RNA–Protein interactions for RNA: ENST00000522963.5

PVT1-215, Transcript of Pvt1 oncogene, humanhuman

TSL 4

Gene PVT1, Length 568 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-215ENST00000522963 KLHL18O94889 574 aa11.3□□□□□ -0.6
PVT1-215ENST00000522963 KLK3P07288 261 aaPredicted RBP11.3□□□□□ -0.6
PVT1-215ENST00000522963 PRR35P0CG20 571 aa11.3□□□□□ -0.6
PVT1-215ENST00000522963 IL1RNP18510 177 aa11.3□□□□□ -0.6
PVT1-215ENST00000522963 WT1P19544 449 aaPredicted RBP11.3□□□□□ -0.6
PVT1-215ENST00000522963 TCN2P20062 427 aa11.3□□□□□ -0.6
PVT1-215ENST00000522963 STAT5AP42229 794 aa11.3□□□□□ -0.6
PVT1-215ENST00000522963 RAE1P78406 368 aaKnown RBP11.3□□□□□ -0.6
PVT1-215ENST00000522963 BTN3A2P78410 334 aa11.3□□□□□ -0.6
PVT1-215ENST00000522963 TGM3Q08188 693 aa11.3□□□□□ -0.6
PVT1-215ENST00000522963 ABHD18Q0P651 414 aa11.3□□□□□ -0.6
PVT1-215ENST00000522963 KIAA0040Q15053 153 aa11.3□□□□□ -0.6
PVT1-215ENST00000522963 MUM1Q2TAK8 710 aa11.3□□□□□ -0.6
PVT1-215ENST00000522963 AP5B1Q2VPB7 878 aa11.3□□□□□ -0.6
PVT1-215ENST00000522963 FAM214AQ32MH5 1076 aa11.3□□□□□ -0.6
PVT1-215ENST00000522963 DEFB134Q4QY38 66 aa11.3□□□□□ -0.6
PVT1-215ENST00000522963 RFTN2Q52LD8 501 aaPredicted RBP11.3□□□□□ -0.6
PVT1-215ENST00000522963 C6orf136Q5SQH8 315 aa11.3□□□□□ -0.6
PVT1-215ENST00000522963 C1orf189Q5VU69 101 aa11.3□□□□□ -0.6
PVT1-215ENST00000522963 YOD1Q5VVQ6 348 aaPredicted RBP11.3□□□□□ -0.6
PVT1-215ENST00000522963 OR4C11Q6IEV9 310 aa11.3□□□□□ -0.6
PVT1-215ENST00000522963 TRIM40Q6P9F5 258 aa11.3□□□□□ -0.6
PVT1-215ENST00000522963 ZNF793Q6ZN11 406 aa11.3□□□□□ -0.6
PVT1-215ENST00000522963 LARP4Q71RC2 724 aaKnown RBP eCLIP11.3□□□□□ -0.6
PVT1-215ENST00000522963 GPR155Q7Z3F1 870 aa11.3□□□□□ -0.6
PVT1-215ENST00000522963 COMMD6Q7Z4G1 85 aa11.3□□□□□ -0.6
PVT1-215ENST00000522963 CPLX4Q7Z7G2 160 aa11.3□□□□□ -0.6
PVT1-215ENST00000522963 PDSS2Q86YH6 399 aa11.3□□□□□ -0.6
PVT1-215ENST00000522963 C1orf52Q8N6N3 182 aaKnown RBP11.3□□□□□ -0.6
PVT1-215ENST00000522963 SLC38A9Q8NBW4 561 aa11.3□□□□□ -0.6
PVT1-215ENST00000522963 SRFBP1Q8NEF9 429 aaKnown RBP11.3□□□□□ -0.6
PVT1-215ENST00000522963 ACTRT2Q8TDY3 377 aa11.3□□□□□ -0.6
PVT1-215ENST00000522963 CT55Q8WUE5 264 aa11.3□□□□□ -0.6
PVT1-215ENST00000522963 C11orf24Q96F05 449 aaPredicted RBP11.3□□□□□ -0.6
PVT1-215ENST00000522963 KCNC2Q96PR1 638 aa11.3□□□□□ -0.6
PVT1-215ENST00000522963 ELAC2Q9BQ52 826 aaKnown RBP11.3□□□□□ -0.6
PVT1-215ENST00000522963 SIKE1Q9BRV8 207 aa11.3□□□□□ -0.6
PVT1-215ENST00000522963 TBCDQ9BTW9 1192 aa11.3□□□□□ -0.6
PVT1-215ENST00000522963 NDC1Q9BTX1 674 aa11.3□□□□□ -0.6
PVT1-215ENST00000522963 NSRP1Q9H0G5 558 aaKnown RBP11.3□□□□□ -0.6
PVT1-215ENST00000522963 PRORYQ9H606 182 aa11.3□□□□□ -0.6
PVT1-215ENST00000522963 AKIRIN1Q9H9L7 192 aaPredicted RBP11.3□□□□□ -0.6
PVT1-215ENST00000522963 PRDM7Q9NQW5 492 aa11.3□□□□□ -0.6
PVT1-215ENST00000522963 AHSPQ9NZD4 102 aa11.3□□□□□ -0.6
PVT1-215ENST00000522963 KLHL14Q9P2G3 628 aa11.3□□□□□ -0.6
PVT1-215ENST00000522963 DHCR7Q9UBM7 475 aaKnown RBP11.3□□□□□ -0.6
PVT1-215ENST00000522963 NDOR1Q9UHB4 597 aa11.3□□□□□ -0.6
PVT1-215ENST00000522963 IL17BQ9UHF5 180 aa11.3□□□□□ -0.6
PVT1-215ENST00000522963 CROTQ9UKG9 612 aa11.3□□□□□ -0.6
PVT1-215ENST00000522963 PCDHB3Q9Y5E6 796 aa11.3□□□□□ -0.6
PVT1-215ENST00000522963 MRPS18BQ9Y676 258 aaKnown RBP11.3□□□□□ -0.6
PVT1-215ENST00000522963 KMT2BQ9UMN6 2715 aaPredicted RBP11.29□□□□□ -0.6
PVT1-215ENST00000522963 A0A0A6YYC8 382 aaPredicted RBP11.29□□□□□ -0.6
PVT1-215ENST00000522963 I3L1I5 382 aaPredicted RBP11.29□□□□□ -0.6
PVT1-215ENST00000522963 K7ENP7 123 aa11.29□□□□□ -0.6
PVT1-215ENST00000522963 DSCR3O14972 297 aa11.29□□□□□ -0.6
PVT1-215ENST00000522963 GALR3O60755 368 aaPredicted RBP11.29□□□□□ -0.6
PVT1-215ENST00000522963 DNAJB6O75190 326 aa11.29□□□□□ -0.6
PVT1-215ENST00000522963 VPS4BO75351 444 aa11.29□□□□□ -0.6
PVT1-215ENST00000522963 EEDO75530 441 aaKnown RBP11.29□□□□□ -0.6
PVT1-215ENST00000522963 SCELO95171 688 aa11.29□□□□□ -0.6
PVT1-215ENST00000522963 GBAP04062 536 aa11.29□□□□□ -0.6
PVT1-215ENST00000522963 KLK1P06870 262 aa11.29□□□□□ -0.6
PVT1-215ENST00000522963 PRKAR1AP10644 381 aa11.29□□□□□ -0.6
PVT1-215ENST00000522963 ALAS2P22557 587 aa11.29□□□□□ -0.6
PVT1-215ENST00000522963 ATP5A1P25705 553 aaKnown RBP11.29□□□□□ -0.6
PVT1-215ENST00000522963 TPP2P29144 1249 aaPredicted RBP11.29□□□□□ -0.6
PVT1-215ENST00000522963 SSR2P43308 183 aa11.29□□□□□ -0.6
PVT1-215ENST00000522963 ARFIP1P53367 373 aa11.29□□□□□ -0.6
PVT1-215ENST00000522963 ARSFP54793 590 aa11.29□□□□□ -0.6
PVT1-215ENST00000522963 RPL38P63173 70 aaKnown RBP11.29□□□□□ -0.6
PVT1-215ENST00000522963 ACSM2AQ08AH3 577 aa11.29□□□□□ -0.6
PVT1-215ENST00000522963 FAM53BQ14153 422 aa11.29□□□□□ -0.6
PVT1-215ENST00000522963 MAP7Q14244 749 aa11.29□□□□□ -0.6
PVT1-215ENST00000522963 HERC3Q15034 1050 aa11.29□□□□□ -0.6
PVT1-215ENST00000522963 LSM12Q3MHD2 195 aaKnown RBP11.29□□□□□ -0.6
PVT1-215ENST00000522963 ATP6AP1LQ52LC2 224 aa11.29□□□□□ -0.6
PVT1-215ENST00000522963 SPIN4Q56A73 249 aa11.29□□□□□ -0.6
PVT1-215ENST00000522963 ACSM2BQ68CK6 577 aa11.29□□□□□ -0.6
PVT1-215ENST00000522963 NXNQ6DKJ4 435 aa11.29□□□□□ -0.6
PVT1-215ENST00000522963 RHBDD2Q6NTF9 364 aa11.29□□□□□ -0.6
PVT1-215ENST00000522963 INO80CQ6PI98 192 aaPredicted RBP11.29□□□□□ -0.6
PVT1-215ENST00000522963 TTLL10Q6ZVT0 673 aa11.29□□□□□ -0.6
PVT1-215ENST00000522963 ACAD11Q709F0 780 aa11.29□□□□□ -0.6
PVT1-215ENST00000522963 SPATA21Q7Z572 469 aa11.29□□□□□ -0.6
PVT1-215ENST00000522963 METTL27Q8N6F8 245 aaPredicted RBP11.29□□□□□ -0.6
PVT1-215ENST00000522963 OR9A4Q8NGU2 314 aa11.29□□□□□ -0.6
PVT1-215ENST00000522963 C10orf82Q8WW14 230 aa11.29□□□□□ -0.6
PVT1-215ENST00000522963 FCRL1Q96LA6 429 aa11.29□□□□□ -0.6
PVT1-215ENST00000522963 TMEM120AQ9BXJ8 343 aa11.29□□□□□ -0.6
PVT1-215ENST00000522963 DDX31Q9H8H2 851 aaKnown RBP11.29□□□□□ -0.6
PVT1-215ENST00000522963 ANKHQ9HCJ1 492 aa11.29□□□□□ -0.6
PVT1-215ENST00000522963 TXLNGQ9NUQ3 528 aa11.29□□□□□ -0.6
PVT1-215ENST00000522963 SIRT5Q9NXA8 310 aa11.29□□□□□ -0.6
PVT1-215ENST00000522963 SRPK3Q9UPE1 567 aa11.29□□□□□ -0.6
PVT1-215ENST00000522963 NAALAD2Q9Y3Q0 740 aa11.29□□□□□ -0.6
PVT1-215ENST00000522963 FER1L5A0AVI2 2057 aa11.28□□□□□ -0.6
PVT1-215ENST00000522963 A0A0A6YYD5 115 aa11.28□□□□□ -0.6
PVT1-215ENST00000522963 A0A1B0GX78 115 aa11.28□□□□□ -0.6
PVT1-215ENST00000522963 ZNF860A6NHJ4 632 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms