RNA–Protein interactions for RNA: ENST00000529963.1

AMBRA1-209, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best)

Gene AMBRA1, Length 1,529 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-209ENST00000529963 RDH14Q9HBH5 336 aa4.95□□□□□ -1.62
AMBRA1-209ENST00000529963 Q9N2J8 555 aa4.95□□□□□ -1.62
AMBRA1-209ENST00000529963 TAAR2Q9P1P5 351 aa4.95□□□□□ -1.62
AMBRA1-209ENST00000529963 NAV3Q8IVL0 2385 aa4.95□□□□□ -1.62
AMBRA1-209ENST00000529963 ITPR2Q14571 2701 aa4.94□□□□□ -1.62
AMBRA1-209ENST00000529963 IGHV5-10-1A0A0J9YXX1 117 aa4.94□□□□□ -1.62
AMBRA1-209ENST00000529963 C17orf100A8MU93 164 aa4.94□□□□□ -1.62
AMBRA1-209ENST00000529963 TRAFD1O14545 582 aaPredicted RBP4.94□□□□□ -1.62
AMBRA1-209ENST00000529963 EPHB6O15197 1021 aa4.94□□□□□ -1.62
AMBRA1-209ENST00000529963 SOCS5O75159 536 aa4.94□□□□□ -1.62
AMBRA1-209ENST00000529963 GUCY1B2O75343 617 aa4.94□□□□□ -1.62
AMBRA1-209ENST00000529963 FGF1P05230 155 aa4.94□□□□□ -1.62
AMBRA1-209ENST00000529963 FCGR2AP12318 317 aa4.94□□□□□ -1.62
AMBRA1-209ENST00000529963 CCL4P13236 92 aa4.94□□□□□ -1.62
AMBRA1-209ENST00000529963 ERCC2P18074 760 aa4.94□□□□□ -1.62
AMBRA1-209ENST00000529963 TEAD1P28347 426 aa4.94□□□□□ -1.62
AMBRA1-209ENST00000529963 CSTF2P33240 577 aaKnown RBP eCLIP4.94□□□□□ -1.62
AMBRA1-209ENST00000529963 HSPA9P38646 679 aaKnown RBP4.94□□□□□ -1.62
AMBRA1-209ENST00000529963 MMP13P45452 471 aa4.94□□□□□ -1.62
AMBRA1-209ENST00000529963 GNPDA1P46926 289 aa4.94□□□□□ -1.62
AMBRA1-209ENST00000529963 RGRP47804 291 aa4.94□□□□□ -1.62
AMBRA1-209ENST00000529963 RPS6KA3P51812 740 aa4.94□□□□□ -1.62
AMBRA1-209ENST00000529963 OR1D5P58170 312 aa4.94□□□□□ -1.62
AMBRA1-209ENST00000529963 IL10RBQ08334 325 aa4.94□□□□□ -1.62
AMBRA1-209ENST00000529963 ZNF235Q14590 738 aa4.94□□□□□ -1.62
AMBRA1-209ENST00000529963 NR1D2Q14995 579 aa4.94□□□□□ -1.62
AMBRA1-209ENST00000529963 C16orf72Q14CZ0 275 aa4.94□□□□□ -1.62
AMBRA1-209ENST00000529963 UBAP2Q5T6F2 1119 aaKnown RBP4.94□□□□□ -1.62
AMBRA1-209ENST00000529963 ERMARDQ5T6L9 678 aa4.94□□□□□ -1.62
AMBRA1-209ENST00000529963 RAET1GQ6H3X3 334 aa4.94□□□□□ -1.62
AMBRA1-209ENST00000529963 HMBOX1Q6NT76 420 aa4.94□□□□□ -1.62
AMBRA1-209ENST00000529963 KRT77Q7Z794 578 aa4.94□□□□□ -1.62
AMBRA1-209ENST00000529963 GALNT5Q7Z7M9 940 aa4.94□□□□□ -1.62
AMBRA1-209ENST00000529963 C17orf82Q86X59 251 aaPredicted RBP4.94□□□□□ -1.62
AMBRA1-209ENST00000529963 PSTKQ8IV42 348 aaKnown RBP4.94□□□□□ -1.62
AMBRA1-209ENST00000529963 SFTPA2Q8IWL1 248 aa4.94□□□□□ -1.62
AMBRA1-209ENST00000529963 DDIASQ8IXT1 998 aa4.94□□□□□ -1.62
AMBRA1-209ENST00000529963 MCOLN2Q8IZK6 566 aa4.94□□□□□ -1.62
AMBRA1-209ENST00000529963 BBS5Q8N3I7 341 aa4.94□□□□□ -1.62
AMBRA1-209ENST00000529963 NANOGP1Q8N7R0 232 aa4.94□□□□□ -1.62
AMBRA1-209ENST00000529963 OR4D9Q8NGE8 314 aa4.94□□□□□ -1.62
AMBRA1-209ENST00000529963 PDCD6IPQ8WUM4 868 aaKnown RBP4.94□□□□□ -1.62
AMBRA1-209ENST00000529963 HTR3CQ8WXA8 447 aa4.94□□□□□ -1.62
AMBRA1-209ENST00000529963 ZNF599Q96NL3 588 aa4.94□□□□□ -1.62
AMBRA1-209ENST00000529963 CATSPER2Q96P56 530 aa4.94□□□□□ -1.62
AMBRA1-209ENST00000529963 PSKH2Q96QS6 385 aa4.94□□□□□ -1.62
AMBRA1-209ENST00000529963 FUCA2Q9BTY2 467 aa4.94□□□□□ -1.62
AMBRA1-209ENST00000529963 DDA1Q9BW61 102 aa4.94□□□□□ -1.62
AMBRA1-209ENST00000529963 SLC29A3Q9BZD2 475 aa4.94□□□□□ -1.62
AMBRA1-209ENST00000529963 SLC39A8Q9C0K1 460 aa4.94□□□□□ -1.62
AMBRA1-209ENST00000529963 PAPOLBQ9NRJ5 636 aaKnown RBP4.94□□□□□ -1.62
AMBRA1-209ENST00000529963 SPATS2LQ9NUQ6 558 aaKnown RBP4.94□□□□□ -1.62
AMBRA1-209ENST00000529963 PARVAQ9NVD7 372 aa4.94□□□□□ -1.62
AMBRA1-209ENST00000529963 GPATCH2LQ9NWQ4 482 aa4.94□□□□□ -1.62
AMBRA1-209ENST00000529963 NKIRAS2Q9NYR9 191 aa4.94□□□□□ -1.62
AMBRA1-209ENST00000529963 UPB1Q9UBR1 384 aa4.94□□□□□ -1.62
AMBRA1-209ENST00000529963 HSF4Q9ULV5 492 aa4.94□□□□□ -1.62
AMBRA1-209ENST00000529963 SUFUQ9UMX1 484 aa4.94□□□□□ -1.62
AMBRA1-209ENST00000529963 LRP4O75096 1905 aa4.94□□□□□ -1.62
AMBRA1-209ENST00000529963 SETD2Q9BYW2 2564 aaPredicted RBP4.94□□□□□ -1.62
AMBRA1-209ENST00000529963 SCN8AQ9UQD0 1980 aa4.93□□□□□ -1.62
AMBRA1-209ENST00000529963 TRBV5-3A0A0A0MS03 114 aa4.93□□□□□ -1.62
AMBRA1-209ENST00000529963 A8MX80 341 aa4.93□□□□□ -1.62
AMBRA1-209ENST00000529963 PSMD11O00231 422 aa4.93□□□□□ -1.62
AMBRA1-209ENST00000529963 B4GAT1O43505 415 aa4.93□□□□□ -1.62
AMBRA1-209ENST00000529963 PRPSAP2O60256 369 aa4.93□□□□□ -1.62
AMBRA1-209ENST00000529963 NEURL1O76050 574 aa4.93□□□□□ -1.62
AMBRA1-209ENST00000529963 SCGB1D1O95968 90 aa4.93□□□□□ -1.62
AMBRA1-209ENST00000529963 IVLP07476 585 aa4.93□□□□□ -1.62
AMBRA1-209ENST00000529963 FGF3P11487 239 aaPredicted RBP4.93□□□□□ -1.62
AMBRA1-209ENST00000529963 FERP16591 822 aa4.93□□□□□ -1.62
AMBRA1-209ENST00000529963 GM2AP17900 193 aa4.93□□□□□ -1.62
AMBRA1-209ENST00000529963 ALOX12P18054 663 aa4.93□□□□□ -1.62
AMBRA1-209ENST00000529963 AK4P27144 223 aaPredicted RBP4.93□□□□□ -1.62
AMBRA1-209ENST00000529963 CD1CP29017 333 aa4.93□□□□□ -1.62
AMBRA1-209ENST00000529963 ACTR1BP42025 376 aa4.93□□□□□ -1.62
AMBRA1-209ENST00000529963 PAFAH1B1P43034 410 aa4.93□□□□□ -1.62
AMBRA1-209ENST00000529963 LIMK2P53671 638 aa4.93□□□□□ -1.62
AMBRA1-209ENST00000529963 ACTR1AP61163 376 aa4.93□□□□□ -1.62
AMBRA1-209ENST00000529963 RPP30P78346 268 aaKnown RBP4.93□□□□□ -1.62
AMBRA1-209ENST00000529963 CDK3Q00526 305 aa4.93□□□□□ -1.62
AMBRA1-209ENST00000529963 UBXN1Q04323 297 aa4.93□□□□□ -1.62
AMBRA1-209ENST00000529963 MAMLD1Q13495 774 aa4.93□□□□□ -1.62
AMBRA1-209ENST00000529963 SEMA3AQ14563 771 aa4.93□□□□□ -1.62
AMBRA1-209ENST00000529963 IL13RA2Q14627 380 aa4.93□□□□□ -1.62
AMBRA1-209ENST00000529963 SMTNL2Q2TAL5 461 aa4.93□□□□□ -1.62
AMBRA1-209ENST00000529963 PPP6R3Q5H9R7 873 aaPredicted RBP4.93□□□□□ -1.62
AMBRA1-209ENST00000529963 DCAF12Q5T6F0 453 aa4.93□□□□□ -1.62
AMBRA1-209ENST00000529963 GALNT7Q86SF2 657 aa4.93□□□□□ -1.62
AMBRA1-209ENST00000529963 NRROSQ86YC3 692 aa4.93□□□□□ -1.62
AMBRA1-209ENST00000529963 ARHGAP12Q8IWW6 846 aa4.93□□□□□ -1.62
AMBRA1-209ENST00000529963 PELI3Q8N2H9 469 aa4.93□□□□□ -1.62
AMBRA1-209ENST00000529963 NPWQ8N729 165 aa4.93□□□□□ -1.62
AMBRA1-209ENST00000529963 ZNF564Q8TBZ8 553 aaPredicted RBP4.93□□□□□ -1.62
AMBRA1-209ENST00000529963 BCAS4Q8TDM0 211 aa4.93□□□□□ -1.62
AMBRA1-209ENST00000529963 NSMCE1Q8WV22 266 aa4.93□□□□□ -1.62
AMBRA1-209ENST00000529963 ART4Q93070 314 aa4.93□□□□□ -1.62
AMBRA1-209ENST00000529963 KIAA1143Q96AT1 154 aaPredicted RBP4.93□□□□□ -1.62
AMBRA1-209ENST00000529963 MOCOSQ96EN8 888 aa4.93□□□□□ -1.62
AMBRA1-209ENST00000529963 DTD2Q96FN9 168 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms