RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 ARL15Q9NXU5 204 aa8.59□□□□□ -1.03
NEDD8-206ENST00000531430 RPH3AQ9Y2J0 694 aaPredicted RBP8.59□□□□□ -1.03
NEDD8-206ENST00000531430 DYRK1BQ9Y463 629 aa8.59□□□□□ -1.03
NEDD8-206ENST00000531430 LIPGQ9Y5X9 500 aa8.59□□□□□ -1.03
NEDD8-206ENST00000531430 MAD1L1Q9Y6D9 718 aa8.59□□□□□ -1.03
NEDD8-206ENST00000531430 COMMD10Q9Y6G5 202 aa8.59□□□□□ -1.03
NEDD8-206ENST00000531430 MPDZO75970 2070 aa8.58□□□□□ -1.04
NEDD8-206ENST00000531430 PHF3Q92576 2039 aaKnown RBP8.58□□□□□ -1.04
NEDD8-206ENST00000531430 A0A0G2JMM0 328 aa8.58□□□□□ -1.04
NEDD8-206ENST00000531430 A0A1W2PPB8 328 aa8.58□□□□□ -1.04
NEDD8-206ENST00000531430 A0A1W2PRS3 328 aa8.58□□□□□ -1.04
NEDD8-206ENST00000531430 TRBC2A0A5B9 178 aa8.58□□□□□ -1.04
NEDD8-206ENST00000531430 MAGEB16A2A368 324 aa8.58□□□□□ -1.04
NEDD8-206ENST00000531430 SDR42E2A6NKP2 422 aa8.58□□□□□ -1.04
NEDD8-206ENST00000531430 KIR3DP1A8MWS1 328 aa8.58□□□□□ -1.04
NEDD8-206ENST00000531430 CLDN4O14493 209 aa8.58□□□□□ -1.04
NEDD8-206ENST00000531430 PRKNO60260 465 aaPredicted RBP8.58□□□□□ -1.04
NEDD8-206ENST00000531430 P04436 131 aa8.58□□□□□ -1.04
NEDD8-206ENST00000531430 C8GP07360 202 aa8.58□□□□□ -1.04
NEDD8-206ENST00000531430 SOX3P41225 446 aa8.58□□□□□ -1.04
NEDD8-206ENST00000531430 DNASE1L1P49184 302 aa8.58□□□□□ -1.04
NEDD8-206ENST00000531430 GPS1Q13098 491 aa8.58□□□□□ -1.04
NEDD8-206ENST00000531430 RTL6Q6ICC9 239 aa8.58□□□□□ -1.04
NEDD8-206ENST00000531430 PAQR3Q6TCH7 311 aa8.58□□□□□ -1.04
NEDD8-206ENST00000531430 RGS9BPQ6ZS82 235 aa8.58□□□□□ -1.04
NEDD8-206ENST00000531430 GK5Q6ZS86 529 aa8.58□□□□□ -1.04
NEDD8-206ENST00000531430 TRILQ7L0X0 811 aa8.58□□□□□ -1.04
NEDD8-206ENST00000531430 BIVMQ86UB2 503 aa8.58□□□□□ -1.04
NEDD8-206ENST00000531430 CA13Q8N1Q1 262 aa8.58□□□□□ -1.04
NEDD8-206ENST00000531430 TXLNBQ8N3L3 684 aa8.58□□□□□ -1.04
NEDD8-206ENST00000531430 TMEM251Q8N6I4 163 aa8.58□□□□□ -1.04
NEDD8-206ENST00000531430 APCDD1LQ8NCL9 501 aa8.58□□□□□ -1.04
NEDD8-206ENST00000531430 WFDC11Q8NEX6 87 aa8.58□□□□□ -1.04
NEDD8-206ENST00000531430 KCNJ9Q92806 393 aa8.58□□□□□ -1.04
NEDD8-206ENST00000531430 LINGO1Q96FE5 620 aa8.58□□□□□ -1.04
NEDD8-206ENST00000531430 LRRC46Q96FV0 321 aa8.58□□□□□ -1.04
NEDD8-206ENST00000531430 CAPZA3Q96KX2 299 aa8.58□□□□□ -1.04
NEDD8-206ENST00000531430 FAM173AQ9BQD7 235 aa8.58□□□□□ -1.04
NEDD8-206ENST00000531430 TTTY12Q9BZ98 90 aa8.58□□□□□ -1.04
NEDD8-206ENST00000531430 PLSCR2Q9NRY7 297 aa8.58□□□□□ -1.04
NEDD8-206ENST00000531430 IARS2Q9NSE4 1012 aaKnown RBP8.58□□□□□ -1.04
NEDD8-206ENST00000531430 KLHL42Q9P2K6 505 aa8.58□□□□□ -1.04
NEDD8-206ENST00000531430 ZFP69BQ9UJL9 534 aa8.58□□□□□ -1.04
NEDD8-206ENST00000531430 CLCA3PQ9Y6N3 262 aa8.58□□□□□ -1.04
NEDD8-206ENST00000531430 FLNAP21333 2647 aaKnown RBP8.57□□□□□ -1.04
NEDD8-206ENST00000531430 TRGV5A0A0B4J1U4 118 aa8.57□□□□□ -1.04
NEDD8-206ENST00000531430 OR14I1A6ND48 311 aa8.57□□□□□ -1.04
NEDD8-206ENST00000531430 A6NNC1 897 aa8.57□□□□□ -1.04
NEDD8-206ENST00000531430 NRDCO43847 1150 aa8.57□□□□□ -1.04
NEDD8-206ENST00000531430 H2AFYO75367 372 aaKnown RBP8.57□□□□□ -1.04
NEDD8-206ENST00000531430 CELA3AP09093 270 aa8.57□□□□□ -1.04
NEDD8-206ENST00000531430 BMP5P22003 454 aa8.57□□□□□ -1.04
NEDD8-206ENST00000531430 SLC1A2P43004 574 aa8.57□□□□□ -1.04
NEDD8-206ENST00000531430 CCZ1BP86790 482 aa8.57□□□□□ -1.04
NEDD8-206ENST00000531430 CCZ1P86791 482 aaPredicted RBP8.57□□□□□ -1.04
NEDD8-206ENST00000531430 CDK16Q00536 496 aa8.57□□□□□ -1.04
NEDD8-206ENST00000531430 SLC25A35Q3KQZ1 300 aa8.57□□□□□ -1.04
NEDD8-206ENST00000531430 HSP90AA5PQ58FG0 334 aa8.57□□□□□ -1.04
NEDD8-206ENST00000531430 NDUFAF5Q5TEU4 345 aa8.57□□□□□ -1.04
NEDD8-206ENST00000531430 DUPD1Q68J44 220 aa8.57□□□□□ -1.04
NEDD8-206ENST00000531430 HSDL2Q6YN16 418 aa8.57□□□□□ -1.04
NEDD8-206ENST00000531430 KIAA0408Q6ZU52 694 aa8.57□□□□□ -1.04
NEDD8-206ENST00000531430 CAMKMTQ7Z624 323 aa8.57□□□□□ -1.04
NEDD8-206ENST00000531430 VWA5B2Q8N398 1253 aa8.57□□□□□ -1.04
NEDD8-206ENST00000531430 FAM109AQ8N4B1 249 aa8.57□□□□□ -1.04
NEDD8-206ENST00000531430 TRPV3Q8NET8 790 aa8.57□□□□□ -1.04
NEDD8-206ENST00000531430 NT5CQ8TCD5 201 aa8.57□□□□□ -1.04
NEDD8-206ENST00000531430 NUDT8Q8WV74 236 aa8.57□□□□□ -1.04
NEDD8-206ENST00000531430 SLC5A11Q8WWX8 675 aa8.57□□□□□ -1.04
NEDD8-206ENST00000531430 SARAFQ96BY9 339 aa8.57□□□□□ -1.04
NEDD8-206ENST00000531430 C18orf12Q96KH6 178 aa8.57□□□□□ -1.04
NEDD8-206ENST00000531430 JSRP1Q96MG2 331 aaPredicted RBP8.57□□□□□ -1.04
NEDD8-206ENST00000531430 ALPK1Q96QP1 1244 aa8.57□□□□□ -1.04
NEDD8-206ENST00000531430 BAG1Q99933 345 aaPredicted RBP8.57□□□□□ -1.04
NEDD8-206ENST00000531430 AARSD1Q9BTE6 412 aaKnown RBP8.57□□□□□ -1.04
NEDD8-206ENST00000531430 SGPP1Q9BX95 441 aa8.57□□□□□ -1.04
NEDD8-206ENST00000531430 OR8D2Q9GZM6 311 aa8.57□□□□□ -1.04
NEDD8-206ENST00000531430 SPNS1Q9H2V7 528 aa8.57□□□□□ -1.04
NEDD8-206ENST00000531430 EPB41L4BQ9H329 900 aa8.57□□□□□ -1.04
NEDD8-206ENST00000531430 IL1RL2Q9HB29 575 aa8.57□□□□□ -1.04
NEDD8-206ENST00000531430 DMRT3Q9NQL9 472 aa8.57□□□□□ -1.04
NEDD8-206ENST00000531430 SACM1LQ9NTJ5 587 aa8.57□□□□□ -1.04
NEDD8-206ENST00000531430 TUBA8Q9NY65 449 aaPredicted RBP8.57□□□□□ -1.04
NEDD8-206ENST00000531430 MYOTQ9UBF9 498 aa8.57□□□□□ -1.04
NEDD8-206ENST00000531430 ZNF223Q9UK11 482 aaPredicted RBP8.57□□□□□ -1.04
NEDD8-206ENST00000531430 FBXO5Q9UKT4 447 aa8.57□□□□□ -1.04
NEDD8-206ENST00000531430 GUCA1BQ9UMX6 200 aa8.57□□□□□ -1.04
NEDD8-206ENST00000531430 MED16Q9Y2X0 877 aa8.57□□□□□ -1.04
NEDD8-206ENST00000531430 FAM215AQ9Y5M1 114 aa8.57□□□□□ -1.04
NEDD8-206ENST00000531430 CAPN6Q9Y6Q1 641 aa8.57□□□□□ -1.04
NEDD8-206ENST00000531430 EML6Q6ZMW3 1958 aa8.57□□□□□ -1.04
NEDD8-206ENST00000531430 CTAGE15A4D2H0 777 aa8.56□□□□□ -1.04
NEDD8-206ENST00000531430 TUBAL3A6NHL2 446 aa8.56□□□□□ -1.04
NEDD8-206ENST00000531430 FAM47E-STBD1D6RA91 191 aa8.56□□□□□ -1.04
NEDD8-206ENST00000531430 SYT5O00445 386 aa8.56□□□□□ -1.04
NEDD8-206ENST00000531430 AQP7O14520 342 aa8.56□□□□□ -1.04
NEDD8-206ENST00000531430 WDR1O75083 606 aa8.56□□□□□ -1.04
NEDD8-206ENST00000531430 RAF1P04049 648 aa8.56□□□□□ -1.04
NEDD8-206ENST00000531430 INHBBP09529 407 aa8.56□□□□□ -1.04
NEDD8-206ENST00000531430 TPSB2P20231 275 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms