RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 MAN2A2P49641 1150 aa8.36□□□□□ -1.07
VPS11-203ENST00000529545 SARNPP82979 210 aaKnown RBP8.36□□□□□ -1.07
VPS11-203ENST00000529545 HYAL2Q12891 473 aa8.36□□□□□ -1.07
VPS11-203ENST00000529545 NAE1Q13564 534 aa8.36□□□□□ -1.07
VPS11-203ENST00000529545 THOC5Q13769 683 aaKnown RBP8.36□□□□□ -1.07
VPS11-203ENST00000529545 SNTB1Q13884 538 aaKnown RBP8.36□□□□□ -1.07
VPS11-203ENST00000529545 SLC10A1Q14973 349 aa8.36□□□□□ -1.07
VPS11-203ENST00000529545 TERF2Q15554 542 aa8.36□□□□□ -1.07
VPS11-203ENST00000529545 PHKG1Q16816 387 aa8.36□□□□□ -1.07
VPS11-203ENST00000529545 DEFB113Q30KQ7 82 aa8.36□□□□□ -1.07
VPS11-203ENST00000529545 FLYWCH1Q4VC44 716 aa8.36□□□□□ -1.07
VPS11-203ENST00000529545 C1orf185Q5T7R7 199 aa8.36□□□□□ -1.07
VPS11-203ENST00000529545 KIAA0930Q6ICG6 404 aaPredicted RBP8.36□□□□□ -1.07
VPS11-203ENST00000529545 CASC4Q6P4E1 433 aa8.36□□□□□ -1.07
VPS11-203ENST00000529545 AGTRAPQ6RW13 159 aa8.36□□□□□ -1.07
VPS11-203ENST00000529545 LCTLQ6UWM7 567 aa8.36□□□□□ -1.07
VPS11-203ENST00000529545 PAMR1Q6UXH9 720 aa8.36□□□□□ -1.07
VPS11-203ENST00000529545 IL20RBQ6UXL0 311 aa8.36□□□□□ -1.07
VPS11-203ENST00000529545 CENPUQ71F23 418 aa8.36□□□□□ -1.07
VPS11-203ENST00000529545 PRUNE1Q86TP1 453 aa8.36□□□□□ -1.07
VPS11-203ENST00000529545 TXLNBQ8N3L3 684 aa8.36□□□□□ -1.07
VPS11-203ENST00000529545 FAM109AQ8N4B1 249 aa8.36□□□□□ -1.07
VPS11-203ENST00000529545 GPATCH11Q8N954 259 aa8.36□□□□□ -1.07
VPS11-203ENST00000529545 C1orf54Q8WWF1 131 aa8.36□□□□□ -1.07
VPS11-203ENST00000529545 HIST1H2AHQ96KK5 128 aa8.36□□□□□ -1.07
VPS11-203ENST00000529545 SLC30A3Q99726 388 aa8.36□□□□□ -1.07
VPS11-203ENST00000529545 HIST1H2AJQ99878 128 aa8.36□□□□□ -1.07
VPS11-203ENST00000529545 FAM173AQ9BQD7 235 aa8.36□□□□□ -1.07
VPS11-203ENST00000529545 H2AFJQ9BTM1 129 aa8.36□□□□□ -1.07
VPS11-203ENST00000529545 TTTY12Q9BZ98 90 aa8.36□□□□□ -1.07
VPS11-203ENST00000529545 ATG10Q9H0Y0 220 aa8.36□□□□□ -1.07
VPS11-203ENST00000529545 NEUROD4Q9HD90 331 aa8.36□□□□□ -1.07
VPS11-203ENST00000529545 PNO1Q9NRX1 252 aaKnown RBP8.36□□□□□ -1.07
VPS11-203ENST00000529545 DEPPQ9NTK1 212 aa8.36□□□□□ -1.07
VPS11-203ENST00000529545 SYBUQ9NX95 663 aa8.36□□□□□ -1.07
VPS11-203ENST00000529545 CRIM1Q9NZV1 1036 aa8.36□□□□□ -1.07
VPS11-203ENST00000529545 ZFATQ9P243 1243 aa8.36□□□□□ -1.07
VPS11-203ENST00000529545 SOX13Q9UN79 622 aa8.36□□□□□ -1.07
VPS11-203ENST00000529545 MMACHCQ9Y4U1 282 aa8.36□□□□□ -1.07
VPS11-203ENST00000529545 FAM215AQ9Y5M1 114 aa8.36□□□□□ -1.07
VPS11-203ENST00000529545 COMMD10Q9Y6G5 202 aa8.36□□□□□ -1.07
VPS11-203ENST00000529545 IGKV3D-11A0A0A0MRZ8 115 aa8.35□□□□□ -1.07
VPS11-203ENST00000529545 TRBC2A0A5B9 178 aa8.35□□□□□ -1.07
VPS11-203ENST00000529545 HSPB2A8KAH6 182 aa8.35□□□□□ -1.07
VPS11-203ENST00000529545 EIF3FO00303 357 aaPredicted RBP8.35□□□□□ -1.07
VPS11-203ENST00000529545 SYT5O00445 386 aa8.35□□□□□ -1.07
VPS11-203ENST00000529545 CLDN4O14493 209 aa8.35□□□□□ -1.07
VPS11-203ENST00000529545 AQP7O14520 342 aa8.35□□□□□ -1.07
VPS11-203ENST00000529545 DVL2O14641 736 aa8.35□□□□□ -1.07
VPS11-203ENST00000529545 SUSD5O60279 629 aa8.35□□□□□ -1.07
VPS11-203ENST00000529545 LILRA1O75019 489 aa8.35□□□□□ -1.07
VPS11-203ENST00000529545 DNAJB6O75190 326 aa8.35□□□□□ -1.07
VPS11-203ENST00000529545 OR2J2O76002 312 aa8.35□□□□□ -1.07
VPS11-203ENST00000529545 FTCDO95954 541 aa8.35□□□□□ -1.07
VPS11-203ENST00000529545 IGHG3P01860 377 aa8.35□□□□□ -1.07
VPS11-203ENST00000529545 ZSCAN5DPP0CG00 497 aa8.35□□□□□ -1.07
VPS11-203ENST00000529545 CNR1P21554 472 aa8.35□□□□□ -1.07
VPS11-203ENST00000529545 ADH7P40394 386 aa8.35□□□□□ -1.07
VPS11-203ENST00000529545 MAGEA5P43359 124 aa8.35□□□□□ -1.07
VPS11-203ENST00000529545 RGS4P49798 205 aa8.35□□□□□ -1.07
VPS11-203ENST00000529545 CDK16Q00536 496 aa8.35□□□□□ -1.07
VPS11-203ENST00000529545 HSPB2Q16082 182 aa8.35□□□□□ -1.07
VPS11-203ENST00000529545 RIPPLY2Q5TAB7 128 aa8.35□□□□□ -1.07
VPS11-203ENST00000529545 ARMC3Q5W041 872 aa8.35□□□□□ -1.07
VPS11-203ENST00000529545 ZNF470Q6ECI4 717 aa8.35□□□□□ -1.07
VPS11-203ENST00000529545 RTL6Q6ICC9 239 aa8.35□□□□□ -1.07
VPS11-203ENST00000529545 UGT3A1Q6NUS8 523 aa8.35□□□□□ -1.07
VPS11-203ENST00000529545 CYHR1Q6ZMK1 362 aa8.35□□□□□ -1.07
VPS11-203ENST00000529545 FAM47EQ6ZV65 393 aa8.35□□□□□ -1.07
VPS11-203ENST00000529545 TRILQ7L0X0 811 aa8.35□□□□□ -1.07
VPS11-203ENST00000529545 GSTA5Q7RTV2 222 aa8.35□□□□□ -1.07
VPS11-203ENST00000529545 PIWIL4Q7Z3Z4 852 aaKnown RBP8.35□□□□□ -1.07
VPS11-203ENST00000529545 STRA8Q7Z7C7 330 aa8.35□□□□□ -1.07
VPS11-203ENST00000529545 LIX1LQ8IVB5 337 aa8.35□□□□□ -1.07
VPS11-203ENST00000529545 CPNE9Q8IYJ1 553 aa8.35□□□□□ -1.07
VPS11-203ENST00000529545 APCDD1LQ8NCL9 501 aa8.35□□□□□ -1.07
VPS11-203ENST00000529545 WFDC11Q8NEX6 87 aa8.35□□□□□ -1.07
VPS11-203ENST00000529545 ABHD11Q8NFV4 315 aa8.35□□□□□ -1.07
VPS11-203ENST00000529545 GIMAP7Q8NHV1 300 aa8.35□□□□□ -1.07
VPS11-203ENST00000529545 NT5CQ8TCD5 201 aa8.35□□□□□ -1.07
VPS11-203ENST00000529545 NUDT8Q8WV74 236 aa8.35□□□□□ -1.07
VPS11-203ENST00000529545 NCLNQ969V3 563 aa8.35□□□□□ -1.07
VPS11-203ENST00000529545 GPR21Q99679 349 aa8.35□□□□□ -1.07
VPS11-203ENST00000529545 LACRTQ9GZZ8 138 aa8.35□□□□□ -1.07
VPS11-203ENST00000529545 IL1RL2Q9HB29 575 aa8.35□□□□□ -1.07
VPS11-203ENST00000529545 PARVBQ9HBI1 364 aa8.35□□□□□ -1.07
VPS11-203ENST00000529545 DMRT3Q9NQL9 472 aa8.35□□□□□ -1.07
VPS11-203ENST00000529545 NECTIN3Q9NQS3 549 aa8.35□□□□□ -1.07
VPS11-203ENST00000529545 TRMT6Q9UJA5 497 aaKnown RBP8.35□□□□□ -1.07
VPS11-203ENST00000529545 ZFP69BQ9UJL9 534 aa8.35□□□□□ -1.07
VPS11-203ENST00000529545 SH2B3Q9UQQ2 575 aa8.35□□□□□ -1.07
VPS11-203ENST00000529545 PDE10AQ9Y233 779 aa8.35□□□□□ -1.07
VPS11-203ENST00000529545 DNHD1Q96M86 4753 aa8.34□□□□□ -1.07
VPS11-203ENST00000529545 A0A1B0GVC2 190 aa8.34□□□□□ -1.07
VPS11-203ENST00000529545 ATP6AP2A0A1C7CYW4 349 aa8.34□□□□□ -1.07
VPS11-203ENST00000529545 PINLYPA6NC86 204 aa8.34□□□□□ -1.07
VPS11-203ENST00000529545 SYNDIG1LA6NDD5 238 aa8.34□□□□□ -1.07
VPS11-203ENST00000529545 G3V3Y1 287 aa8.34□□□□□ -1.07
VPS11-203ENST00000529545 ARHGEF9O43307 516 aa8.34□□□□□ -1.07
VPS11-203ENST00000529545 ATP6AP2O75787 350 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms