RNA–Protein interactions for RNA: ENST00000529553.1

AMBRA1-207, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-207ENST00000529553 OPN5Q6U736 354 aa10.73□□□□□ -0.69
AMBRA1-207ENST00000529553 PPP1R21Q6ZMI0 780 aa10.73□□□□□ -0.69
AMBRA1-207ENST00000529553 C17orf64Q86WR6 236 aa10.73□□□□□ -0.69
AMBRA1-207ENST00000529553 HIPK1Q86Z02 1210 aa10.73□□□□□ -0.69
AMBRA1-207ENST00000529553 PM20D2Q8IYS1 436 aa10.73□□□□□ -0.69
AMBRA1-207ENST00000529553 GPATCH11Q8N954 259 aa10.73□□□□□ -0.69
AMBRA1-207ENST00000529553 OR8K3Q8NH51 312 aa10.73□□□□□ -0.69
AMBRA1-207ENST00000529553 NT5CQ8TCD5 201 aa10.73□□□□□ -0.69
AMBRA1-207ENST00000529553 LPGAT1Q92604 370 aa10.73□□□□□ -0.69
AMBRA1-207ENST00000529553 SCYL1Q96KG9 808 aa10.73□□□□□ -0.69
AMBRA1-207ENST00000529553 CAPZA3Q96KX2 299 aa10.73□□□□□ -0.69
AMBRA1-207ENST00000529553 NHEJ1Q9H9Q4 299 aaPredicted RBP10.73□□□□□ -0.69
AMBRA1-207ENST00000529553 CHRAC1Q9NRG0 131 aa10.73□□□□□ -0.69
AMBRA1-207ENST00000529553 SPTLC3Q9NUV7 552 aa10.73□□□□□ -0.69
AMBRA1-207ENST00000529553 TUBA8Q9NY65 449 aaPredicted RBP10.73□□□□□ -0.69
AMBRA1-207ENST00000529553 NDRG3Q9UGV2 375 aa10.73□□□□□ -0.69
AMBRA1-207ENST00000529553 TSR3Q9UJK0 312 aaKnown RBP10.73□□□□□ -0.69
AMBRA1-207ENST00000529553 ATG4BQ9Y4P1 393 aa10.73□□□□□ -0.69
AMBRA1-207ENST00000529553 NPFFR2Q9Y5X5 522 aa10.73□□□□□ -0.69
AMBRA1-207ENST00000529553 URADA6NGE7 173 aa10.72□□□□□ -0.69
AMBRA1-207ENST00000529553 CD8B2A6NJW9 211 aa10.72□□□□□ -0.69
AMBRA1-207ENST00000529553 G3V3Y1 287 aa10.72□□□□□ -0.69
AMBRA1-207ENST00000529553 NDUFS4O43181 175 aa10.72□□□□□ -0.69
AMBRA1-207ENST00000529553 PRKNO60260 465 aaPredicted RBP10.72□□□□□ -0.69
AMBRA1-207ENST00000529553 CEP104O60308 925 aa10.72□□□□□ -0.69
AMBRA1-207ENST00000529553 NIPSNAP2O75323 286 aa10.72□□□□□ -0.69
AMBRA1-207ENST00000529553 MPC1LP0DKB6 136 aa10.72□□□□□ -0.69
AMBRA1-207ENST00000529553 PAX1P15863 534 aa10.72□□□□□ -0.69
AMBRA1-207ENST00000529553 CCND1P24385 295 aa10.72□□□□□ -0.69
AMBRA1-207ENST00000529553 STIP1P31948 543 aaKnown RBP10.72□□□□□ -0.69
AMBRA1-207ENST00000529553 CTNNA1P35221 906 aaKnown RBP10.72□□□□□ -0.69
AMBRA1-207ENST00000529553 FDFT1P37268 417 aa10.72□□□□□ -0.69
AMBRA1-207ENST00000529553 DNASE1L1P49184 302 aa10.72□□□□□ -0.69
AMBRA1-207ENST00000529553 TPM4P67936 248 aa10.72□□□□□ -0.69
AMBRA1-207ENST00000529553 OLR1P78380 273 aa10.72□□□□□ -0.69
AMBRA1-207ENST00000529553 RGS1Q08116 209 aa10.72□□□□□ -0.69
AMBRA1-207ENST00000529553 HYAL2Q12891 473 aa10.72□□□□□ -0.69
AMBRA1-207ENST00000529553 PHKG1Q16816 387 aa10.72□□□□□ -0.69
AMBRA1-207ENST00000529553 HSDL2Q6YN16 418 aa10.72□□□□□ -0.69
AMBRA1-207ENST00000529553 C20orf204Q6ZNR8 217 aa10.72□□□□□ -0.69
AMBRA1-207ENST00000529553 SCUBE1Q8IWY4 988 aa10.72□□□□□ -0.69
AMBRA1-207ENST00000529553 LRRC25Q8N386 305 aaPredicted RBP10.72□□□□□ -0.69
AMBRA1-207ENST00000529553 TMEM132CQ8N3T6 1108 aa10.72□□□□□ -0.69
AMBRA1-207ENST00000529553 TBC1D19Q8N5T2 526 aa10.72□□□□□ -0.69
AMBRA1-207ENST00000529553 ABHD11Q8NFV4 315 aa10.72□□□□□ -0.69
AMBRA1-207ENST00000529553 OR4K1Q8NGD4 311 aa10.72□□□□□ -0.69
AMBRA1-207ENST00000529553 KIAA1191Q96A73 305 aa10.72□□□□□ -0.69
AMBRA1-207ENST00000529553 PERPQ96FX8 193 aa10.72□□□□□ -0.69
AMBRA1-207ENST00000529553 CCL19Q99731 98 aa10.72□□□□□ -0.69
AMBRA1-207ENST00000529553 GOLPH3Q9H4A6 298 aa10.72□□□□□ -0.69
AMBRA1-207ENST00000529553 CALHM2Q9HA72 323 aa10.72□□□□□ -0.69
AMBRA1-207ENST00000529553 ZFP64Q9NPA5 681 aa10.72□□□□□ -0.69
AMBRA1-207ENST00000529553 PNO1Q9NRX1 252 aaKnown RBP10.72□□□□□ -0.69
AMBRA1-207ENST00000529553 TREX1Q9NSU2 369 aa10.72□□□□□ -0.69
AMBRA1-207ENST00000529553 RYDENQ9NUL5 291 aaKnown RBP10.72□□□□□ -0.69
AMBRA1-207ENST00000529553 GALPQ9UBC7 116 aa10.72□□□□□ -0.69
AMBRA1-207ENST00000529553 MBD3L3A6NE82 208 aaPredicted RBP10.71□□□□□ -0.69
AMBRA1-207ENST00000529553 GOLGA6L9A6NEM1 432 aa10.71□□□□□ -0.69
AMBRA1-207ENST00000529553 WWP2O00308 870 aa10.71□□□□□ -0.69
AMBRA1-207ENST00000529553 ARID1AO14497 2285 aa10.71□□□□□ -0.69
AMBRA1-207ENST00000529553 TMCC2O75069 709 aa10.71□□□□□ -0.69
AMBRA1-207ENST00000529553 ZNF888P0CJ79 500 aaPredicted RBP10.71□□□□□ -0.69
AMBRA1-207ENST00000529553 SMIM10L1P0DMW3 83 aa10.71□□□□□ -0.69
AMBRA1-207ENST00000529553 ENO3P13929 434 aaPredicted RBP10.71□□□□□ -0.69
AMBRA1-207ENST00000529553 GRIA1P42261 906 aa10.71□□□□□ -0.69
AMBRA1-207ENST00000529553 CLCN7P51798 805 aa10.71□□□□□ -0.69
AMBRA1-207ENST00000529553 HK2P52789 917 aa10.71□□□□□ -0.69
AMBRA1-207ENST00000529553 HSD17B7P56937 341 aa10.71□□□□□ -0.69
AMBRA1-207ENST00000529553 KRTAP1-1Q07627 177 aa10.71□□□□□ -0.69
AMBRA1-207ENST00000529553 DMTNQ08495 405 aa10.71□□□□□ -0.69
AMBRA1-207ENST00000529553 CYHR1Q6ZMK1 362 aa10.71□□□□□ -0.69
AMBRA1-207ENST00000529553 RASGEF1CQ8N431 466 aa10.71□□□□□ -0.69
AMBRA1-207ENST00000529553 LIX1Q8N485 282 aa10.71□□□□□ -0.69
AMBRA1-207ENST00000529553 MORN4Q8NDC4 146 aa10.71□□□□□ -0.69
AMBRA1-207ENST00000529553 OR5L2Q8NGL0 311 aa10.71□□□□□ -0.69
AMBRA1-207ENST00000529553 MBD3L2Q8NHZ7 208 aaPredicted RBP10.71□□□□□ -0.69
AMBRA1-207ENST00000529553 PPP1R14CQ8TAE6 165 aa10.71□□□□□ -0.69
AMBRA1-207ENST00000529553 UTP15Q8TED0 518 aaKnown RBP10.71□□□□□ -0.69
AMBRA1-207ENST00000529553 SMIM10Q96HG1 83 aa10.71□□□□□ -0.69
AMBRA1-207ENST00000529553 PDLIM2Q96JY6 352 aa10.71□□□□□ -0.69
AMBRA1-207ENST00000529553 CHP1Q99653 195 aa10.71□□□□□ -0.69
AMBRA1-207ENST00000529553 TIMP4Q99727 224 aa10.71□□□□□ -0.69
AMBRA1-207ENST00000529553 RBM24Q9BX46 236 aaKnown RBP10.71□□□□□ -0.69
AMBRA1-207ENST00000529553 PRDM14Q9GZV8 571 aa10.71□□□□□ -0.69
AMBRA1-207ENST00000529553 ZNF703Q9H7S9 590 aaPredicted RBP10.71□□□□□ -0.69
AMBRA1-207ENST00000529553 LIN28AQ9H9Z2 209 aaKnown RBP10.71□□□□□ -0.69
AMBRA1-207ENST00000529553 ETNK1Q9HBU6 452 aa10.71□□□□□ -0.69
AMBRA1-207ENST00000529553 ADAP2Q9NPF8 381 aa10.71□□□□□ -0.69
AMBRA1-207ENST00000529553 SEMA4BQ9NPR2 832 aaPredicted RBP10.71□□□□□ -0.69
AMBRA1-207ENST00000529553 BOKQ9UMX3 212 aaPredicted RBP10.71□□□□□ -0.69
AMBRA1-207ENST00000529553 ANK2Q01484 3957 aa10.71□□□□□ -0.7
AMBRA1-207ENST00000529553 TRBC2A0A5B9 178 aa10.7□□□□□ -0.7
AMBRA1-207ENST00000529553 EEF1E1-BLOC1S5C9J1V9 151 aa10.7□□□□□ -0.7
AMBRA1-207ENST00000529553 E5RI56 91 aa10.7□□□□□ -0.7
AMBRA1-207ENST00000529553 EEF1E1O43324 174 aaKnown RBP10.7□□□□□ -0.7
AMBRA1-207ENST00000529553 OR1F1O43749 312 aa10.7□□□□□ -0.7
AMBRA1-207ENST00000529553 TLX2O43763 284 aaPredicted RBP10.7□□□□□ -0.7
AMBRA1-207ENST00000529553 CCL3P10147 92 aa10.7□□□□□ -0.7
AMBRA1-207ENST00000529553 NPPBP16860 134 aa10.7□□□□□ -0.7
AMBRA1-207ENST00000529553 AHRP35869 848 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms