RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 SNAPC1Q16533 368 aa5.29□□□□□ -1.56
PCF11-202ENST00000528336 DPYSL2Q16555 572 aa5.29□□□□□ -1.56
PCF11-202ENST00000528336 KRT71Q3SY84 523 aa5.29□□□□□ -1.56
PCF11-202ENST00000528336 FILIP1LQ4L180 1135 aa5.29□□□□□ -1.56
PCF11-202ENST00000528336 LRRC23Q53EV4 343 aaPredicted RBP5.29□□□□□ -1.56
PCF11-202ENST00000528336 RNASEH2BQ5TBB1 312 aaKnown RBP5.29□□□□□ -1.56
PCF11-202ENST00000528336 NOTUMQ6P988 496 aa5.29□□□□□ -1.56
PCF11-202ENST00000528336 AFTPHQ6ULP2 937 aa5.29□□□□□ -1.56
PCF11-202ENST00000528336 KLHL7Q8IXQ5 586 aa5.29□□□□□ -1.56
PCF11-202ENST00000528336 TIGD4Q8IY51 512 aa5.29□□□□□ -1.56
PCF11-202ENST00000528336 PDCL2Q8N4E4 241 aa5.29□□□□□ -1.56
PCF11-202ENST00000528336 SUN5Q8TC36 379 aa5.29□□□□□ -1.56
PCF11-202ENST00000528336 CHURC1Q8WUH1 139 aa5.29□□□□□ -1.56
PCF11-202ENST00000528336 DNASE1L2Q92874 299 aa5.29□□□□□ -1.56
PCF11-202ENST00000528336 SLAMF9Q96A28 289 aa5.29□□□□□ -1.56
PCF11-202ENST00000528336 SENP5Q96HI0 755 aaPredicted RBP5.29□□□□□ -1.56
PCF11-202ENST00000528336 EPSTI1Q96J88 318 aa5.29□□□□□ -1.56
PCF11-202ENST00000528336 F2RL3Q96RI0 385 aa5.29□□□□□ -1.56
PCF11-202ENST00000528336 CCDC77Q9BR77 488 aa5.29□□□□□ -1.56
PCF11-202ENST00000528336 LMF2Q9BU23 707 aaKnown RBP5.29□□□□□ -1.56
PCF11-202ENST00000528336 PUS3Q9BZE2 481 aaKnown RBP5.29□□□□□ -1.56
PCF11-202ENST00000528336 POLR1EQ9GZS1 481 aaKnown RBP5.29□□□□□ -1.56
PCF11-202ENST00000528336 THAP2Q9H0W7 228 aa5.29□□□□□ -1.56
PCF11-202ENST00000528336 GORASP2Q9H8Y8 452 aa5.29□□□□□ -1.56
PCF11-202ENST00000528336 NGBQ9NPG2 151 aa5.29□□□□□ -1.56
PCF11-202ENST00000528336 PNPLA3Q9NST1 481 aa5.29□□□□□ -1.56
PCF11-202ENST00000528336 P4HTMQ9NXG6 502 aa5.29□□□□□ -1.56
PCF11-202ENST00000528336 ERAP1Q9NZ08 941 aa5.29□□□□□ -1.56
PCF11-202ENST00000528336 ANKMY1Q9P2S6 941 aa5.29□□□□□ -1.56
PCF11-202ENST00000528336 TRMT6Q9UJA5 497 aaKnown RBP5.29□□□□□ -1.56
PCF11-202ENST00000528336 ITGA11Q9UKX5 1188 aa5.29□□□□□ -1.56
PCF11-202ENST00000528336 U3KQV3 271 aa5.29□□□□□ -1.56
PCF11-202ENST00000528336 RTL1A6NKG5 1358 aa5.29□□□□□ -1.56
PCF11-202ENST00000528336 KIF24Q5T7B8 1368 aa5.29□□□□□ -1.56
PCF11-202ENST00000528336 AFF2P51816 1311 aa5.28□□□□□ -1.56
PCF11-202ENST00000528336 MAP3K19Q56UN5 1328 aa5.28□□□□□ -1.56
PCF11-202ENST00000528336 KIF20BQ96Q89 1820 aa5.28□□□□□ -1.56
PCF11-202ENST00000528336 BCL9LQ86UU0 1499 aa5.28□□□□□ -1.56
PCF11-202ENST00000528336 TRBV2A0A0J9YWF9 115 aa5.28□□□□□ -1.56
PCF11-202ENST00000528336 EDDM13A0A1B0GTR0 161 aa5.28□□□□□ -1.56
PCF11-202ENST00000528336 PRR32B1ATL7 298 aa5.28□□□□□ -1.56
PCF11-202ENST00000528336 E9PI62 339 aa5.28□□□□□ -1.56
PCF11-202ENST00000528336 F8WDY8 70 aa5.28□□□□□ -1.56
PCF11-202ENST00000528336 CASC3O15234 703 aaKnown RBP5.28□□□□□ -1.56
PCF11-202ENST00000528336 KRT86O43790 486 aa5.28□□□□□ -1.56
PCF11-202ENST00000528336 CACNG3O60359 315 aa5.28□□□□□ -1.56
PCF11-202ENST00000528336 NMT2O60551 498 aa5.28□□□□□ -1.56
PCF11-202ENST00000528336 LIFP15018 202 aa5.28□□□□□ -1.56
PCF11-202ENST00000528336 VCLP18206 1134 aa5.28□□□□□ -1.56
PCF11-202ENST00000528336 ACHEP22303 614 aa5.28□□□□□ -1.56
PCF11-202ENST00000528336 CHRNB4P30926 498 aa5.28□□□□□ -1.56
PCF11-202ENST00000528336 SFNP31947 248 aa5.28□□□□□ -1.56
PCF11-202ENST00000528336 CCR1P32246 355 aa5.28□□□□□ -1.56
PCF11-202ENST00000528336 ACY1Q03154 408 aa5.28□□□□□ -1.56
PCF11-202ENST00000528336 KRT81Q14533 505 aa5.28□□□□□ -1.56
PCF11-202ENST00000528336 KIF26BQ2KJY2 2108 aa5.28□□□□□ -1.56
PCF11-202ENST00000528336 HERC4Q5GLZ8 1057 aaPredicted RBP5.28□□□□□ -1.56
PCF11-202ENST00000528336 TCTE1Q5JU00 501 aa5.28□□□□□ -1.56
PCF11-202ENST00000528336 ATAD3BQ5T9A4 648 aa5.28□□□□□ -1.56
PCF11-202ENST00000528336 C6orf163Q5TEZ5 329 aa5.28□□□□□ -1.56
PCF11-202ENST00000528336 FAM91A1Q658Y4 838 aa5.28□□□□□ -1.56
PCF11-202ENST00000528336 ZNF772Q68DY9 489 aaPredicted RBP5.28□□□□□ -1.56
PCF11-202ENST00000528336 METAP1DQ6UB28 335 aaPredicted RBP5.28□□□□□ -1.56
PCF11-202ENST00000528336 TMPRSS11FQ6ZWK6 438 aa5.28□□□□□ -1.56
PCF11-202ENST00000528336 ABI3BPQ7Z7G0 1075 aa5.28□□□□□ -1.56
PCF11-202ENST00000528336 ZNF554Q86TJ5 538 aa5.28□□□□□ -1.56
PCF11-202ENST00000528336 AMZ2Q86W34 360 aa5.28□□□□□ -1.56
PCF11-202ENST00000528336 CFAP206Q8IYR0 622 aa5.28□□□□□ -1.56
PCF11-202ENST00000528336 ZNF679Q8IYX0 411 aa5.28□□□□□ -1.56
PCF11-202ENST00000528336 TSPAN14Q8NG11 270 aa5.28□□□□□ -1.56
PCF11-202ENST00000528336 OR1J1Q8NGS3 322 aa5.28□□□□□ -1.56
PCF11-202ENST00000528336 OCC1Q8TAD7 63 aa5.28□□□□□ -1.56
PCF11-202ENST00000528336 ZNF671Q8TAW3 534 aa5.28□□□□□ -1.56
PCF11-202ENST00000528336 C14orf79Q96F83 325 aa5.28□□□□□ -1.56
PCF11-202ENST00000528336 SGK494Q96LW2 274 aa5.28□□□□□ -1.56
PCF11-202ENST00000528336 ZNF396Q96N95 335 aaPredicted RBP5.28□□□□□ -1.56
PCF11-202ENST00000528336 MS4A10Q96PG2 267 aa5.28□□□□□ -1.56
PCF11-202ENST00000528336 BCL7BQ9BQE9 202 aa5.28□□□□□ -1.56
PCF11-202ENST00000528336 LZTS2Q9BRK4 669 aa5.28□□□□□ -1.56
PCF11-202ENST00000528336 SLC39A3Q9BRY0 314 aa5.28□□□□□ -1.56
PCF11-202ENST00000528336 VN1R1Q9GZP7 353 aa5.28□□□□□ -1.56
PCF11-202ENST00000528336 FAM212BQ9NTI7 297 aaPredicted RBP5.28□□□□□ -1.56
PCF11-202ENST00000528336 HAO2Q9NYQ3 351 aa5.28□□□□□ -1.56
PCF11-202ENST00000528336 TRIM10Q9UDY6 481 aa5.28□□□□□ -1.56
PCF11-202ENST00000528336 FBXW2Q9UKT8 454 aa5.28□□□□□ -1.56
PCF11-202ENST00000528336 PLEKHA6Q9Y2H5 1048 aa5.28□□□□□ -1.56
PCF11-202ENST00000528336 STRAPQ9Y3F4 350 aaKnown RBP5.28□□□□□ -1.56
PCF11-202ENST00000528336 GRIP1Q9Y3R0 1128 aa5.28□□□□□ -1.56
PCF11-202ENST00000528336 COL14A1Q05707 1796 aaKnown RBP5.28□□□□□ -1.56
PCF11-202ENST00000528336 KIAA1217Q5T5P2 1943 aa5.28□□□□□ -1.56
PCF11-202ENST00000528336 ZSCAN5BA6NJL1 495 aa5.27□□□□□ -1.57
PCF11-202ENST00000528336 MEIS2O14770 477 aa5.27□□□□□ -1.57
PCF11-202ENST00000528336 SLC22A2O15244 555 aa5.27□□□□□ -1.57
PCF11-202ENST00000528336 CLDN3O15551 220 aa5.27□□□□□ -1.57
PCF11-202ENST00000528336 ERLIN1O75477 346 aa5.27□□□□□ -1.57
PCF11-202ENST00000528336 AK1P00568 194 aa5.27□□□□□ -1.57
PCF11-202ENST00000528336 MT-ATP6P00846 226 aa5.27□□□□□ -1.57
PCF11-202ENST00000528336 CD48P09326 243 aa5.27□□□□□ -1.57
PCF11-202ENST00000528336 ERVK-10P10266 1014 aa5.27□□□□□ -1.57
PCF11-202ENST00000528336 CDH3P22223 829 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms