RNA–Protein interactions for RNA: ENST00000522468.1

HMBOX1-209, Transcript of homeobox containing 1, humanhuman

TSL 3

Gene HMBOX1, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-209ENST00000522468 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.14□□□□□ -0.31
HMBOX1-209ENST00000522468 CYP4X1Q8N118 509 aa13.14□□□□□ -0.31
HMBOX1-209ENST00000522468 GHDCQ8N2G8 530 aa13.14□□□□□ -0.31
HMBOX1-209ENST00000522468 NKAPQ8N5F7 415 aaKnown RBP13.14□□□□□ -0.31
HMBOX1-209ENST00000522468 FAM98AQ8NCA5 519 aaKnown RBP13.14□□□□□ -0.31
HMBOX1-209ENST00000522468 PHF10Q8WUB8 498 aaKnown RBP13.14□□□□□ -0.31
HMBOX1-209ENST00000522468 RHBDF1Q96CC6 855 aa13.14□□□□□ -0.31
HMBOX1-209ENST00000522468 MMACHCQ9Y4U1 282 aa13.14□□□□□ -0.31
HMBOX1-209ENST00000522468 OARD1Q9Y530 152 aa13.14□□□□□ -0.31
HMBOX1-209ENST00000522468 MAP1AP78559 2803 aaPredicted RBP13.14□□□□□ -0.31
HMBOX1-209ENST00000522468 DNAJC13O75165 2243 aa13.13□□□□□ -0.31
HMBOX1-209ENST00000522468 MTORP42345 2549 aa13.13□□□□□ -0.31
HMBOX1-209ENST00000522468 EML6Q6ZMW3 1958 aa13.13□□□□□ -0.31
HMBOX1-209ENST00000522468 FAM95CA0A1B0GW59 222 aa13.13□□□□□ -0.31
HMBOX1-209ENST00000522468 LRIT2A6NDA9 550 aa13.13□□□□□ -0.31
HMBOX1-209ENST00000522468 PRAMEF4O60810 478 aa13.13□□□□□ -0.31
HMBOX1-209ENST00000522468 CLDN14O95500 239 aa13.13□□□□□ -0.31
HMBOX1-209ENST00000522468 ESRRAP11474 423 aaPredicted RBP13.13□□□□□ -0.31
HMBOX1-209ENST00000522468 ZNF24P17028 368 aa13.13□□□□□ -0.31
HMBOX1-209ENST00000522468 GDF5P43026 501 aa13.13□□□□□ -0.31
HMBOX1-209ENST00000522468 HNRNPFP52597 415 aaKnown RBP13.13□□□□□ -0.31
HMBOX1-209ENST00000522468 SMSP52788 366 aa13.13□□□□□ -0.31
HMBOX1-209ENST00000522468 MGAT5Q09328 741 aa13.13□□□□□ -0.31
HMBOX1-209ENST00000522468 RUNX2Q13950 521 aa13.13□□□□□ -0.31
HMBOX1-209ENST00000522468 TRADDQ15628 312 aa13.13□□□□□ -0.31
HMBOX1-209ENST00000522468 TSNQ15631 228 aaKnown RBP13.13□□□□□ -0.31
HMBOX1-209ENST00000522468 ERCC6LQ2NKX8 1250 aa13.13□□□□□ -0.31
HMBOX1-209ENST00000522468 C18orf21Q32NC0 220 aaPredicted RBP13.13□□□□□ -0.31
HMBOX1-209ENST00000522468 ADPRMQ3LIE5 342 aa13.13□□□□□ -0.31
HMBOX1-209ENST00000522468 TOR1AIP1Q5JTV8 583 aa13.13□□□□□ -0.31
HMBOX1-209ENST00000522468 PRAMEF9Q5VWM5 478 aa13.13□□□□□ -0.31
HMBOX1-209ENST00000522468 VN1R5Q7Z5H4 357 aa13.13□□□□□ -0.31
HMBOX1-209ENST00000522468 ANKMY2Q8IV38 441 aa13.13□□□□□ -0.31
HMBOX1-209ENST00000522468 POGLUT1Q8NBL1 392 aa13.13□□□□□ -0.31
HMBOX1-209ENST00000522468 TMEM52Q8NDY8 209 aa13.13□□□□□ -0.31
HMBOX1-209ENST00000522468 B3GNT7Q8NFL0 401 aa13.13□□□□□ -0.31
HMBOX1-209ENST00000522468 AGAP11Q8TF27 550 aa13.13□□□□□ -0.31
HMBOX1-209ENST00000522468 IFT81Q8WYA0 676 aa13.13□□□□□ -0.31
HMBOX1-209ENST00000522468 GAL3ST3Q96A11 431 aa13.13□□□□□ -0.31
HMBOX1-209ENST00000522468 MS4A6EQ96DS6 147 aa13.13□□□□□ -0.31
HMBOX1-209ENST00000522468 LURAP1Q96LR2 239 aa13.13□□□□□ -0.31
HMBOX1-209ENST00000522468 QRFPRQ96P65 431 aa13.13□□□□□ -0.31
HMBOX1-209ENST00000522468 GRHL1Q9NZI5 618 aa13.13□□□□□ -0.31
HMBOX1-209ENST00000522468 HCFC1P51610 2035 aa13.12□□□□□ -0.31
HMBOX1-209ENST00000522468 TMEM200CA6NKL6 621 aa13.12□□□□□ -0.31
HMBOX1-209ENST00000522468 A8MUA0 341 aa13.12□□□□□ -0.31
HMBOX1-209ENST00000522468 E9PLN8 166 aa13.12□□□□□ -0.31
HMBOX1-209ENST00000522468 PSMD12O00232 456 aaPredicted RBP13.12□□□□□ -0.31
HMBOX1-209ENST00000522468 SNRPB2P08579 225 aaKnown RBP13.12□□□□□ -0.31
HMBOX1-209ENST00000522468 C1GALT1C1LP0DN25 315 aa13.12□□□□□ -0.31
HMBOX1-209ENST00000522468 COX6B1P14854 86 aa13.12□□□□□ -0.31
HMBOX1-209ENST00000522468 GNAZP19086 355 aa13.12□□□□□ -0.31
HMBOX1-209ENST00000522468 PTGER1P34995 402 aa13.12□□□□□ -0.31
HMBOX1-209ENST00000522468 KIR3DL1P43629 444 aa13.12□□□□□ -0.31
HMBOX1-209ENST00000522468 PLTPP55058 493 aa13.12□□□□□ -0.31
HMBOX1-209ENST00000522468 ARL4CP56559 192 aa13.12□□□□□ -0.31
HMBOX1-209ENST00000522468 CAV1Q03135 178 aa13.12□□□□□ -0.31
HMBOX1-209ENST00000522468 RBBP5Q15291 538 aaKnown RBP13.12□□□□□ -0.31
HMBOX1-209ENST00000522468 TMIGD1Q6UXZ0 262 aa13.12□□□□□ -0.31
HMBOX1-209ENST00000522468 ADAMTSL2Q86TH1 951 aa13.12□□□□□ -0.31
HMBOX1-209ENST00000522468 FBXO36Q8NEA4 188 aa13.12□□□□□ -0.31
HMBOX1-209ENST00000522468 C16orf52Q8NHV5 167 aa13.12□□□□□ -0.31
HMBOX1-209ENST00000522468 MTFMTQ96DP5 389 aaKnown RBP13.12□□□□□ -0.31
HMBOX1-209ENST00000522468 SEC16BQ96JE7 1060 aa13.12□□□□□ -0.31
HMBOX1-209ENST00000522468 TREX2Q9BQ50 279 aaPredicted RBP13.12□□□□□ -0.31
HMBOX1-209ENST00000522468 VKORC1Q9BQB6 163 aa13.12□□□□□ -0.31
HMBOX1-209ENST00000522468 NPLQ9BXD5 320 aaPredicted RBP13.12□□□□□ -0.31
HMBOX1-209ENST00000522468 DEFB126Q9BYW3 111 aa13.12□□□□□ -0.31
HMBOX1-209ENST00000522468 RHBGQ9H310 441 aa13.12□□□□□ -0.31
HMBOX1-209ENST00000522468 RHOJQ9H4E5 214 aa13.12□□□□□ -0.31
HMBOX1-209ENST00000522468 NT5DC2Q9H857 520 aa13.12□□□□□ -0.31
HMBOX1-209ENST00000522468 ANKZF1Q9H8Y5 726 aa13.12□□□□□ -0.31
HMBOX1-209ENST00000522468 POPDC3Q9HBV1 291 aa13.12□□□□□ -0.31
HMBOX1-209ENST00000522468 SMYD2Q9NRG4 433 aa13.12□□□□□ -0.31
HMBOX1-209ENST00000522468 PLSCR2Q9NRY7 297 aa13.12□□□□□ -0.31
HMBOX1-209ENST00000522468 SPG11Q96JI7 2443 aa13.12□□□□□ -0.31
HMBOX1-209ENST00000522468 PHF3Q92576 2039 aaKnown RBP13.12□□□□□ -0.31
HMBOX1-209ENST00000522468 C2CD3Q4AC94 2353 aa13.12□□□□□ -0.31
HMBOX1-209ENST00000522468 TRBV11-1A0A0K0K1C0 115 aa13.11□□□□□ -0.31
HMBOX1-209ENST00000522468 TAPBPO15533 448 aa13.11□□□□□ -0.31
HMBOX1-209ENST00000522468 PRKNO60260 465 aaPredicted RBP13.11□□□□□ -0.31
HMBOX1-209ENST00000522468 CLEC3AO75596 197 aa13.11□□□□□ -0.31
HMBOX1-209ENST00000522468 MYO1DO94832 1006 aa13.11□□□□□ -0.31
HMBOX1-209ENST00000522468 WDR47O94967 919 aa13.11□□□□□ -0.31
HMBOX1-209ENST00000522468 ABOP16442 354 aa13.11□□□□□ -0.31
HMBOX1-209ENST00000522468 TFEBP19484 476 aa13.11□□□□□ -0.31
HMBOX1-209ENST00000522468 SAT1P21673 171 aa13.11□□□□□ -0.31
HMBOX1-209ENST00000522468 GSTM2P28161 218 aa13.11□□□□□ -0.31
HMBOX1-209ENST00000522468 PPP2R1BP30154 601 aa13.11□□□□□ -0.31
HMBOX1-209ENST00000522468 GGT5P36269 586 aa13.11□□□□□ -0.31
HMBOX1-209ENST00000522468 MEOX1P50221 254 aa13.11□□□□□ -0.31
HMBOX1-209ENST00000522468 CLCN2P51788 898 aa13.11□□□□□ -0.31
HMBOX1-209ENST00000522468 HSD17B7P56937 341 aa13.11□□□□□ -0.31
HMBOX1-209ENST00000522468 STXBP1P61764 594 aaKnown RBP13.11□□□□□ -0.31
HMBOX1-209ENST00000522468 BTN3A2P78410 334 aa13.11□□□□□ -0.31
HMBOX1-209ENST00000522468 SLBPQ14493 270 aaKnown RBP eCLIP13.11□□□□□ -0.31
HMBOX1-209ENST00000522468 TGFBIQ15582 683 aa13.11□□□□□ -0.31
HMBOX1-209ENST00000522468 CMPK2Q5EBM0 449 aa13.11□□□□□ -0.31
HMBOX1-209ENST00000522468 ADNP2Q6IQ32 1131 aa13.11□□□□□ -0.31
HMBOX1-209ENST00000522468 MDGA2Q7Z553 956 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms