RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 C9P02748 559 aa17.6■□□□□ 0.41
SMPD1-208ENST00000533123 GBAP04062 536 aa17.6■□□□□ 0.41
SMPD1-208ENST00000533123 S100A3P33764 101 aa17.6■□□□□ 0.41
SMPD1-208ENST00000533123 RPS15AP62244 130 aaKnown RBP17.6■□□□□ 0.41
SMPD1-208ENST00000533123 LIPEQ05469 1076 aa17.6■□□□□ 0.41
SMPD1-208ENST00000533123 GTDC1Q4AE62 458 aa17.6■□□□□ 0.41
SMPD1-208ENST00000533123 C10orf62Q5T681 223 aaPredicted RBP17.6■□□□□ 0.41
SMPD1-208ENST00000533123 MFSD9Q8NBP5 474 aa17.6■□□□□ 0.41
SMPD1-208ENST00000533123 OR2A5Q96R48 311 aa17.6■□□□□ 0.41
SMPD1-208ENST00000533123 YIPF3Q9GZM5 350 aa17.6■□□□□ 0.41
SMPD1-208ENST00000533123 SLC6A13Q9NSD5 602 aa17.6■□□□□ 0.41
SMPD1-208ENST00000533123 DMXL1Q9Y485 3027 aa17.6■□□□□ 0.41
SMPD1-208ENST00000533123 CPNE6O95741 557 aa17.59■□□□□ 0.41
SMPD1-208ENST00000533123 NPPAP01160 153 aa17.59■□□□□ 0.41
SMPD1-208ENST00000533123 HSD17B1P14061 328 aa17.59■□□□□ 0.41
SMPD1-208ENST00000533123 ACADSP16219 412 aa17.59■□□□□ 0.41
SMPD1-208ENST00000533123 ATP6V1B2P21281 511 aa17.59■□□□□ 0.41
SMPD1-208ENST00000533123 GSK3BP49841 420 aa17.59■□□□□ 0.41
SMPD1-208ENST00000533123 SEPHS1P49903 392 aa17.59■□□□□ 0.41
SMPD1-208ENST00000533123 PHEXP78562 749 aa17.59■□□□□ 0.41
SMPD1-208ENST00000533123 TRAP1Q12931 704 aaKnown RBP17.59■□□□□ 0.41
SMPD1-208ENST00000533123 HKDC1Q2TB90 917 aa17.59■□□□□ 0.41
SMPD1-208ENST00000533123 C11orf91Q3C1V1 193 aa17.59■□□□□ 0.41
SMPD1-208ENST00000533123 SPIN4Q56A73 249 aa17.59■□□□□ 0.41
SMPD1-208ENST00000533123 FRMPD2BQ6IN97 320 aa17.59■□□□□ 0.41
SMPD1-208ENST00000533123 ANKRD26P1Q6NSI1 321 aa17.59■□□□□ 0.41
SMPD1-208ENST00000533123 ZNF574Q6ZN55 896 aaPredicted RBP17.59■□□□□ 0.41
SMPD1-208ENST00000533123 MSRB3Q8IXL7 192 aa17.59■□□□□ 0.41
SMPD1-208ENST00000533123 CREB3L4Q8TEY5 395 aa17.59■□□□□ 0.41
SMPD1-208ENST00000533123 TESCQ96BS2 214 aa17.59■□□□□ 0.41
SMPD1-208ENST00000533123 CD180Q99467 661 aa17.59■□□□□ 0.41
SMPD1-208ENST00000533123 ZFYVE21Q9BQ24 234 aa17.59■□□□□ 0.41
SMPD1-208ENST00000533123 ALG2Q9H553 416 aa17.59■□□□□ 0.41
SMPD1-208ENST00000533123 SLC25A37Q9NYZ2 338 aa17.59■□□□□ 0.41
SMPD1-208ENST00000533123 AP1M2Q9Y6Q5 423 aa17.59■□□□□ 0.41
SMPD1-208ENST00000533123 MN1Q10571 1320 aaPredicted RBP17.59■□□□□ 0.41
SMPD1-208ENST00000533123 LOC105369274A0A096LPK9 316 aa17.59■□□□□ 0.41
SMPD1-208ENST00000533123 LOC102723532A0A0G2JNH3 316 aa17.59■□□□□ 0.41
SMPD1-208ENST00000533123 MYO1DO94832 1006 aa17.59■□□□□ 0.41
SMPD1-208ENST00000533123 ANXA4P09525 319 aaPredicted RBP17.59■□□□□ 0.41
SMPD1-208ENST00000533123 SPTBP11277 2137 aa17.59■□□□□ 0.41
SMPD1-208ENST00000533123 PRPS1L1P21108 318 aa17.59■□□□□ 0.41
SMPD1-208ENST00000533123 AHRP35869 848 aa17.59■□□□□ 0.41
SMPD1-208ENST00000533123 MRPS35P82673 323 aaKnown RBP17.59■□□□□ 0.41
SMPD1-208ENST00000533123 UGT8Q16880 541 aa17.59■□□□□ 0.41
SMPD1-208ENST00000533123 DEFB110Q30KQ9 67 aa17.59■□□□□ 0.41
SMPD1-208ENST00000533123 TMEM71Q6P5X7 295 aa17.59■□□□□ 0.41
SMPD1-208ENST00000533123 COMMD6Q7Z4G1 85 aa17.59■□□□□ 0.41
SMPD1-208ENST00000533123 VN1R4Q7Z5H5 301 aa17.59■□□□□ 0.41
SMPD1-208ENST00000533123 DHFR2Q86XF0 187 aa17.59■□□□□ 0.41
SMPD1-208ENST00000533123 FAM9CQ8IZT9 166 aa17.59■□□□□ 0.41
SMPD1-208ENST00000533123 OR4N4Q8N0Y3 316 aa17.59■□□□□ 0.41
SMPD1-208ENST00000533123 TTLQ8NG68 377 aa17.59■□□□□ 0.41
SMPD1-208ENST00000533123 WDR48Q8TAF3 677 aa17.59■□□□□ 0.41
SMPD1-208ENST00000533123 DNAJC9Q8WXX5 260 aa17.59■□□□□ 0.41
SMPD1-208ENST00000533123 INPP5KQ9BT40 448 aa17.59■□□□□ 0.41
SMPD1-208ENST00000533123 SERHLQ9NQF3 203 aa17.59■□□□□ 0.41
SMPD1-208ENST00000533123 SOHLH2Q9NX45 425 aa17.59■□□□□ 0.41
SMPD1-208ENST00000533123 BCAP29Q9UHQ4 241 aa17.59■□□□□ 0.41
SMPD1-208ENST00000533123 ADGRE2Q9UHX3 823 aa17.59■□□□□ 0.41
SMPD1-208ENST00000533123 ENO4A6NNW6 628 aa17.58■□□□□ 0.4
SMPD1-208ENST00000533123 NDUFS4O43181 175 aa17.58■□□□□ 0.4
SMPD1-208ENST00000533123 PCDH7O60245 1069 aa17.58■□□□□ 0.4
SMPD1-208ENST00000533123 CBFA2T3O75081 653 aa17.58■□□□□ 0.4
SMPD1-208ENST00000533123 ACP1P24666 158 aa17.58■□□□□ 0.4
SMPD1-208ENST00000533123 TIA1P31483 386 aaKnown RBP eCLIP17.58■□□□□ 0.4
SMPD1-208ENST00000533123 SQSTM1Q13501 440 aa17.58■□□□□ 0.4
SMPD1-208ENST00000533123 COL9A2Q14055 689 aaPredicted RBP17.58■□□□□ 0.4
SMPD1-208ENST00000533123 OR4F3Q6IEY1 312 aa17.58■□□□□ 0.4
SMPD1-208ENST00000533123 TCTN2Q96GX1 697 aa17.58■□□□□ 0.4
SMPD1-208ENST00000533123 F2RL3Q96RI0 385 aa17.58■□□□□ 0.4
SMPD1-208ENST00000533123 KCTD14Q9BQ13 255 aaPredicted RBP17.58■□□□□ 0.4
SMPD1-208ENST00000533123 MS4A8Q9BY19 250 aa17.58■□□□□ 0.4
SMPD1-208ENST00000533123 NMRK1Q9NWW6 199 aa17.58■□□□□ 0.4
SMPD1-208ENST00000533123 GVINP1Q7Z2Y8 2422 aa17.58■□□□□ 0.4
SMPD1-208ENST00000533123 FAM186AA6NE01 2351 aa17.58■□□□□ 0.4
SMPD1-208ENST00000533123 GNG14A0A1W2PPG7 69 aa17.57■□□□□ 0.4
SMPD1-208ENST00000533123 CLEC3AO75596 197 aa17.57■□□□□ 0.4
SMPD1-208ENST00000533123 PTX3P26022 381 aaPredicted RBP17.57■□□□□ 0.4
SMPD1-208ENST00000533123 VHLP40337 213 aa17.57■□□□□ 0.4
SMPD1-208ENST00000533123 RNF44Q7L0R7 432 aa17.57■□□□□ 0.4
SMPD1-208ENST00000533123 TRPV3Q8NET8 790 aa17.57■□□□□ 0.4
SMPD1-208ENST00000533123 METTL2AQ96IZ6 378 aaKnown RBP17.57■□□□□ 0.4
SMPD1-208ENST00000533123 SORBS1Q9BX66 1292 aaKnown RBP17.57■□□□□ 0.4
SMPD1-208ENST00000533123 REXO4Q9GZR2 422 aaKnown RBP17.57■□□□□ 0.4
SMPD1-208ENST00000533123 IKZF5Q9H5V7 419 aa17.57■□□□□ 0.4
SMPD1-208ENST00000533123 HCN4Q9Y3Q4 1203 aa17.57■□□□□ 0.4
SMPD1-208ENST00000533123 COL5A1P20908 1838 aaPredicted RBP17.57■□□□□ 0.4
SMPD1-208ENST00000533123 PTPRZ1P23471 2315 aaPredicted RBP17.57■□□□□ 0.4
SMPD1-208ENST00000533123 PCNX2A6NKB5 2137 aa17.57■□□□□ 0.4
SMPD1-208ENST00000533123 PROB1E7EW31 1015 aa17.57■□□□□ 0.4
SMPD1-208ENST00000533123 ZBTB11O95625 1053 aaPredicted RBP17.57■□□□□ 0.4
SMPD1-208ENST00000533123 EIF2S1P05198 315 aaKnown RBP17.57■□□□□ 0.4
SMPD1-208ENST00000533123 GSNP06396 782 aa17.57■□□□□ 0.4
SMPD1-208ENST00000533123 COX7A2P14406 83 aa17.57■□□□□ 0.4
SMPD1-208ENST00000533123 SERPINB1P30740 379 aa17.57■□□□□ 0.4
SMPD1-208ENST00000533123 CDKN2CP42773 168 aa17.57■□□□□ 0.4
SMPD1-208ENST00000533123 RELAQ04206 551 aa17.57■□□□□ 0.4
SMPD1-208ENST00000533123 PAIP1Q9H074 479 aaKnown RBP17.57■□□□□ 0.4
SMPD1-208ENST00000533123 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms