RNA–Protein interactions for RNA: ENST00000529986.5

CTNND1-223, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-223ENST00000529986 OR5T1Q8NG75 326 aa7.37□□□□□ -1.23
CTNND1-223ENST00000529986 OR14C36Q8NHC7 312 aa7.37□□□□□ -1.23
CTNND1-223ENST00000529986 ZFP90Q8TF47 636 aa7.37□□□□□ -1.23
CTNND1-223ENST00000529986 SGCDQ92629 289 aa7.37□□□□□ -1.23
CTNND1-223ENST00000529986 CD180Q99467 661 aa7.37□□□□□ -1.23
CTNND1-223ENST00000529986 SEZ6LQ9BYH1 1024 aa7.37□□□□□ -1.23
CTNND1-223ENST00000529986 ZBTB20Q9HC78 741 aaPredicted RBP7.37□□□□□ -1.23
CTNND1-223ENST00000529986 MRPS30Q9NP92 439 aaKnown RBP7.37□□□□□ -1.23
CTNND1-223ENST00000529986 UTS2RQ9UKP6 389 aa7.37□□□□□ -1.23
CTNND1-223ENST00000529986 EXOSC1Q9Y3B2 195 aaKnown RBP7.37□□□□□ -1.23
CTNND1-223ENST00000529986 NRP1O14786 923 aa7.36□□□□□ -1.23
CTNND1-223ENST00000529986 PI15O43692 258 aa7.36□□□□□ -1.23
CTNND1-223ENST00000529986 LCKP06239 509 aa7.36□□□□□ -1.23
CTNND1-223ENST00000529986 HCKP08631 526 aa7.36□□□□□ -1.23
CTNND1-223ENST00000529986 RAB3BP20337 219 aa7.36□□□□□ -1.23
CTNND1-223ENST00000529986 CXCR1P25024 350 aa7.36□□□□□ -1.23
CTNND1-223ENST00000529986 HSD11B1P28845 292 aa7.36□□□□□ -1.23
CTNND1-223ENST00000529986 HTR7P34969 479 aa7.36□□□□□ -1.23
CTNND1-223ENST00000529986 AP1S1P61966 158 aa7.36□□□□□ -1.23
CTNND1-223ENST00000529986 PTCHD3Q3KNS1 767 aa7.36□□□□□ -1.23
CTNND1-223ENST00000529986 TMEM69Q5SWH9 247 aa7.36□□□□□ -1.23
CTNND1-223ENST00000529986 THOC6Q86W42 341 aaKnown RBP7.36□□□□□ -1.23
CTNND1-223ENST00000529986 NUDT13Q86X67 352 aa7.36□□□□□ -1.23
CTNND1-223ENST00000529986 TICAM1Q8IUC6 712 aa7.36□□□□□ -1.23
CTNND1-223ENST00000529986 OR52E4Q8NGH9 312 aa7.36□□□□□ -1.23
CTNND1-223ENST00000529986 FRS2Q8WU20 508 aa7.36□□□□□ -1.23
CTNND1-223ENST00000529986 SNX27Q96L92 541 aa7.36□□□□□ -1.23
CTNND1-223ENST00000529986 HYLS1Q96M11 299 aa7.36□□□□□ -1.23
CTNND1-223ENST00000529986 SCGB3A2Q96PL1 93 aa7.36□□□□□ -1.23
CTNND1-223ENST00000529986 NELL2Q99435 816 aa7.36□□□□□ -1.23
CTNND1-223ENST00000529986 P2RY13Q9BPV8 354 aa7.36□□□□□ -1.23
CTNND1-223ENST00000529986 PRDM9Q9NQV7 894 aa7.36□□□□□ -1.23
CTNND1-223ENST00000529986 ZNF541Q9H0D2 1346 aa7.36□□□□□ -1.23
CTNND1-223ENST00000529986 IGKV6D-41A0A0C4DH26 115 aa7.36□□□□□ -1.23
CTNND1-223ENST00000529986 HMX3A6NHT5 357 aa7.36□□□□□ -1.23
CTNND1-223ENST00000529986 GLOD5A6NK44 160 aa7.36□□□□□ -1.23
CTNND1-223ENST00000529986 GRXCR1A8MXD5 290 aa7.36□□□□□ -1.23
CTNND1-223ENST00000529986 KHNYNO15037 678 aaKnown RBP7.36□□□□□ -1.23
CTNND1-223ENST00000529986 ERI3O43414 337 aaKnown RBP7.36□□□□□ -1.23
CTNND1-223ENST00000529986 BCAS1O75363 584 aaPredicted RBP7.36□□□□□ -1.23
CTNND1-223ENST00000529986 BPNT1O95861 308 aa7.36□□□□□ -1.23
CTNND1-223ENST00000529986 ALPPL2P10696 532 aa7.36□□□□□ -1.23
CTNND1-223ENST00000529986 RPL17P18621 184 aaKnown RBP7.36□□□□□ -1.23
CTNND1-223ENST00000529986 CSNK2A2P19784 350 aaPredicted RBP7.36□□□□□ -1.23
CTNND1-223ENST00000529986 GSTM2P28161 218 aa7.36□□□□□ -1.23
CTNND1-223ENST00000529986 BMP8BP34820 402 aa7.36□□□□□ -1.23
CTNND1-223ENST00000529986 RFC2P35250 354 aa7.36□□□□□ -1.23
CTNND1-223ENST00000529986 ARL3P36405 182 aa7.36□□□□□ -1.23
CTNND1-223ENST00000529986 RAB8AP61006 207 aa7.36□□□□□ -1.23
CTNND1-223ENST00000529986 MS4A2Q01362 244 aa7.36□□□□□ -1.23
CTNND1-223ENST00000529986 ST3GAL3Q11203 375 aa7.36□□□□□ -1.23
CTNND1-223ENST00000529986 GK3PQ14409 553 aa7.36□□□□□ -1.23
CTNND1-223ENST00000529986 PNCKQ6P2M8 343 aa7.36□□□□□ -1.23
CTNND1-223ENST00000529986 BEND4Q6ZU67 534 aa7.36□□□□□ -1.23
CTNND1-223ENST00000529986 SHFQ7M4L6 423 aa7.36□□□□□ -1.23
CTNND1-223ENST00000529986 BMP8AQ7Z5Y6 402 aa7.36□□□□□ -1.23
CTNND1-223ENST00000529986 KLBQ86Z14 1044 aa7.36□□□□□ -1.23
CTNND1-223ENST00000529986 BEST3Q8N1M1 668 aa7.36□□□□□ -1.23
CTNND1-223ENST00000529986 PQLC3Q8N755 202 aa7.36□□□□□ -1.23
CTNND1-223ENST00000529986 PNLDC1Q8NA58 520 aaKnown RBP7.36□□□□□ -1.23
CTNND1-223ENST00000529986 TBC1D15Q8TC07 691 aa7.36□□□□□ -1.23
CTNND1-223ENST00000529986 C15orf40Q8WUR7 153 aa7.36□□□□□ -1.23
CTNND1-223ENST00000529986 AUTS2Q8WXX7 1259 aa7.36□□□□□ -1.23
CTNND1-223ENST00000529986 SNAPC3Q92966 411 aa7.36□□□□□ -1.23
CTNND1-223ENST00000529986 SECISBP2Q96T21 854 aaKnown RBP7.36□□□□□ -1.23
CTNND1-223ENST00000529986 CACNG6Q9BXT2 260 aa7.36□□□□□ -1.23
CTNND1-223ENST00000529986 SYT4Q9H2B2 425 aa7.36□□□□□ -1.23
CTNND1-223ENST00000529986 TMEM184CQ9NVA4 438 aa7.36□□□□□ -1.23
CTNND1-223ENST00000529986 COLEC10Q9Y6Z7 277 aa7.36□□□□□ -1.23
CTNND1-223ENST00000529986 F8W036 122 aa7.36□□□□□ -1.23
CTNND1-223ENST00000529986 NUAK1O60285 661 aa7.36□□□□□ -1.23
CTNND1-223ENST00000529986 RBBP9O75884 186 aa7.36□□□□□ -1.23
CTNND1-223ENST00000529986 UBXN7O94888 489 aa7.36□□□□□ -1.23
CTNND1-223ENST00000529986 POP4O95707 220 aaKnown RBP7.36□□□□□ -1.23
CTNND1-223ENST00000529986 ZNF8P17098 575 aaPredicted RBP7.36□□□□□ -1.23
CTNND1-223ENST00000529986 MYF6P23409 242 aa7.36□□□□□ -1.23
CTNND1-223ENST00000529986 LUMP51884 338 aaPredicted RBP7.36□□□□□ -1.23
CTNND1-223ENST00000529986 BLOC1S1P78537 153 aa7.36□□□□□ -1.23
CTNND1-223ENST00000529986 MEF2AQ02078 507 aaPredicted RBP7.36□□□□□ -1.23
CTNND1-223ENST00000529986 SPHARQ15513 63 aa7.36□□□□□ -1.23
CTNND1-223ENST00000529986 CLEC20AQ6ZU45 233 aa7.36□□□□□ -1.23
CTNND1-223ENST00000529986 OR10T2Q8NGX3 314 aa7.36□□□□□ -1.23
CTNND1-223ENST00000529986 UPF1Q92900 1129 aaKnown RBP eCLIP7.36□□□□□ -1.236e-7■■□□□ 14.4
CTNND1-223ENST00000529986 RIT1Q92963 219 aa7.36□□□□□ -1.23
CTNND1-223ENST00000529986 ITPKCQ96DU7 683 aa7.36□□□□□ -1.23
CTNND1-223ENST00000529986 COQ10AQ96MF6 247 aa7.36□□□□□ -1.23
CTNND1-223ENST00000529986 SLC29A1Q99808 456 aa7.36□□□□□ -1.23
CTNND1-223ENST00000529986 NPLQ9BXD5 320 aaPredicted RBP7.36□□□□□ -1.23
CTNND1-223ENST00000529986 NIFKQ9BYG3 293 aaKnown RBP7.36□□□□□ -1.23
CTNND1-223ENST00000529986 ADAM7Q9H2U9 754 aa7.36□□□□□ -1.23
CTNND1-223ENST00000529986 ASF1BQ9NVP2 202 aa7.36□□□□□ -1.23
CTNND1-223ENST00000529986 IFT52Q9Y366 437 aa7.36□□□□□ -1.23
CTNND1-223ENST00000529986 SCN11AQ9UI33 1791 aa7.36□□□□□ -1.23
CTNND1-223ENST00000529986 ZNF254O75437 659 aa7.36□□□□□ -1.23
CTNND1-223ENST00000529986 HOXC8P31273 242 aa7.36□□□□□ -1.23
CTNND1-223ENST00000529986 NAA10P41227 235 aaPredicted RBP7.36□□□□□ -1.23
CTNND1-223ENST00000529986 CSKP41240 450 aa7.36□□□□□ -1.23
CTNND1-223ENST00000529986 NPRL3Q12980 569 aa7.36□□□□□ -1.23
CTNND1-223ENST00000529986 FADDQ13158 208 aa7.36□□□□□ -1.23
CTNND1-223ENST00000529986 LASP1Q14847 261 aaKnown RBP7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms