□□ -0.7
TRAPPC4-213ENST00000533149 PHC3Q8NDX5 983 aa10.7□□□□□ -0.7
TRAPPC4-213ENST00000533149 ESAMQ96AP7 390 aa10.7□□□□□ -0.7
TRAPPC4-213ENST00000533149 RHBDF1Q96CC6 855 aa10.7□□□□□ -0.7
TRAPPC4-213ENST00000533149 RMDN2Q96LZ7 410 aa10.7□□□□□ -0.7
TRAPPC4-213ENST00000533149 C7orf26Q96N11 449 aa10.7□□□□□ -0.7
TRAPPC4-213ENST00000533149 FERD3LQ96RJ6 166 aa10.7□□□□□ -0.7
TRAPPC4-213ENST00000533149 ELAC2Q9BQ52 826 aaKnown RBP10.7□□□□□ -0.7
TRAPPC4-213ENST00000533149 ERVK-6Q9BXR3 956 aa10.7□□□□□ -0.7
TRAPPC4-213ENST00000533149 RNF32Q9H0A6 362 aa10.7□□□□□ -0.7
TRAPPC4-213ENST00000533149 SLC24A3Q9HC58 644 aa10.7□□□□□ -0.7
TRAPPC4-213ENST00000533149 ZNF160Q9HCG1 818 aa10.7□□□□□ -0.7
TRAPPC4-213ENST00000533149 CCM2LQ9NUG4 571 aaPredicted RBP10.7□□□□□ -0.7
TRAPPC4-213ENST00000533149 PRRC2AP48634 2157 aaKnown RBP10.7□□□□□ -0.7
TRAPPC4-213ENST00000533149 PABPN1LA6NDY0 278 aaKnown RBP10.69□□□□□ -0.7
TRAPPC4-213ENST00000533149 C1orf105O95561 183 aa10.69□□□□□ -0.7
TRAPPC4-213ENST00000533149 HSPA4LO95757 839 aa10.69□□□□□ -0.7
TRAPPC4-213ENST00000533149 IGFBP2P18065 325 aa10.69□□□□□ -0.7
TRAPPC4-213ENST00000533149 EEF1DP29692 281 aaKnown RBP10.69□□□□□ -0.7
TRAPPC4-213ENST00000533149 ARRB2P32121 409 aa10.69□□□□□ -0.7
TRAPPC4-213ENST00000533149 SERPINB5P36952 375 aa10.69□□□□□ -0.7
TRAPPC4-213ENST00000533149 BDKRB1P46663 353 aa10.69□□□□□ -0.7
TRAPPC4-213ENST00000533149 SF3A3Q12874 501 aaKnown RBP eCLIP10.69□□□□□ -0.7
TRAPPC4-213ENST00000533149 DSG2Q14126 1118 aa10.69□□□□□ -0.7
TRAPPC4-213ENST00000533149 PCBP2Q15366 365 aaKnown RBP eCLIP10.69□□□□□ -0.7
TRAPPC4-213ENST00000533149 CCSMST1Q4G0I0 132 aa10.69□□□□□ -0.7
TRAPPC4-213ENST00000533149 ARL13AQ5H913 290 aaPredicted RBP10.69□□□□□ -0.7
TRAPPC4-213ENST00000533149 UNC5DQ6UXZ4 953 aa10.69□□□□□ -0.7
TRAPPC4-213ENST00000533149 MBOAT1Q6ZNC8 495 aa10.69□□□□□ -0.7
TRAPPC4-213ENST00000533149 CRLF3Q8IUI8 442 aa10.69□□□□□ -0.7
TRAPPC4-213ENST00000533149 ADGRF3Q8IZF5 1079 aa10.69□□□□□ -0.7
TRAPPC4-213ENST00000533149 BCAS4Q8TDM0 211 aa10.69□□□□□ -0.7
TRAPPC4-213ENST00000533149 BRIX1Q8TDN6 353 aaKnown RBP10.69□□□□□ -0.7
TRAPPC4-213ENST00000533149 PSMF1Q92530 271 aa10.69□□□□□ -0.7
TRAPPC4-213ENST00000533149 TFGQ92734 400 aaPredicted RBP10.69□□□□□ -0.7
TRAPPC4-213ENST00000533149 SDCCAG3Q96C92 435 aa10.69□□□□□ -0.7
TRAPPC4-213ENST00000533149 CCDC138Q96M89 665 aa10.69□□□□□ -0.7
TRAPPC4-213ENST00000533149 SORT1Q99523 831 aa10.69□□□□□ -0.7
TRAPPC4-213ENST00000533149 PKP4Q99569 1192 aa10.69□□□□□ -0.7
TRAPPC4-213ENST00000533149 NSRP1Q9H0G5 558 aaKnown RBP10.69□□□□□ -0.7
TRAPPC4-213ENST00000533149 GSTO2Q9H4Y5 243 aa10.69□□□□□ -0.7
TRAPPC4-213ENST00000533149 SOX17Q9H6I2 414 aaPredicted RBP10.69□□□□□ -0.7
TRAPPC4-213ENST00000533149 ARL15Q9NXU5 204 aa10.69□□□□□ -0.7
TRAPPC4-213ENST00000533149 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.69□□□□□ -0.7
TRAPPC4-213ENST00000533149 KCNN3Q9UGI6 736 aa10.69□□□□□ -0.7
TRAPPC4-213ENST00000533149 EDARQ9UNE0 448 aa10.69□□□□□ -0.7
TRAPPC4-213ENST00000533149 PLCL2Q9UPR0 1127 aa10.69□□□□□ -0.7
TRAPPC4-213ENST00000533149 TNPO3Q9Y5L0 923 aaKnown RBP10.69□□□□□ -0.7
TRAPPC4-213ENST00000533149 E9PLN8 166 aa10.68□□□□□ -0.7
TRAPPC4-213ENST00000533149 IFRD1O00458 451 aaPredicted RBP10.68□□□□□ -0.7
TRAPPC4-213ENST00000533149 HCRTR1O43613 425 aa10.68□□□□□ -0.7
TRAPPC4-213ENST00000533149 BMP10O95393 424 aa10.68□□□□□ -0.7
TRAPPC4-213ENST00000533149 WDPCPO95876 746 aa10.68□□□□□ -0.7
TRAPPC4-213ENST00000533149 FAM107AO95990 144 aa10.68□□□□□ -0.7
TRAPPC4-213ENST00000533149 CHRNGP07510 517 aa10.68□□□□□ -0.7
TRAPPC4-213ENST00000533149 PRR35P0CG20 571 aa10.68□□□□□ -0.7
TRAPPC4-213ENST00000533149 TSPAN8P19075 237 aa10.68□□□□□ -0.7
TRAPPC4-213ENST00000533149 HSPA7P48741 367 aa10.68□□□□□ -0.7
TRAPPC4-213ENST00000533149 CDH13P55290 713 aa10.68□□□□□ -0.7
TRAPPC4-213ENST00000533149 AP1S2P56377 157 aa10.68□□□□□ -0.7
TRAPPC4-213ENST00000533149 SRSF11Q05519 484 aaKnown RBP10.68□□□□□ -0.7
TRAPPC4-213ENST00000533149 ZIC1Q15915 447 aa10.68□□□□□ -0.7
TRAPPC4-213ENST00000533149 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.68□□□□□ -0.7
TRAPPC4-213ENST00000533149 CGB2Q6NT52 195 aa10.68□□□□□ -0.7
TRAPPC4-213ENST00000533149 TTC23LQ6PF05 361 aa10.68□□□□□ -0.7
TRAPPC4-213ENST00000533149 SHISA6Q6ZSJ9 500 aa10.68□□□□□ -0.7
TRAPPC4-213ENST00000533149 FRMD7Q6ZUT3 714 aa10.68□□□□□ -0.7
TRAPPC4-213ENST00000533149 TTLL10Q6ZVT0 673 aa10.68□□□□□ -0.7
TRAPPC4-213ENST00000533149 NDUFAF7Q7L592 441 aa10.68□□□□□ -0.7
TRAPPC4-213ENST00000533149 PIGWQ7Z7B1 504 aa10.68□□□□□ -0.7
TRAPPC4-213ENST00000533149 FAM20CQ8IXL6 584 aa10.68□□□□□ -0.7
TRAPPC4-213ENST00000533149 TCAIMQ8N3R3 496 aa10.68□□□□□ -0.7
TRAPPC4-213ENST00000533149 FBXO15Q8NCQ5 510 aaPredicted RBP10.68□□□□□ -0.7
TRAPPC4-213ENST00000533149 OR52E1Q8NGJ3 308 aa10.68□□□□□ -0.7
TRAPPC4-213ENST00000533149 TRPC4APQ8TEL6 797 aa10.68□□□□□ -0.7
TRAPPC4-213ENST00000533149 ZNF483Q8TF39 744 aaPredicted RBP10.68□□□□□ -0.7
TRAPPC4-213ENST00000533149 ZNF473Q8WTR7 871 aaKnown RBP10.68□□□□□ -0.7
TRAPPC4-213ENST00000533149 FBXL8Q96CD0 374 aa10.68□□□□□ -0.7
TRAPPC4-213ENST00000533149 THOC1Q96FV9 657 aaKnown RBP10.68□□□□□ -0.7
TRAPPC4-213ENST00000533149 GPR137Q96N19 417 aa10.68□□□□□ -0.7
TRAPPC4-213ENST00000533149 NSUN5Q96P11 429 aaKnown RBP10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms