RNA–Protein interactions for RNA: ENST00000530005.5

SLC43A3-217, Transcript of solute carrier family 43 member 3, humanhuman

TSL 1 (best)

Gene SLC43A3, Length 1,434 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC43A3-217ENST00000530005 DEPDC1Q5TB30 811 aa18.16■□□□□ 0.5
SLC43A3-217ENST00000530005 H3F3CQ6NXT2 135 aa18.16■□□□□ 0.5
SLC43A3-217ENST00000530005 LINC00696Q6ZRV3 163 aa18.16■□□□□ 0.5
SLC43A3-217ENST00000530005 TMEM52Q8NDY8 209 aa18.16■□□□□ 0.5
SLC43A3-217ENST00000530005 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.16■□□□□ 0.5
SLC43A3-217ENST00000530005 PTCHD1Q96NR3 888 aa18.16■□□□□ 0.5
SLC43A3-217ENST00000530005 NSUN5Q96P11 429 aaKnown RBP18.16■□□□□ 0.5
SLC43A3-217ENST00000530005 KCNC2Q96PR1 638 aa18.16■□□□□ 0.5
SLC43A3-217ENST00000530005 CLMPQ9H6B4 373 aa18.16■□□□□ 0.5
SLC43A3-217ENST00000530005 ACTR8Q9H981 624 aa18.16■□□□□ 0.5
SLC43A3-217ENST00000530005 SLAMF7Q9NQ25 335 aa18.16■□□□□ 0.5
SLC43A3-217ENST00000530005 KCMF1Q9P0J7 381 aa18.16■□□□□ 0.5
SLC43A3-217ENST00000530005 TMEM216Q9P0N5 145 aa18.16■□□□□ 0.5
SLC43A3-217ENST00000530005 DAPP1Q9UN19 280 aa18.16■□□□□ 0.5
SLC43A3-217ENST00000530005 MMACHCQ9Y4U1 282 aa18.16■□□□□ 0.5
SLC43A3-217ENST00000530005 PCDHGA10Q9Y5H3 936 aa18.16■□□□□ 0.5
SLC43A3-217ENST00000530005 FLNCQ14315 2725 aa18.16■□□□□ 0.5
SLC43A3-217ENST00000530005 RP1L1Q8IWN7 2480 aaPredicted RBP18.16■□□□□ 0.5
SLC43A3-217ENST00000530005 A0A088AWK7 358 aa18.15■□□□□ 0.5
SLC43A3-217ENST00000530005 TGFBR3LH3BV60 316 aa18.15■□□□□ 0.5
SLC43A3-217ENST00000530005 PSMD12O00232 456 aaPredicted RBP18.15■□□□□ 0.5
SLC43A3-217ENST00000530005 RPS17P08708 135 aaKnown RBP18.15■□□□□ 0.5
SLC43A3-217ENST00000530005 ZNF10P21506 573 aaPredicted RBP18.15■□□□□ 0.5
SLC43A3-217ENST00000530005 LIM2P55344 173 aa18.15■□□□□ 0.5
SLC43A3-217ENST00000530005 OR4D2P58180 307 aa18.15■□□□□ 0.5
SLC43A3-217ENST00000530005 SLC26A5P58743 744 aa18.15■□□□□ 0.5
SLC43A3-217ENST00000530005 AP2B1P63010 937 aa18.15■□□□□ 0.5
SLC43A3-217ENST00000530005 EXT1Q16394 746 aa18.15■□□□□ 0.5
SLC43A3-217ENST00000530005 BTBD16Q32M84 506 aa18.15■□□□□ 0.5
SLC43A3-217ENST00000530005 KHDRBS2Q5VWX1 349 aaKnown RBP18.15■□□□□ 0.5
SLC43A3-217ENST00000530005 LCA5Q86VQ0 697 aa18.15■□□□□ 0.5
SLC43A3-217ENST00000530005 OR52B6Q8NGF0 335 aa18.15■□□□□ 0.5
SLC43A3-217ENST00000530005 WDR20Q8TBZ3 569 aa18.15■□□□□ 0.5
SLC43A3-217ENST00000530005 M1APQ8TC57 530 aa18.15■□□□□ 0.5
SLC43A3-217ENST00000530005 ACMSDQ8TDX5 336 aa18.15■□□□□ 0.5
SLC43A3-217ENST00000530005 CMTM7Q96FZ5 175 aa18.15■□□□□ 0.5
SLC43A3-217ENST00000530005 LPAR4Q99677 370 aa18.15■□□□□ 0.5
SLC43A3-217ENST00000530005 TBCDQ9BTW9 1192 aa18.15■□□□□ 0.5
SLC43A3-217ENST00000530005 C1QTNF3Q9BXJ4 246 aa18.15■□□□□ 0.5
SLC43A3-217ENST00000530005 NOL11Q9H8H0 719 aaKnown RBP18.15■□□□□ 0.5
SLC43A3-217ENST00000530005 MMP25Q9NPA2 562 aa18.15■□□□□ 0.5
SLC43A3-217ENST00000530005 DMRT3Q9NQL9 472 aa18.15■□□□□ 0.5
SLC43A3-217ENST00000530005 ADGRE2Q9UHX3 823 aa18.15■□□□□ 0.5
SLC43A3-217ENST00000530005 RNF11Q9Y3C5 154 aa18.15■□□□□ 0.5
SLC43A3-217ENST00000530005 PCDHGA11Q9Y5H2 935 aa18.15■□□□□ 0.5
SLC43A3-217ENST00000530005 IQANK1A0A1B0GTG1 560 aa18.15■□□□□ 0.5
SLC43A3-217ENST00000530005 A8MT66 165 aa18.15■□□□□ 0.5
SLC43A3-217ENST00000530005 RTCAO00442 366 aaKnown RBP18.15■□□□□ 0.5
SLC43A3-217ENST00000530005 SMIM24O75264 130 aa18.15■□□□□ 0.5
SLC43A3-217ENST00000530005 ATP5A1P25705 553 aaKnown RBP18.15■□□□□ 0.5
SLC43A3-217ENST00000530005 TGM3Q08188 693 aa18.15■□□□□ 0.5
SLC43A3-217ENST00000530005 TRAF3Q13114 568 aa18.15■□□□□ 0.5
SLC43A3-217ENST00000530005 SH2D5Q6ZV89 423 aa18.15■□□□□ 0.5
SLC43A3-217ENST00000530005 SRFBP1Q8NEF9 429 aaKnown RBP18.15■□□□□ 0.5
SLC43A3-217ENST00000530005 ADAMTS18Q8TE60 1221 aa18.15■□□□□ 0.5
SLC43A3-217ENST00000530005 HAS2Q92819 552 aa18.15■□□□□ 0.5
SLC43A3-217ENST00000530005 SNRNP40Q96DI7 357 aaKnown RBP18.15■□□□□ 0.5
SLC43A3-217ENST00000530005 CDK15Q96Q40 435 aa18.15■□□□□ 0.5
SLC43A3-217ENST00000530005 CSF3RQ99062 836 aa18.15■□□□□ 0.5
SLC43A3-217ENST00000530005 MTERF1Q99551 399 aaKnown RBP18.15■□□□□ 0.5
SLC43A3-217ENST00000530005 BARD1Q99728 777 aaKnown RBP18.15■□□□□ 0.5
SLC43A3-217ENST00000530005 NPAS2Q99743 824 aa18.15■□□□□ 0.5
SLC43A3-217ENST00000530005 NTMT1Q9BV86 223 aa18.15■□□□□ 0.5
SLC43A3-217ENST00000530005 ILKAPQ9H0C8 392 aaPredicted RBP18.15■□□□□ 0.5
SLC43A3-217ENST00000530005 OR51B5Q9H339 312 aa18.15■□□□□ 0.5
SLC43A3-217ENST00000530005 COL12A1Q99715 3063 aa18.15■□□□□ 0.5
SLC43A3-217ENST00000530005 SH3BGRLO75368 114 aa18.14■□□□□ 0.49
SLC43A3-217ENST00000530005 HIST1H1TP22492 207 aaPredicted RBP18.14■□□□□ 0.49
SLC43A3-217ENST00000530005 HSD17B7P56937 341 aa18.14■□□□□ 0.49
SLC43A3-217ENST00000530005 ACTN3Q08043 901 aaPredicted RBP18.14■□□□□ 0.49
SLC43A3-217ENST00000530005 CPSF6Q16630 551 aaKnown RBP eCLIP18.14■□□□□ 0.49
SLC43A3-217ENST00000530005 CHSY3Q70JA7 882 aa18.14■□□□□ 0.49
SLC43A3-217ENST00000530005 RPS27LQ71UM5 84 aaKnown RBP18.14■□□□□ 0.49
SLC43A3-217ENST00000530005 TDRPQ86YL5 185 aa18.14■□□□□ 0.49
SLC43A3-217ENST00000530005 MYLK4Q86YV6 388 aaPredicted RBP18.14■□□□□ 0.49
SLC43A3-217ENST00000530005 IQCKQ8N0W5 287 aa18.14■□□□□ 0.49
SLC43A3-217ENST00000530005 CNPY4Q8N129 248 aa18.14■□□□□ 0.49
SLC43A3-217ENST00000530005 ACOT4Q8N9L9 421 aa18.14■□□□□ 0.49
SLC43A3-217ENST00000530005 FAM47BQ8NA70 645 aa18.14■□□□□ 0.49
SLC43A3-217ENST00000530005 CATSPER1Q8NEC5 780 aa18.14■□□□□ 0.49
SLC43A3-217ENST00000530005 NFAM1Q8NET5 270 aaPredicted RBP18.14■□□□□ 0.49
SLC43A3-217ENST00000530005 DNAJB14Q8TBM8 379 aa18.14■□□□□ 0.49
SLC43A3-217ENST00000530005 ZNF483Q8TF39 744 aaPredicted RBP18.14■□□□□ 0.49
SLC43A3-217ENST00000530005 C19orf60Q96EN9 201 aa18.14■□□□□ 0.49
SLC43A3-217ENST00000530005 ZNF717Q9BY31 904 aaPredicted RBP18.14■□□□□ 0.49
SLC43A3-217ENST00000530005 ROGDIQ9GZN7 287 aa18.14■□□□□ 0.49
SLC43A3-217ENST00000530005 RNF32Q9H0A6 362 aa18.14■□□□□ 0.49
SLC43A3-217ENST00000530005 LYRM4Q9HD34 91 aa18.14■□□□□ 0.49
SLC43A3-217ENST00000530005 TBK1Q9UHD2 729 aa18.14■□□□□ 0.49
SLC43A3-217ENST00000530005 A0A1B0GTL3 188 aa18.13■□□□□ 0.49
SLC43A3-217ENST00000530005 GOLGA8RI6L899 631 aa18.13■□□□□ 0.49
SLC43A3-217ENST00000530005 SAP18O00422 153 aaKnown RBP18.13■□□□□ 0.49
SLC43A3-217ENST00000530005 ZIC2O95409 532 aaPredicted RBP18.13■□□□□ 0.49
SLC43A3-217ENST00000530005 CLDN9O95484 217 aa18.13■□□□□ 0.49
SLC43A3-217ENST00000530005 VSNL1P62760 191 aa18.13■□□□□ 0.49
SLC43A3-217ENST00000530005 DDX39BQ13838 428 aaKnown RBP18.13■□□□□ 0.49
SLC43A3-217ENST00000530005 ZNF169Q14929 603 aaPredicted RBP18.13■□□□□ 0.49
SLC43A3-217ENST00000530005 RASA2Q15283 850 aa18.13■□□□□ 0.49
SLC43A3-217ENST00000530005 ZRSR2Q15696 482 aaKnown RBP18.13■□□□□ 0.49
SLC43A3-217ENST00000530005 ELP5Q8TE02 316 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms