RNA–Protein interactions for RNA: ENST00000528910.5

USP35-202, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 1,209 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-202ENST00000528910 SCUBE1Q8IWY4 988 aa16.3■□□□□ 0.2
USP35-202ENST00000528910 OR52B6Q8NGF0 335 aa16.3■□□□□ 0.2
USP35-202ENST00000528910 WDR20Q8TBZ3 569 aa16.3■□□□□ 0.2
USP35-202ENST00000528910 BRIX1Q8TDN6 353 aaKnown RBP16.3■□□□□ 0.2
USP35-202ENST00000528910 ZNF483Q8TF39 744 aaPredicted RBP16.3■□□□□ 0.2
USP35-202ENST00000528910 AENQ8WTP8 325 aaKnown RBP16.3■□□□□ 0.2
USP35-202ENST00000528910 NSUN5Q96P11 429 aaKnown RBP16.3■□□□□ 0.2
USP35-202ENST00000528910 TBCDQ9BTW9 1192 aa16.3■□□□□ 0.2
USP35-202ENST00000528910 NOL11Q9H8H0 719 aaKnown RBP16.3■□□□□ 0.2
USP35-202ENST00000528910 COPS7BQ9H9Q2 264 aaPredicted RBP16.3■□□□□ 0.2
USP35-202ENST00000528910 PRDM9Q9NQV7 894 aa16.3■□□□□ 0.2
USP35-202ENST00000528910 TBK1Q9UHD2 729 aa16.3■□□□□ 0.2
USP35-202ENST00000528910 PPT2Q9UMR5 302 aa16.3■□□□□ 0.2
USP35-202ENST00000528910 DAPP1Q9UN19 280 aa16.3■□□□□ 0.2
USP35-202ENST00000528910 B3GNT3Q9Y2A9 372 aa16.3■□□□□ 0.2
USP35-202ENST00000528910 CLDN16Q9Y5I7 305 aa16.3■□□□□ 0.2
USP35-202ENST00000528910 TCRBV16S1A1N1A0A5B0 115 aa16.29■□□□□ 0.2
USP35-202ENST00000528910 GOLGA8RI6L899 631 aa16.29■□□□□ 0.2
USP35-202ENST00000528910 PRMT3O60678 531 aa16.29■□□□□ 0.2
USP35-202ENST00000528910 CLDN9O95484 217 aa16.29■□□□□ 0.2
USP35-202ENST00000528910 NUDT17P0C025 328 aa16.29■□□□□ 0.2
USP35-202ENST00000528910 ITGAMP11215 1152 aa16.29■□□□□ 0.2
USP35-202ENST00000528910 PYGBP11216 843 aa16.29■□□□□ 0.2
USP35-202ENST00000528910 HSD17B3P37058 310 aa16.29■□□□□ 0.2
USP35-202ENST00000528910 TSFMP43897 325 aaKnown RBP16.29■□□□□ 0.2
USP35-202ENST00000528910 LIM2P55344 173 aa16.29■□□□□ 0.2
USP35-202ENST00000528910 HERVK_113P63132 956 aa16.29■□□□□ 0.2
USP35-202ENST00000528910 BTG2P78543 158 aa16.29■□□□□ 0.2
USP35-202ENST00000528910 PHEXP78562 749 aa16.29■□□□□ 0.2
USP35-202ENST00000528910 FOXK1P85037 733 aa16.29■□□□□ 0.2
USP35-202ENST00000528910 EXT1Q16394 746 aa16.29■□□□□ 0.2
USP35-202ENST00000528910 C10orf62Q5T681 223 aaPredicted RBP16.29■□□□□ 0.2
USP35-202ENST00000528910 ZADH2Q8N4Q0 377 aa16.29■□□□□ 0.2
USP35-202ENST00000528910 EPS8L3Q8TE67 593 aaKnown RBP16.29■□□□□ 0.2
USP35-202ENST00000528910 LMF1Q96S06 567 aa16.29■□□□□ 0.2
USP35-202ENST00000528910 LPAR4Q99677 370 aa16.29■□□□□ 0.2
USP35-202ENST00000528910 ERVK-6Q9BXR3 956 aa16.29■□□□□ 0.2
USP35-202ENST00000528910 EPS8L2Q9H6S3 715 aa16.29■□□□□ 0.2
USP35-202ENST00000528910 LYRM4Q9HD34 91 aa16.29■□□□□ 0.2
USP35-202ENST00000528910 RNF11Q9Y3C5 154 aa16.29■□□□□ 0.2
USP35-202ENST00000528910 NBASA2RRP1 2371 aa16.29■□□□□ 0.2
USP35-202ENST00000528910 FAM227AF5H4B4 570 aa16.28■□□□□ 0.2
USP35-202ENST00000528910 CYR61O00622 381 aa16.28■□□□□ 0.2
USP35-202ENST00000528910 CDH16O75309 829 aa16.28■□□□□ 0.2
USP35-202ENST00000528910 GLRA3O75311 464 aa16.28■□□□□ 0.2
USP35-202ENST00000528910 TGFB1P01137 390 aa16.28■□□□□ 0.2
USP35-202ENST00000528910 TAC1P20366 129 aa16.28■□□□□ 0.2
USP35-202ENST00000528910 MAOAP21397 527 aa16.28■□□□□ 0.2
USP35-202ENST00000528910 HIST1H1TP22492 207 aaPredicted RBP16.28■□□□□ 0.2
USP35-202ENST00000528910 ATP5A1P25705 553 aaKnown RBP16.28■□□□□ 0.2
USP35-202ENST00000528910 SLCO1A2P46721 670 aa16.28■□□□□ 0.2
USP35-202ENST00000528910 CCNG1P51959 295 aa16.28■□□□□ 0.2
USP35-202ENST00000528910 HSD17B7P56937 341 aa16.28■□□□□ 0.2
USP35-202ENST00000528910 OR4D2P58180 307 aa16.28■□□□□ 0.2
USP35-202ENST00000528910 DDX39BQ13838 428 aaKnown RBP16.28■□□□□ 0.2
USP35-202ENST00000528910 ZRSR2Q15696 482 aaKnown RBP16.28■□□□□ 0.2
USP35-202ENST00000528910 CPSF6Q16630 551 aaKnown RBP eCLIP16.28■□□□□ 0.2
USP35-202ENST00000528910 DEPDC1Q5TB30 811 aa16.28■□□□□ 0.2
USP35-202ENST00000528910 EMBQ6PCB8 327 aa16.28■□□□□ 0.2
USP35-202ENST00000528910 CHSY3Q70JA7 882 aa16.28■□□□□ 0.2
USP35-202ENST00000528910 RNF175Q8N4F7 328 aa16.28■□□□□ 0.2
USP35-202ENST00000528910 MIB2Q96AX9 1013 aa16.28■□□□□ 0.2
USP35-202ENST00000528910 PTCHD1Q96NR3 888 aa16.28■□□□□ 0.2
USP35-202ENST00000528910 CSF3RQ99062 836 aa16.28■□□□□ 0.2
USP35-202ENST00000528910 MTERF1Q99551 399 aaKnown RBP16.28■□□□□ 0.2
USP35-202ENST00000528910 ZNF717Q9BY31 904 aaPredicted RBP16.28■□□□□ 0.2
USP35-202ENST00000528910 MFRPQ9BY79 579 aa16.28■□□□□ 0.2
USP35-202ENST00000528910 RNF32Q9H0A6 362 aa16.28■□□□□ 0.2
USP35-202ENST00000528910 OR51B5Q9H339 312 aa16.28■□□□□ 0.2
USP35-202ENST00000528910 MMP25Q9NPA2 562 aa16.28■□□□□ 0.2
USP35-202ENST00000528910 NECTIN3Q9NQS3 549 aa16.28■□□□□ 0.2
USP35-202ENST00000528910 PSD3Q9NYI0 1048 aa16.28■□□□□ 0.2
USP35-202ENST00000528910 MRPS33Q9Y291 106 aaKnown RBP16.28■□□□□ 0.2
USP35-202ENST00000528910 CSAG2Q9Y5P2 127 aa16.28■□□□□ 0.2
USP35-202ENST00000528910 A0A1W2PPM1 405 aa16.27■□□□□ 0.2
USP35-202ENST00000528910 SYNDIG1LA6NDD5 238 aa16.27■□□□□ 0.2
USP35-202ENST00000528910 SAGE2PA6NJ88 616 aa16.27■□□□□ 0.2
USP35-202ENST00000528910 FOXE1O00358 373 aaPredicted RBP16.27■□□□□ 0.2
USP35-202ENST00000528910 RTCAO00442 366 aaKnown RBP16.27■□□□□ 0.2
USP35-202ENST00000528910 PLPP1O14494 284 aa16.27■□□□□ 0.2
USP35-202ENST00000528910 WISP1O95388 367 aa16.27■□□□□ 0.2
USP35-202ENST00000528910 OTCP00480 354 aa16.27■□□□□ 0.2
USP35-202ENST00000528910 ATP5F1P24539 256 aaPredicted RBP16.27■□□□□ 0.2
USP35-202ENST00000528910 SSR2P43308 183 aa16.27■□□□□ 0.2
USP35-202ENST00000528910 HNRNPFP52597 415 aaKnown RBP16.27■□□□□ 0.2
USP35-202ENST00000528910 SLC26A5P58743 744 aa16.27■□□□□ 0.2
USP35-202ENST00000528910 RPS13P62277 151 aaKnown RBP16.27■□□□□ 0.2
USP35-202ENST00000528910 CUL3Q13618 768 aa16.27■□□□□ 0.2
USP35-202ENST00000528910 RCN2Q14257 317 aa16.27■□□□□ 0.2
USP35-202ENST00000528910 BTBD16Q32M84 506 aa16.27■□□□□ 0.2
USP35-202ENST00000528910 H3F3CQ6NXT2 135 aa16.27■□□□□ 0.2
USP35-202ENST00000528910 ZNF595Q8IYB9 648 aa16.27■□□□□ 0.2
USP35-202ENST00000528910 CYP4X1Q8N118 509 aa16.27■□□□□ 0.2
USP35-202ENST00000528910 ZCCHC7Q8N3Z6 543 aaKnown RBP16.27■□□□□ 0.2
USP35-202ENST00000528910 SIRT6Q8N6T7 355 aa16.27■□□□□ 0.2
USP35-202ENST00000528910 AMER2Q8N7J2 671 aa16.27■□□□□ 0.2
USP35-202ENST00000528910 ACOT4Q8N9L9 421 aa16.27■□□□□ 0.2
USP35-202ENST00000528910 FAM47BQ8NA70 645 aa16.27■□□□□ 0.2
USP35-202ENST00000528910 TMEM52Q8NDY8 209 aa16.27■□□□□ 0.2
USP35-202ENST00000528910 ARMC2Q8NEN0 867 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms