RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 RORAP35398 523 aa11.86□□□□□ -0.51
COPB1-208ENST00000532088 AVPR1BP47901 424 aa11.86□□□□□ -0.51
COPB1-208ENST00000532088 RAP1GDS1P52306 607 aa11.86□□□□□ -0.51
COPB1-208ENST00000532088 MAPK10P53779 464 aa11.86□□□□□ -0.51
COPB1-208ENST00000532088 GYS2P54840 703 aa11.86□□□□□ -0.51
COPB1-208ENST00000532088 MTTPP55157 894 aa11.86□□□□□ -0.51
COPB1-208ENST00000532088 GABREP78334 506 aa11.86□□□□□ -0.51
COPB1-208ENST00000532088 IRX1P78414 480 aaPredicted RBP11.86□□□□□ -0.51
COPB1-208ENST00000532088 MAD2L1Q13257 205 aaPredicted RBP11.86□□□□□ -0.51
COPB1-208ENST00000532088 KIAA0040Q15053 153 aa11.86□□□□□ -0.51
COPB1-208ENST00000532088 PDCD2Q16342 344 aaPredicted RBP11.86□□□□□ -0.51
COPB1-208ENST00000532088 ATP6AP1LQ52LC2 224 aa11.86□□□□□ -0.51
COPB1-208ENST00000532088 OR4C11Q6IEV9 310 aa11.86□□□□□ -0.51
COPB1-208ENST00000532088 OGFOD2Q6N063 350 aa11.86□□□□□ -0.51
COPB1-208ENST00000532088 FOXR1Q6PIV2 292 aa11.86□□□□□ -0.51
COPB1-208ENST00000532088 EPGNQ6UW88 154 aa11.86□□□□□ -0.51
COPB1-208ENST00000532088 MED25Q71SY5 747 aa11.86□□□□□ -0.51
COPB1-208ENST00000532088 DGLUCYQ7Z3D6 616 aa11.86□□□□□ -0.51
COPB1-208ENST00000532088 UBE3DQ7Z6J8 389 aa11.86□□□□□ -0.51
COPB1-208ENST00000532088 NUDT13Q86X67 352 aa11.86□□□□□ -0.51
COPB1-208ENST00000532088 ZFAND4Q86XD8 727 aa11.86□□□□□ -0.51
COPB1-208ENST00000532088 ACTRT2Q8TDY3 377 aa11.86□□□□□ -0.51
COPB1-208ENST00000532088 ADAMTS18Q8TE60 1221 aa11.86□□□□□ -0.51
COPB1-208ENST00000532088 HSH2DQ96JZ2 352 aa11.86□□□□□ -0.51
COPB1-208ENST00000532088 F2RL3Q96RI0 385 aa11.86□□□□□ -0.51
COPB1-208ENST00000532088 C17orf62Q9BQA9 187 aa11.86□□□□□ -0.51
COPB1-208ENST00000532088 ZNF717Q9BY31 904 aaPredicted RBP11.86□□□□□ -0.51
COPB1-208ENST00000532088 NUF2Q9BZD4 464 aa11.86□□□□□ -0.51
COPB1-208ENST00000532088 SLC7A5P2Q9GIP4 190 aa11.86□□□□□ -0.51
COPB1-208ENST00000532088 KLHL31Q9H511 634 aa11.86□□□□□ -0.51
COPB1-208ENST00000532088 LRTM1Q9HBL6 345 aa11.86□□□□□ -0.51
COPB1-208ENST00000532088 PRDM7Q9NQW5 492 aa11.86□□□□□ -0.51
COPB1-208ENST00000532088 TXLNGQ9NUQ3 528 aa11.86□□□□□ -0.51
COPB1-208ENST00000532088 FGFR1OP2Q9NVK5 253 aa11.86□□□□□ -0.51
COPB1-208ENST00000532088 C1orf109Q9NX04 203 aa11.86□□□□□ -0.51
COPB1-208ENST00000532088 ASIC5Q9NY37 505 aa11.86□□□□□ -0.51
COPB1-208ENST00000532088 MARCOQ9UEW3 520 aaPredicted RBP11.86□□□□□ -0.51
COPB1-208ENST00000532088 ADAM21Q9UKJ8 722 aa11.86□□□□□ -0.51
COPB1-208ENST00000532088 WBP11Q9Y2W2 641 aaKnown RBP11.86□□□□□ -0.51
COPB1-208ENST00000532088 B3GALT1Q9Y5Z6 326 aa11.86□□□□□ -0.51
COPB1-208ENST00000532088 CNOT1A5YKK6 2376 aaKnown RBP11.86□□□□□ -0.51
COPB1-208ENST00000532088 WDR87Q6ZQQ6 2873 aa11.86□□□□□ -0.51
COPB1-208ENST00000532088 FAM149AA5PLN7 773 aa11.85□□□□□ -0.51
COPB1-208ENST00000532088 SDHDO14521 159 aa11.85□□□□□ -0.51
COPB1-208ENST00000532088 FOXS1O43638 330 aa11.85□□□□□ -0.51
COPB1-208ENST00000532088 TNFSF15O95150 251 aa11.85□□□□□ -0.51
COPB1-208ENST00000532088 TIAF1O95411 115 aa11.85□□□□□ -0.51
COPB1-208ENST00000532088 ZNF888P0CJ79 500 aaPredicted RBP11.85□□□□□ -0.51
COPB1-208ENST00000532088 IL10P22301 178 aa11.85□□□□□ -0.51
COPB1-208ENST00000532088 HIST1H1TP22492 207 aaPredicted RBP11.85□□□□□ -0.51
COPB1-208ENST00000532088 ATP5A1P25705 553 aaKnown RBP11.85□□□□□ -0.51
COPB1-208ENST00000532088 BSGP35613 385 aa11.85□□□□□ -0.51
COPB1-208ENST00000532088 TRA2BP62995 288 aaKnown RBP11.85□□□□□ -0.51
COPB1-208ENST00000532088 HMGCS1Q01581 520 aa11.85□□□□□ -0.51
COPB1-208ENST00000532088 ACSM2AQ08AH3 577 aa11.85□□□□□ -0.51
COPB1-208ENST00000532088 AP5B1Q2VPB7 878 aa11.85□□□□□ -0.51
COPB1-208ENST00000532088 ZNF385CQ66K41 422 aaPredicted RBP11.85□□□□□ -0.51
COPB1-208ENST00000532088 ACSM2BQ68CK6 577 aa11.85□□□□□ -0.51
COPB1-208ENST00000532088 ZNF517Q6ZMY9 492 aaPredicted RBP11.85□□□□□ -0.51
COPB1-208ENST00000532088 TTLL10Q6ZVT0 673 aa11.85□□□□□ -0.51
COPB1-208ENST00000532088 LARP4Q71RC2 724 aaKnown RBP eCLIP11.85□□□□□ -0.514e-8■□□□□ 9
COPB1-208ENST00000532088 RNF175Q8N4F7 328 aa11.85□□□□□ -0.51
COPB1-208ENST00000532088 OR2T11Q8NH01 316 aa11.85□□□□□ -0.51
COPB1-208ENST00000532088 TUBGCP3Q96CW5 907 aa11.85□□□□□ -0.51
COPB1-208ENST00000532088 NXPE2Q96DL1 559 aa11.85□□□□□ -0.51
COPB1-208ENST00000532088 GBP5Q96PP8 586 aa11.85□□□□□ -0.51
COPB1-208ENST00000532088 HBEGFQ99075 208 aa11.85□□□□□ -0.51
COPB1-208ENST00000532088 CTRCQ99895 268 aa11.85□□□□□ -0.51
COPB1-208ENST00000532088 CCDC28BQ9BUN5 200 aa11.85□□□□□ -0.51
COPB1-208ENST00000532088 ULBP3Q9BZM4 244 aa11.85□□□□□ -0.51
COPB1-208ENST00000532088 COPS7BQ9H9Q2 264 aaPredicted RBP11.85□□□□□ -0.51
COPB1-208ENST00000532088 LYRM4Q9HD34 91 aa11.85□□□□□ -0.51
COPB1-208ENST00000532088 LHX9Q9NQ69 397 aa11.85□□□□□ -0.51
COPB1-208ENST00000532088 STARD5Q9NSY2 213 aa11.85□□□□□ -0.51
COPB1-208ENST00000532088 LYARQ9NX58 379 aaKnown RBP11.85□□□□□ -0.51
COPB1-208ENST00000532088 KLHL14Q9P2G3 628 aa11.85□□□□□ -0.51
COPB1-208ENST00000532088 MCM8Q9UJA3 840 aa11.85□□□□□ -0.51
COPB1-208ENST00000532088 MSRB2Q9Y3D2 182 aa11.85□□□□□ -0.51
COPB1-208ENST00000532088 A0A0A6YYD5 115 aa11.84□□□□□ -0.51
COPB1-208ENST00000532088 BLACEA4D250 179 aa11.84□□□□□ -0.51
COPB1-208ENST00000532088 C4orf51C9J302 202 aa11.84□□□□□ -0.51
COPB1-208ENST00000532088 TGFBR3LH3BV60 316 aa11.84□□□□□ -0.51
COPB1-208ENST00000532088 ATXN7O15265 892 aaPredicted RBP11.84□□□□□ -0.51
COPB1-208ENST00000532088 B3GALT2O43825 422 aa11.84□□□□□ -0.51
COPB1-208ENST00000532088 STK17BO94768 372 aa11.84□□□□□ -0.51
COPB1-208ENST00000532088 MYO1DO94832 1006 aa11.84□□□□□ -0.51
COPB1-208ENST00000532088 KIAA0754O94854 1291 aa11.84□□□□□ -0.51
COPB1-208ENST00000532088 KLHL18O94889 574 aa11.84□□□□□ -0.51
COPB1-208ENST00000532088 MED26O95402 600 aa11.84□□□□□ -0.51
COPB1-208ENST00000532088 ALBP02768 609 aa11.84□□□□□ -0.51
COPB1-208ENST00000532088 JUNP05412 331 aaKnown RBP11.84□□□□□ -0.51
COPB1-208ENST00000532088 KLK3P07288 261 aaPredicted RBP11.84□□□□□ -0.51
COPB1-208ENST00000532088 ADRB1P08588 477 aa11.84□□□□□ -0.51
COPB1-208ENST00000532088 CD63P08962 238 aa11.84□□□□□ -0.51
COPB1-208ENST00000532088 LBPP18428 481 aa11.84□□□□□ -0.51
COPB1-208ENST00000532088 MAPK1P28482 360 aa11.84□□□□□ -0.51
COPB1-208ENST00000532088 SSR2P43308 183 aa11.84□□□□□ -0.51
COPB1-208ENST00000532088 PLA2G16P53816 162 aa11.84□□□□□ -0.51
COPB1-208ENST00000532088 RAB8AP61006 207 aa11.84□□□□□ -0.51
COPB1-208ENST00000532088 BTN3A2P78410 334 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms