RNA–Protein interactions for RNA: ENST00000523950.5

VEGFA-225, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-225ENST00000523950 MRPS33Q9Y291 106 aaKnown RBP11.84□□□□□ -0.51
VEGFA-225ENST00000523950 PLLPQ9Y342 182 aa11.84□□□□□ -0.51
VEGFA-225ENST00000523950 MMACHCQ9Y4U1 282 aa11.84□□□□□ -0.51
VEGFA-225ENST00000523950 SPACA6W5XKT8 324 aa11.84□□□□□ -0.51
VEGFA-225ENST00000523950 ITPR1Q14643 2758 aa11.84□□□□□ -0.51
VEGFA-225ENST00000523950 IGHV1-45A0A0A0MS14 117 aa11.83□□□□□ -0.52
VEGFA-225ENST00000523950 NSG1A0A0A6YYJ2 146 aa11.83□□□□□ -0.52
VEGFA-225ENST00000523950 JRKO75564 520 aa11.83□□□□□ -0.52
VEGFA-225ENST00000523950 B3GALT4O96024 378 aa11.83□□□□□ -0.52
VEGFA-225ENST00000523950 ENO1P06733 434 aaKnown RBP11.83□□□□□ -0.52
VEGFA-225ENST00000523950 COX6A1P12074 109 aa11.83□□□□□ -0.52
VEGFA-225ENST00000523950 ICAM2P13598 275 aa11.83□□□□□ -0.52
VEGFA-225ENST00000523950 HIST1H1TP22492 207 aaPredicted RBP11.83□□□□□ -0.52
VEGFA-225ENST00000523950 SSR2P43308 183 aa11.83□□□□□ -0.52
VEGFA-225ENST00000523950 CCL11P51671 97 aa11.83□□□□□ -0.52
VEGFA-225ENST00000523950 RAP1GDS1P52306 607 aa11.83□□□□□ -0.52
VEGFA-225ENST00000523950 RPS13P62277 151 aaKnown RBP11.83□□□□□ -0.52
VEGFA-225ENST00000523950 OLR1P78380 273 aa11.83□□□□□ -0.52
VEGFA-225ENST00000523950 RHAGQ02094 409 aa11.83□□□□□ -0.52
VEGFA-225ENST00000523950 CHAF1BQ13112 559 aa11.83□□□□□ -0.52
VEGFA-225ENST00000523950 MYBPC3Q14896 1274 aa11.83□□□□□ -0.52
VEGFA-225ENST00000523950 AP5B1Q2VPB7 878 aa11.83□□□□□ -0.52
VEGFA-225ENST00000523950 LACTB2Q53H82 288 aaPredicted RBP11.83□□□□□ -0.52
VEGFA-225ENST00000523950 IRAK1BP1Q5VVH5 260 aa11.83□□□□□ -0.52
VEGFA-225ENST00000523950 LIPMQ5VYY2 423 aa11.83□□□□□ -0.52
VEGFA-225ENST00000523950 LETMD1Q6P1Q0 360 aa11.83□□□□□ -0.52
VEGFA-225ENST00000523950 GPRIN3Q6ZVF9 776 aa11.83□□□□□ -0.52
VEGFA-225ENST00000523950 NDUFAF7Q7L592 441 aa11.83□□□□□ -0.52
VEGFA-225ENST00000523950 TMEM151BQ8IW70 566 aa11.83□□□□□ -0.52
VEGFA-225ENST00000523950 ZCCHC7Q8N3Z6 543 aaKnown RBP11.83□□□□□ -0.52
VEGFA-225ENST00000523950 GALNT16Q8N428 558 aa11.83□□□□□ -0.52
VEGFA-225ENST00000523950 ARMC2Q8NEN0 867 aa11.83□□□□□ -0.52
VEGFA-225ENST00000523950 TRPC4APQ8TEL6 797 aa11.83□□□□□ -0.52
VEGFA-225ENST00000523950 ZIM3Q96PE6 472 aa11.83□□□□□ -0.52
VEGFA-225ENST00000523950 MTERF1Q99551 399 aaKnown RBP11.83□□□□□ -0.52
VEGFA-225ENST00000523950 TUBB6Q9BUF5 446 aa11.83□□□□□ -0.52
VEGFA-225ENST00000523950 ZNF700Q9H0M5 742 aa11.83□□□□□ -0.52
VEGFA-225ENST00000523950 GSTO2Q9H4Y5 243 aa11.83□□□□□ -0.52
VEGFA-225ENST00000523950 ELOVL6Q9H5J4 265 aa11.83□□□□□ -0.52
VEGFA-225ENST00000523950 BRF2Q9HAW0 419 aa11.83□□□□□ -0.52
VEGFA-225ENST00000523950 SSU72Q9NP77 194 aaKnown RBP11.83□□□□□ -0.52
VEGFA-225ENST00000523950 PRDM9Q9NQV7 894 aa11.83□□□□□ -0.52
VEGFA-225ENST00000523950 OXSMQ9NWU1 459 aa11.83□□□□□ -0.52
VEGFA-225ENST00000523950 MS4A12Q9NXJ0 267 aa11.83□□□□□ -0.52
VEGFA-225ENST00000523950 GPR83Q9NYM4 423 aa11.83□□□□□ -0.52
VEGFA-225ENST00000523950 C5AR2Q9P296 337 aa11.83□□□□□ -0.52
VEGFA-225ENST00000523950 DAPP1Q9UN19 280 aa11.83□□□□□ -0.52
VEGFA-225ENST00000523950 ACTL7BQ9Y614 415 aa11.83□□□□□ -0.52
VEGFA-225ENST00000523950 MGAQ8IWI9 3026 aa11.83□□□□□ -0.52
VEGFA-225ENST00000523950 A0A0G2JN53 185 aa11.82□□□□□ -0.52
VEGFA-225ENST00000523950 CLDN4O14493 209 aa11.82□□□□□ -0.52
VEGFA-225ENST00000523950 DNAJB5O75953 348 aa11.82□□□□□ -0.52
VEGFA-225ENST00000523950 ESRRBO95718 433 aa11.82□□□□□ -0.52
VEGFA-225ENST00000523950 KRT6AP02538 564 aa11.82□□□□□ -0.52
VEGFA-225ENST00000523950 KRT6BP04259 564 aa11.82□□□□□ -0.52
VEGFA-225ENST00000523950 ALPPP05187 535 aa11.82□□□□□ -0.52
VEGFA-225ENST00000523950 MYZAPP0CAP1 466 aa11.82□□□□□ -0.52
VEGFA-225ENST00000523950 HSD3B1P14060 373 aa11.82□□□□□ -0.52
VEGFA-225ENST00000523950 ATP5A1P25705 553 aaKnown RBP11.82□□□□□ -0.52
VEGFA-225ENST00000523950 HSD3B2P26439 372 aa11.82□□□□□ -0.52
VEGFA-225ENST00000523950 CERS1P27544 350 aa11.82□□□□□ -0.52
VEGFA-225ENST00000523950 KRT6CP48668 564 aa11.82□□□□□ -0.52
VEGFA-225ENST00000523950 PGDP52209 483 aa11.82□□□□□ -0.52
VEGFA-225ENST00000523950 LIM2P55344 173 aa11.82□□□□□ -0.52
VEGFA-225ENST00000523950 HSD17B7P56937 341 aa11.82□□□□□ -0.52
VEGFA-225ENST00000523950 RUNX2Q13950 521 aa11.82□□□□□ -0.52
VEGFA-225ENST00000523950 CFAP157Q5JU67 520 aa11.82□□□□□ -0.52
VEGFA-225ENST00000523950 BEND6Q5SZJ8 279 aaPredicted RBP11.82□□□□□ -0.52
VEGFA-225ENST00000523950 CEP85LQ5SZL2 805 aa11.82□□□□□ -0.52
VEGFA-225ENST00000523950 OR4C11Q6IEV9 310 aa11.82□□□□□ -0.52
VEGFA-225ENST00000523950 RIPOR1Q6ZS17 1223 aa11.82□□□□□ -0.52
VEGFA-225ENST00000523950 FRMD7Q6ZUT3 714 aa11.82□□□□□ -0.52
VEGFA-225ENST00000523950 CPEB2Q7Z5Q1 589 aaKnown RBP11.82□□□□□ -0.52
VEGFA-225ENST00000523950 UBE3DQ7Z6J8 389 aa11.82□□□□□ -0.52
VEGFA-225ENST00000523950 ZNF595Q8IYB9 648 aa11.82□□□□□ -0.52
VEGFA-225ENST00000523950 PIAS4Q8N2W9 510 aaPredicted RBP11.82□□□□□ -0.52
VEGFA-225ENST00000523950 ACOT4Q8N9L9 421 aa11.82□□□□□ -0.52
VEGFA-225ENST00000523950 FDCSPQ8NFU4 85 aa11.82□□□□□ -0.52
VEGFA-225ENST00000523950 SREK1Q8WXA9 508 aaKnown RBP11.82□□□□□ -0.52
VEGFA-225ENST00000523950 PGM2Q96G03 612 aa11.82□□□□□ -0.52
VEGFA-225ENST00000523950 TRMOQ9BU70 441 aa11.82□□□□□ -0.52
VEGFA-225ENST00000523950 RBCK1Q9BYM8 510 aa11.82□□□□□ -0.52
VEGFA-225ENST00000523950 STMN4Q9H169 189 aaPredicted RBP11.82□□□□□ -0.52
VEGFA-225ENST00000523950 OR51B5Q9H339 312 aa11.82□□□□□ -0.52
VEGFA-225ENST00000523950 NMRK1Q9NWW6 199 aa11.82□□□□□ -0.52
VEGFA-225ENST00000523950 AHSPQ9NZD4 102 aa11.82□□□□□ -0.52
VEGFA-225ENST00000523950 PHF11Q9UIL8 331 aa11.82□□□□□ -0.52
VEGFA-225ENST00000523950 RALYQ9UKM9 306 aaKnown RBP11.82□□□□□ -0.52
VEGFA-225ENST00000523950 ZNF451Q9Y4E5 1061 aa11.82□□□□□ -0.52
VEGFA-225ENST00000523950 MED13Q9UHV7 2174 aa11.82□□□□□ -0.52
VEGFA-225ENST00000523950 CACNA1GO43497 2377 aa11.81□□□□□ -0.52
VEGFA-225ENST00000523950 PLPP1O14494 284 aa11.81□□□□□ -0.52
VEGFA-225ENST00000523950 TYROBPO43914 113 aa11.81□□□□□ -0.52
VEGFA-225ENST00000523950 PRMT3O60678 531 aa11.81□□□□□ -0.52
VEGFA-225ENST00000523950 TRIM13O60858 407 aa11.81□□□□□ -0.52
VEGFA-225ENST00000523950 DNAJB6O75190 326 aa11.81□□□□□ -0.52
VEGFA-225ENST00000523950 CDC123O75794 336 aaPredicted RBP11.81□□□□□ -0.52
VEGFA-225ENST00000523950 OR4F21O95013 312 aa11.81□□□□□ -0.52
VEGFA-225ENST00000523950 TSPAN8P19075 237 aa11.81□□□□□ -0.52
VEGFA-225ENST00000523950 HMOX2P30519 316 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms