RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 MBL2P11226 248 aaPredicted RBP4.46□□□□□ -1.7
CSDE1-212ENST00000529046 CMA1P23946 247 aa4.46□□□□□ -1.7
CSDE1-212ENST00000529046 HOXC13P31276 330 aa4.46□□□□□ -1.7
CSDE1-212ENST00000529046 ATP5C1P36542 298 aaKnown RBP4.46□□□□□ -1.7
CSDE1-212ENST00000529046 FUT6P51993 359 aa4.46□□□□□ -1.7
CSDE1-212ENST00000529046 IRX4P78413 519 aa4.46□□□□□ -1.7
CSDE1-212ENST00000529046 STK4Q13043 487 aa4.46□□□□□ -1.7
CSDE1-212ENST00000529046 DUOXA1Q1HG43 343 aa4.46□□□□□ -1.7
CSDE1-212ENST00000529046 ZNF699Q32M78 642 aa4.46□□□□□ -1.7
CSDE1-212ENST00000529046 UNQ6126/PRO20091Q6UXV3 157 aa4.46□□□□□ -1.7
CSDE1-212ENST00000529046 INTS8Q75QN2 995 aaKnown RBP4.46□□□□□ -1.7
CSDE1-212ENST00000529046 CCDC186Q7Z3E2 898 aa4.46□□□□□ -1.7
CSDE1-212ENST00000529046 TMPRSS12Q86WS5 348 aa4.46□□□□□ -1.7
CSDE1-212ENST00000529046 SCML4Q8N228 414 aa4.46□□□□□ -1.7
CSDE1-212ENST00000529046 EMC1Q8N766 993 aa4.46□□□□□ -1.7
CSDE1-212ENST00000529046 POC5Q8NA72 575 aa4.46□□□□□ -1.7
CSDE1-212ENST00000529046 FBXO32Q969P5 355 aa4.46□□□□□ -1.7
CSDE1-212ENST00000529046 SLC22A18Q96BI1 424 aa4.46□□□□□ -1.7
CSDE1-212ENST00000529046 MOAP1Q96BY2 351 aa4.46□□□□□ -1.7
CSDE1-212ENST00000529046 DHX58Q96C10 678 aa4.46□□□□□ -1.7
CSDE1-212ENST00000529046 XPO6Q96QU8 1125 aaKnown RBP4.46□□□□□ -1.7
CSDE1-212ENST00000529046 KCNK16Q96T55 309 aa4.46□□□□□ -1.7
CSDE1-212ENST00000529046 GABRG3Q99928 467 aa4.46□□□□□ -1.7
CSDE1-212ENST00000529046 NUSAP1Q9BXS6 441 aaKnown RBP4.46□□□□□ -1.7
CSDE1-212ENST00000529046 DNAI2Q9GZS0 605 aa4.46□□□□□ -1.7
CSDE1-212ENST00000529046 DPEP3Q9H4B8 488 aa4.46□□□□□ -1.7
CSDE1-212ENST00000529046 EVA1AQ9H8M9 152 aa4.46□□□□□ -1.7
CSDE1-212ENST00000529046 GIMAP4Q9NUV9 329 aa4.46□□□□□ -1.7
CSDE1-212ENST00000529046 CLIC5Q9NZA1 410 aa4.46□□□□□ -1.7
CSDE1-212ENST00000529046 CHORDC1Q9UHD1 332 aaPredicted RBP4.46□□□□□ -1.7
CSDE1-212ENST00000529046 PILRBQ9UKJ0 227 aa4.46□□□□□ -1.7
CSDE1-212ENST00000529046 KCNS2Q9ULS6 477 aa4.46□□□□□ -1.7
CSDE1-212ENST00000529046 PLAGL1Q9UM63 463 aa4.46□□□□□ -1.7
CSDE1-212ENST00000529046 TMEM5Q9Y2B1 443 aa4.46□□□□□ -1.7
CSDE1-212ENST00000529046 OR2W1Q9Y3N9 320 aa4.46□□□□□ -1.7
CSDE1-212ENST00000529046 NEUROG3Q9Y4Z2 214 aa4.46□□□□□ -1.7
CSDE1-212ENST00000529046 ANAPC1Q9H1A4 1944 aa4.46□□□□□ -1.7
CSDE1-212ENST00000529046 ACACBO00763 2458 aa4.46□□□□□ -1.7
CSDE1-212ENST00000529046 PTPRDP23468 1912 aa4.45□□□□□ -1.7
CSDE1-212ENST00000529046 TCHHQ07283 1943 aa4.45□□□□□ -1.7
CSDE1-212ENST00000529046 SAA2-SAA4A0A096LPE2 208 aa4.45□□□□□ -1.7
CSDE1-212ENST00000529046 A0A1W2PS18 150 aa4.45□□□□□ -1.7
CSDE1-212ENST00000529046 GLOD5A6NK44 160 aa4.45□□□□□ -1.7
CSDE1-212ENST00000529046 PRAC2D3DTV9 90 aa4.45□□□□□ -1.7
CSDE1-212ENST00000529046 CLDN5O00501 218 aa4.45□□□□□ -1.7
CSDE1-212ENST00000529046 DVL1O14640 695 aa4.45□□□□□ -1.7
CSDE1-212ENST00000529046 ADAMDEC1O15204 470 aa4.45□□□□□ -1.7
CSDE1-212ENST00000529046 CLIC2O15247 247 aa4.45□□□□□ -1.7
CSDE1-212ENST00000529046 BEST1O76090 585 aa4.45□□□□□ -1.7
CSDE1-212ENST00000529046 KLF8O95600 359 aaPredicted RBP4.45□□□□□ -1.7
CSDE1-212ENST00000529046 PENKP01210 267 aaPredicted RBP4.45□□□□□ -1.7
CSDE1-212ENST00000529046 CISD3P0C7P0 127 aa4.45□□□□□ -1.7
CSDE1-212ENST00000529046 ZNF883P0CG24 379 aa4.45□□□□□ -1.7
CSDE1-212ENST00000529046 CDH1P12830 882 aa4.45□□□□□ -1.7
CSDE1-212ENST00000529046 MMP9P14780 707 aa4.45□□□□□ -1.7
CSDE1-212ENST00000529046 ZNF23P17027 643 aa4.45□□□□□ -1.7
CSDE1-212ENST00000529046 GABRG2P18507 467 aa4.45□□□□□ -1.7
CSDE1-212ENST00000529046 BCKDHBP21953 392 aa4.45□□□□□ -1.7
CSDE1-212ENST00000529046 RDXP35241 583 aaKnown RBP4.45□□□□□ -1.7
CSDE1-212ENST00000529046 NOVA1P51513 510 aaKnown RBP4.45□□□□□ -1.7
CSDE1-212ENST00000529046 NDST1P52848 882 aa4.45□□□□□ -1.7
CSDE1-212ENST00000529046 EEF1A1P68104 462 aaKnown RBP4.45□□□□□ -1.7
CSDE1-212ENST00000529046 COG7P83436 770 aa4.45□□□□□ -1.7
CSDE1-212ENST00000529046 GTF2H2Q13888 395 aa4.45□□□□□ -1.7
CSDE1-212ENST00000529046 NTRK2Q16620 822 aa4.45□□□□□ -1.7
CSDE1-212ENST00000529046 MPP7Q5T2T1 576 aa4.45□□□□□ -1.7
CSDE1-212ENST00000529046 EEF1A1P5Q5VTE0 462 aa4.45□□□□□ -1.7
CSDE1-212ENST00000529046 LYSMD4Q5XG99 296 aa4.45□□□□□ -1.7
CSDE1-212ENST00000529046 PM20D1Q6GTS8 502 aa4.45□□□□□ -1.7
CSDE1-212ENST00000529046 GTF2H2CQ6P1K8 395 aa4.45□□□□□ -1.7
CSDE1-212ENST00000529046 CLEC20AQ6ZU45 233 aa4.45□□□□□ -1.7
CSDE1-212ENST00000529046 FOXL2NBQ6ZUU3 175 aa4.45□□□□□ -1.7
CSDE1-212ENST00000529046 ZNF771Q7L3S4 317 aaPredicted RBP4.45□□□□□ -1.7
CSDE1-212ENST00000529046 GLRX5Q86SX6 157 aa4.45□□□□□ -1.7
CSDE1-212ENST00000529046 CCDC190Q86UF4 302 aa4.45□□□□□ -1.7
CSDE1-212ENST00000529046 TMEM25Q86YD3 366 aa4.45□□□□□ -1.7
CSDE1-212ENST00000529046 BBS7Q8IWZ6 715 aa4.45□□□□□ -1.7
CSDE1-212ENST00000529046 NELFCDQ8IXH7 590 aa4.45□□□□□ -1.7
CSDE1-212ENST00000529046 CEP57L1Q8IYX8 460 aa4.45□□□□□ -1.7
CSDE1-212ENST00000529046 MUC20Q8N307 709 aaPredicted RBP4.45□□□□□ -1.7
CSDE1-212ENST00000529046 GUF1Q8N442 669 aaKnown RBP4.45□□□□□ -1.7
CSDE1-212ENST00000529046 ALLCQ8N6M5 410 aa4.45□□□□□ -1.7
CSDE1-212ENST00000529046 KIAA0895Q8NCT3 520 aa4.45□□□□□ -1.7
CSDE1-212ENST00000529046 SLC38A5Q8WUX1 472 aa4.45□□□□□ -1.7
CSDE1-212ENST00000529046 CCDC127Q96BQ5 260 aa4.45□□□□□ -1.7
CSDE1-212ENST00000529046 PAGE5Q96GU1 130 aa4.45□□□□□ -1.7
CSDE1-212ENST00000529046 DUSP16Q9BY84 665 aa4.45□□□□□ -1.7
CSDE1-212ENST00000529046 MRPL1Q9BYD6 325 aaKnown RBP4.45□□□□□ -1.7
CSDE1-212ENST00000529046 SLC2A11Q9BYW1 496 aa4.45□□□□□ -1.7
CSDE1-212ENST00000529046 RETREG1Q9H6L5 497 aa4.45□□□□□ -1.7
CSDE1-212ENST00000529046 PSD3Q9NYI0 1048 aa4.45□□□□□ -1.7
CSDE1-212ENST00000529046 KLHL9Q9P2J3 617 aa4.45□□□□□ -1.7
CSDE1-212ENST00000529046 MALT1Q9UDY8 824 aa4.45□□□□□ -1.7
CSDE1-212ENST00000529046 STOML2Q9UJZ1 356 aa4.45□□□□□ -1.7
CSDE1-212ENST00000529046 LSM7Q9UK45 103 aaKnown RBP4.45□□□□□ -1.7
CSDE1-212ENST00000529046 TPRP12270 2363 aaKnown RBP4.45□□□□□ -1.7
CSDE1-212ENST00000529046 PLXND1Q9Y4D7 1925 aa4.44□□□□□ -1.7
CSDE1-212ENST00000529046 KIAA1549LQ6ZVL6 1849 aa4.44□□□□□ -1.7
CSDE1-212ENST00000529046 EML5Q05BV3 1969 aa4.44□□□□□ -1.7
CSDE1-212ENST00000529046 SPAG17Q6Q759 2223 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms