RNA–Protein interactions for RNA: ENST00000531303.5

SMPD1-205, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,451 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-205ENST00000531303 MIER2Q8N344 545 aa18.05■□□□□ 0.48
SMPD1-205ENST00000531303 OR5T3Q8NGG3 340 aa18.05■□□□□ 0.48
SMPD1-205ENST00000531303 NUDT8Q8WV74 236 aa18.05■□□□□ 0.48
SMPD1-205ENST00000531303 CLIP3Q96DZ5 547 aa18.05■□□□□ 0.48
SMPD1-205ENST00000531303 MMABQ96EY8 250 aaPredicted RBP18.05■□□□□ 0.48
SMPD1-205ENST00000531303 LRRC37BQ96QE4 947 aa18.05■□□□□ 0.48
SMPD1-205ENST00000531303 ACTR5Q9H9F9 607 aaPredicted RBP18.05■□□□□ 0.48
SMPD1-205ENST00000531303 FBXO8Q9NRD0 319 aa18.05■□□□□ 0.48
SMPD1-205ENST00000531303 TXLNGQ9NUQ3 528 aa18.05■□□□□ 0.48
SMPD1-205ENST00000531303 ASIC5Q9NY37 505 aa18.05■□□□□ 0.48
SMPD1-205ENST00000531303 DLL3Q9NYJ7 618 aa18.05■□□□□ 0.48
SMPD1-205ENST00000531303 PTPRBP23467 1997 aa18.04■□□□□ 0.48
SMPD1-205ENST00000531303 B4E171 279 aa18.04■□□□□ 0.48
SMPD1-205ENST00000531303 FGF5P12034 268 aa18.04■□□□□ 0.48
SMPD1-205ENST00000531303 TSPAN7P41732 249 aa18.04■□□□□ 0.48
SMPD1-205ENST00000531303 AVPR1BP47901 424 aa18.04■□□□□ 0.48
SMPD1-205ENST00000531303 ARFIP1P53367 373 aa18.04■□□□□ 0.48
SMPD1-205ENST00000531303 ARSFP54793 590 aa18.04■□□□□ 0.48
SMPD1-205ENST00000531303 EMP3P54852 163 aa18.04■□□□□ 0.48
SMPD1-205ENST00000531303 HNRNPH2P55795 449 aaKnown RBP18.04■□□□□ 0.48
SMPD1-205ENST00000531303 ZNF763Q0D2J5 394 aa18.04■□□□□ 0.48
SMPD1-205ENST00000531303 RUNX2Q13950 521 aa18.04■□□□□ 0.48
SMPD1-205ENST00000531303 CYB5D1Q6P9G0 228 aa18.04■□□□□ 0.48
SMPD1-205ENST00000531303 SHISA5Q8N114 240 aa18.04■□□□□ 0.48
SMPD1-205ENST00000531303 MMP21Q8N119 569 aa18.04■□□□□ 0.48
SMPD1-205ENST00000531303 KRTCAP2Q8N6L1 136 aa18.04■□□□□ 0.48
SMPD1-205ENST00000531303 EFCAB3Q8N7B9 438 aa18.04■□□□□ 0.48
SMPD1-205ENST00000531303 ZDHHC19Q8WVZ1 309 aaPredicted RBP18.04■□□□□ 0.48
SMPD1-205ENST00000531303 RTKNQ9BST9 563 aa18.04■□□□□ 0.48
SMPD1-205ENST00000531303 YIPF2Q9BWQ6 316 aa18.04■□□□□ 0.48
SMPD1-205ENST00000531303 ZNF385DQ9H6B1 395 aa18.04■□□□□ 0.48
SMPD1-205ENST00000531303 HCN3Q9P1Z3 774 aa18.04■□□□□ 0.48
SMPD1-205ENST00000531303 A0A1W2PNU3 283 aaPredicted RBP18.03■□□□□ 0.48
SMPD1-205ENST00000531303 PSMD12O00232 456 aaPredicted RBP18.03■□□□□ 0.48
SMPD1-205ENST00000531303 PLD2O14939 933 aa18.03■□□□□ 0.48
SMPD1-205ENST00000531303 IL3P08700 152 aa18.03■□□□□ 0.48
SMPD1-205ENST00000531303 CD1EP15812 388 aa18.03■□□□□ 0.48
SMPD1-205ENST00000531303 TSFMP43897 325 aaKnown RBP18.03■□□□□ 0.48
SMPD1-205ENST00000531303 OR1D4P47884 311 aa18.03■□□□□ 0.48
SMPD1-205ENST00000531303 MAT1AQ00266 395 aaKnown RBP18.03■□□□□ 0.48
SMPD1-205ENST00000531303 C2orf80Q0P641 193 aa18.03■□□□□ 0.48
SMPD1-205ENST00000531303 FAM53BQ14153 422 aa18.03■□□□□ 0.48
SMPD1-205ENST00000531303 AGKQ53H12 422 aa18.03■□□□□ 0.48
SMPD1-205ENST00000531303 BPHLQ86WA6 291 aaPredicted RBP18.03■□□□□ 0.48
SMPD1-205ENST00000531303 TMPRSS12Q86WS5 348 aa18.03■□□□□ 0.48
SMPD1-205ENST00000531303 PARP9Q8IXQ6 854 aa18.03■□□□□ 0.48
SMPD1-205ENST00000531303 ZCCHC7Q8N3Z6 543 aaKnown RBP18.03■□□□□ 0.48
SMPD1-205ENST00000531303 OR9I1Q8NGQ6 314 aa18.03■□□□□ 0.48
SMPD1-205ENST00000531303 TM4SF18Q96CE8 201 aa18.03■□□□□ 0.48
SMPD1-205ENST00000531303 ERP27Q96DN0 273 aa18.03■□□□□ 0.48
SMPD1-205ENST00000531303 TEX37Q96LM6 180 aa18.03■□□□□ 0.48
SMPD1-205ENST00000531303 MAPKAP1Q9BPZ7 522 aa18.03■□□□□ 0.48
SMPD1-205ENST00000531303 DPY30Q9C005 99 aa18.03■□□□□ 0.48
SMPD1-205ENST00000531303 BRINP2Q9C0B6 783 aa18.03■□□□□ 0.48
SMPD1-205ENST00000531303 MYLK2Q9H1R3 596 aa18.03■□□□□ 0.48
SMPD1-205ENST00000531303 SATB2Q9UPW6 733 aa18.03■□□□□ 0.48
SMPD1-205ENST00000531303 FER1L5A0AVI2 2057 aa18.03■□□□□ 0.48
SMPD1-205ENST00000531303 DSCR3O14972 297 aa18.02■□□□□ 0.48
SMPD1-205ENST00000531303 PRKRAO75569 313 aaKnown RBP18.02■□□□□ 0.48
SMPD1-205ENST00000531303 SCELO95171 688 aa18.02■□□□□ 0.48
SMPD1-205ENST00000531303 NSA2O95478 260 aaKnown RBP18.02■□□□□ 0.48
SMPD1-205ENST00000531303 ACPPP15309 386 aa18.02■□□□□ 0.48
SMPD1-205ENST00000531303 GPX3P22352 226 aa18.02■□□□□ 0.48
SMPD1-205ENST00000531303 ALDH9A1P49189 494 aa18.02■□□□□ 0.48
SMPD1-205ENST00000531303 ATP4BP51164 291 aa18.02■□□□□ 0.48
SMPD1-205ENST00000531303 MC1RQ01726 317 aa18.02■□□□□ 0.48
SMPD1-205ENST00000531303 SYT16Q17RD7 645 aa18.02■□□□□ 0.48
SMPD1-205ENST00000531303 PDCD4Q53EL6 469 aaKnown RBP18.02■□□□□ 0.48
SMPD1-205ENST00000531303 DCAF12Q5T6F0 453 aa18.02■□□□□ 0.48
SMPD1-205ENST00000531303 GPR180Q86V85 440 aa18.02■□□□□ 0.48
SMPD1-205ENST00000531303 TMEM132CQ8N3T6 1108 aa18.02■□□□□ 0.48
SMPD1-205ENST00000531303 CPSF7Q8N684 471 aaKnown RBP18.02■□□□□ 0.48
SMPD1-205ENST00000531303 FITM2Q8N6M3 262 aa18.02■□□□□ 0.48
SMPD1-205ENST00000531303 SLC38A9Q8NBW4 561 aa18.02■□□□□ 0.48
SMPD1-205ENST00000531303 WDR36Q8NI36 951 aaKnown RBP18.02■□□□□ 0.48
SMPD1-205ENST00000531303 ADAMTS14Q8WXS8 1223 aa18.02■□□□□ 0.48
SMPD1-205ENST00000531303 UCN3Q969E3 161 aa18.02■□□□□ 0.48
SMPD1-205ENST00000531303 COL26A1Q96A83 441 aa18.02■□□□□ 0.48
SMPD1-205ENST00000531303 ACTL8Q9H568 366 aa18.02■□□□□ 0.48
SMPD1-205ENST00000531303 SDR39U1Q9NRG7 319 aaPredicted RBP18.02■□□□□ 0.48
SMPD1-205ENST00000531303 ENAMQ9NRM1 1142 aa18.02■□□□□ 0.48
SMPD1-205ENST00000531303 TEX10Q9NXF1 929 aaPredicted RBP18.02■□□□□ 0.48
SMPD1-205ENST00000531303 SRPK3Q9UPE1 567 aa18.02■□□□□ 0.48
SMPD1-205ENST00000531303 ATG4BQ9Y4P1 393 aa18.02■□□□□ 0.48
SMPD1-205ENST00000531303 TMEM184BQ9Y519 407 aaPredicted RBP18.02■□□□□ 0.48
SMPD1-205ENST00000531303 ASB4Q9Y574 426 aa18.02■□□□□ 0.48
SMPD1-205ENST00000531303 B3GALT1Q9Y5Z6 326 aa18.02■□□□□ 0.48
SMPD1-205ENST00000531303 A0A1B0GX78 115 aa18.01■□□□□ 0.47
SMPD1-205ENST00000531303 CHST10O43529 356 aa18.01■□□□□ 0.47
SMPD1-205ENST00000531303 SLC22A3O75751 556 aa18.01■□□□□ 0.47
SMPD1-205ENST00000531303 KIAA0754O94854 1291 aa18.01■□□□□ 0.47
SMPD1-205ENST00000531303 ZNF28P17035 718 aa18.01■□□□□ 0.47
SMPD1-205ENST00000531303 SDHBP21912 280 aa18.01■□□□□ 0.47
SMPD1-205ENST00000531303 ASMTP46597 345 aa18.01■□□□□ 0.47
SMPD1-205ENST00000531303 GCGRP47871 477 aa18.01■□□□□ 0.47
SMPD1-205ENST00000531303 LIM2P55344 173 aa18.01■□□□□ 0.47
SMPD1-205ENST00000531303 CLDN8P56748 225 aa18.01■□□□□ 0.47
SMPD1-205ENST00000531303 SKP1P63208 163 aa18.01■□□□□ 0.47
SMPD1-205ENST00000531303 KLF10Q13118 480 aa18.01■□□□□ 0.47
SMPD1-205ENST00000531303 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms