RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 SAYSD1Q9NPB0 183 aa15.71■□□□□ 0.11
CPSF1-207ENST00000531727 PRTFDC1Q9NRG1 225 aa15.71■□□□□ 0.11
CPSF1-207ENST00000531727 PNO1Q9NRX1 252 aaKnown RBP15.71■□□□□ 0.11
CPSF1-207ENST00000531727 DNAJC11Q9NVH1 559 aa15.71■□□□□ 0.11
CPSF1-207ENST00000531727 WHRNQ9P202 907 aa15.71■□□□□ 0.11
CPSF1-207ENST00000531727 TXNDC16Q9P2K2 825 aa15.71■□□□□ 0.11
CPSF1-207ENST00000531727 PPIEQ9UNP9 301 aaKnown RBP15.71■□□□□ 0.11
CPSF1-207ENST00000531727 MEMO1Q9Y316 297 aa15.71■□□□□ 0.11
CPSF1-207ENST00000531727 FAM187AA6NFU0 413 aa15.7■□□□□ 0.1
CPSF1-207ENST00000531727 ANKDD1BA6NHY2 528 aa15.7■□□□□ 0.1
CPSF1-207ENST00000531727 TGFBR3LH3BV60 316 aa15.7■□□□□ 0.1
CPSF1-207ENST00000531727 CLDN4O14493 209 aa15.7■□□□□ 0.1
CPSF1-207ENST00000531727 CLGNO14967 610 aa15.7■□□□□ 0.1
CPSF1-207ENST00000531727 FANCGO15287 622 aa15.7■□□□□ 0.1
CPSF1-207ENST00000531727 EIF3HO15372 352 aaKnown RBP eCLIP15.7■□□□□ 0.1
CPSF1-207ENST00000531727 PHGDHO43175 533 aaKnown RBP15.7■□□□□ 0.1
CPSF1-207ENST00000531727 B3GALT2O43825 422 aa15.7■□□□□ 0.1
CPSF1-207ENST00000531727 CD1DP15813 335 aa15.7■□□□□ 0.1
CPSF1-207ENST00000531727 STMN1P16949 149 aa15.7■□□□□ 0.1
CPSF1-207ENST00000531727 HSPA7P48741 367 aa15.7■□□□□ 0.1
CPSF1-207ENST00000531727 HNRNPFP52597 415 aaKnown RBP15.7■□□□□ 0.1
CPSF1-207ENST00000531727 PLA2G16P53816 162 aa15.7■□□□□ 0.1
CPSF1-207ENST00000531727 ATP6V0D1P61421 351 aa15.7■□□□□ 0.1
CPSF1-207ENST00000531727 MRPS25P82663 173 aaKnown RBP15.7■□□□□ 0.1
CPSF1-207ENST00000531727 SULT1C3Q6IMI6 304 aa15.7■□□□□ 0.1
CPSF1-207ENST00000531727 TRIM40Q6P9F5 258 aa15.7■□□□□ 0.1
CPSF1-207ENST00000531727 ZNF595Q8IYB9 648 aa15.7■□□□□ 0.1
CPSF1-207ENST00000531727 FAM47BQ8NA70 645 aa15.7■□□□□ 0.1
CPSF1-207ENST00000531727 POGLUT1Q8NBL1 392 aa15.7■□□□□ 0.1
CPSF1-207ENST00000531727 TMEM52Q8NDY8 209 aa15.7■□□□□ 0.1
CPSF1-207ENST00000531727 WDR34Q96EX3 536 aa15.7■□□□□ 0.1
CPSF1-207ENST00000531727 VMP1Q96GC9 406 aa15.7■□□□□ 0.1
CPSF1-207ENST00000531727 SERINC2Q96SA4 455 aa15.7■□□□□ 0.1
CPSF1-207ENST00000531727 RBBP8Q99708 897 aa15.7■□□□□ 0.1
CPSF1-207ENST00000531727 CPNE1Q99829 537 aa15.7■□□□□ 0.1
CPSF1-207ENST00000531727 ERP44Q9BS26 406 aa15.7■□□□□ 0.1
CPSF1-207ENST00000531727 REXO4Q9GZR2 422 aaKnown RBP15.7■□□□□ 0.1
CPSF1-207ENST00000531727 DPH5Q9H2P9 285 aa15.7■□□□□ 0.1
CPSF1-207ENST00000531727 FBXW2Q9UKT8 454 aa15.7■□□□□ 0.1
CPSF1-207ENST00000531727 MRPS33Q9Y291 106 aaKnown RBP15.7■□□□□ 0.1
CPSF1-207ENST00000531727 KLF13Q9Y2Y9 288 aaPredicted RBP15.7■□□□□ 0.1
CPSF1-207ENST00000531727 CLDN16Q9Y5I7 305 aa15.7■□□□□ 0.1
CPSF1-207ENST00000531727 NCOA6Q14686 2063 aaPredicted RBP15.7■□□□□ 0.1
CPSF1-207ENST00000531727 TCRBV9S1A1TA0A576 114 aa15.69■□□□□ 0.1
CPSF1-207ENST00000531727 SYNDIG1LA6NDD5 238 aa15.69■□□□□ 0.1
CPSF1-207ENST00000531727 FAM159BA6NKW6 160 aa15.69■□□□□ 0.1
CPSF1-207ENST00000531727 PRAMEF4O60810 478 aa15.69■□□□□ 0.1
CPSF1-207ENST00000531727 STK16O75716 305 aa15.69■□□□□ 0.1
CPSF1-207ENST00000531727 ABOP16442 354 aa15.69■□□□□ 0.1
CPSF1-207ENST00000531727 TFEBP19484 476 aa15.69■□□□□ 0.1
CPSF1-207ENST00000531727 PPP2R1BP30154 601 aa15.69■□□□□ 0.1
CPSF1-207ENST00000531727 PTGER4P35408 488 aa15.69■□□□□ 0.1
CPSF1-207ENST00000531727 GP5P40197 560 aa15.69■□□□□ 0.1
CPSF1-207ENST00000531727 HSF1Q00613 529 aa15.69■□□□□ 0.1
CPSF1-207ENST00000531727 SLC13A2Q13183 592 aa15.69■□□□□ 0.1
CPSF1-207ENST00000531727 OR4D1Q15615 310 aa15.69■□□□□ 0.1
CPSF1-207ENST00000531727 PDK4Q16654 411 aa15.69■□□□□ 0.1
CPSF1-207ENST00000531727 FBXO48Q5FWF7 155 aa15.69■□□□□ 0.1
CPSF1-207ENST00000531727 PRAMEF9Q5VWM5 478 aa15.69■□□□□ 0.1
CPSF1-207ENST00000531727 ADNP2Q6IQ32 1131 aa15.69■□□□□ 0.1
CPSF1-207ENST00000531727 ABHD17CQ6PCB6 329 aa15.69■□□□□ 0.1
CPSF1-207ENST00000531727 CYS1Q717R9 158 aa15.69■□□□□ 0.1
CPSF1-207ENST00000531727 CHERPQ8IWX8 916 aaKnown RBP15.69■□□□□ 0.1
CPSF1-207ENST00000531727 CYP4Z2PQ8N1L4 340 aa15.69■□□□□ 0.1
CPSF1-207ENST00000531727 SNX31Q8N9S9 440 aa15.69■□□□□ 0.1
CPSF1-207ENST00000531727 PDPRQ8NCN5 879 aa15.69■□□□□ 0.1
CPSF1-207ENST00000531727 NCLNQ969V3 563 aa15.69■□□□□ 0.1
CPSF1-207ENST00000531727 ESAMQ96AP7 390 aa15.69■□□□□ 0.1
CPSF1-207ENST00000531727 PTCD3Q96EY7 689 aaKnown RBP15.69■□□□□ 0.1
CPSF1-207ENST00000531727 EFCAB11Q9BUY7 163 aa15.69■□□□□ 0.1
CPSF1-207ENST00000531727 ADAP2Q9NPF8 381 aa15.69■□□□□ 0.1
CPSF1-207ENST00000531727 ZNF223Q9UK11 482 aaPredicted RBP15.69■□□□□ 0.1
CPSF1-207ENST00000531727 PTBP2Q9UKA9 531 aaKnown RBP15.69■□□□□ 0.1
CPSF1-207ENST00000531727 ZNF490Q9ULM2 529 aaPredicted RBP15.69■□□□□ 0.1
CPSF1-207ENST00000531727 PYCARDQ9ULZ3 195 aa15.69■□□□□ 0.1
CPSF1-207ENST00000531727 ZNHIT1O43257 154 aa15.68■□□□□ 0.1
CPSF1-207ENST00000531727 ITGA10O75578 1167 aa15.68■□□□□ 0.1
CPSF1-207ENST00000531727 COX6B1P14854 86 aa15.68■□□□□ 0.1
CPSF1-207ENST00000531727 CD22P20273 847 aa15.68■□□□□ 0.1
CPSF1-207ENST00000531727 CERS1P27544 350 aa15.68■□□□□ 0.1
CPSF1-207ENST00000531727 MEOX1P50221 254 aa15.68■□□□□ 0.1
CPSF1-207ENST00000531727 GPR143P51810 404 aa15.68■□□□□ 0.1
CPSF1-207ENST00000531727 MTTPP55157 894 aa15.68■□□□□ 0.1
CPSF1-207ENST00000531727 LIM2P55344 173 aa15.68■□□□□ 0.1
CPSF1-207ENST00000531727 RAB10P61026 200 aa15.68■□□□□ 0.1
CPSF1-207ENST00000531727 LAPTM5Q13571 262 aa15.68■□□□□ 0.1
CPSF1-207ENST00000531727 DOC2AQ14183 400 aa15.68■□□□□ 0.1
CPSF1-207ENST00000531727 ZKSCAN8Q15776 578 aaPredicted RBP15.68■□□□□ 0.1
CPSF1-207ENST00000531727 XKR6Q5GH73 641 aa15.68■□□□□ 0.1
CPSF1-207ENST00000531727 MAATS1Q7Z4T9 603 aa15.68■□□□□ 0.1
CPSF1-207ENST00000531727 FGD2Q7Z6J4 655 aa15.68■□□□□ 0.1
CPSF1-207ENST00000531727 DOLPP1Q86YN1 238 aa15.68■□□□□ 0.1
CPSF1-207ENST00000531727 SULF2Q8IWU5 870 aa15.68■□□□□ 0.1
CPSF1-207ENST00000531727 AGAP11Q8TF27 550 aa15.68■□□□□ 0.1
CPSF1-207ENST00000531727 KIAA1191Q96A73 305 aa15.68■□□□□ 0.1
CPSF1-207ENST00000531727 UBXN10Q96LJ8 280 aa15.68■□□□□ 0.1
CPSF1-207ENST00000531727 PHF12Q96QT6 1004 aa15.68■□□□□ 0.1
CPSF1-207ENST00000531727 CSF3RQ99062 836 aa15.68■□□□□ 0.1
CPSF1-207ENST00000531727 CCDC77Q9BR77 488 aa15.68■□□□□ 0.1
CPSF1-207ENST00000531727 COPS7BQ9H9Q2 264 aaPredicted RBP15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms