RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 PAOXQ6QHF9 649 aa12.4□□□□□ -0.42
CPNE3-205ENST00000522240 GK5Q6ZS86 529 aa12.4□□□□□ -0.42
CPNE3-205ENST00000522240 CAMKMTQ7Z624 323 aa12.4□□□□□ -0.42
CPNE3-205ENST00000522240 FUNDC1Q8IVP5 155 aa12.4□□□□□ -0.42
CPNE3-205ENST00000522240 TTC29Q8NA56 475 aaPredicted RBP12.4□□□□□ -0.42
CPNE3-205ENST00000522240 OR9I1Q8NGQ6 314 aa12.4□□□□□ -0.42
CPNE3-205ENST00000522240 OR8K5Q8NH50 307 aa12.4□□□□□ -0.42
CPNE3-205ENST00000522240 ZCCHC10Q8TBK6 192 aa12.4□□□□□ -0.42
CPNE3-205ENST00000522240 C16orf78Q8WTQ4 265 aa12.4□□□□□ -0.42
CPNE3-205ENST00000522240 MTERF3Q96E29 417 aa12.4□□□□□ -0.42
CPNE3-205ENST00000522240 ZNF764Q96H86 408 aaPredicted RBP12.4□□□□□ -0.42
CPNE3-205ENST00000522240 SERINC2Q96SA4 455 aa12.4□□□□□ -0.42
CPNE3-205ENST00000522240 MACROD1Q9BQ69 325 aa12.4□□□□□ -0.42
CPNE3-205ENST00000522240 SLC25A23Q9BV35 468 aa12.4□□□□□ -0.42
CPNE3-205ENST00000522240 SORBS1Q9BX66 1292 aaKnown RBP12.4□□□□□ -0.42
CPNE3-205ENST00000522240 CLMPQ9H6B4 373 aa12.4□□□□□ -0.42
CPNE3-205ENST00000522240 PRDM7Q9NQW5 492 aa12.4□□□□□ -0.42
CPNE3-205ENST00000522240 TXLNGQ9NUQ3 528 aa12.4□□□□□ -0.42
CPNE3-205ENST00000522240 ARL8BQ9NVJ2 186 aa12.4□□□□□ -0.42
CPNE3-205ENST00000522240 SIDT1Q9NXL6 827 aaKnown RBP12.4□□□□□ -0.42
CPNE3-205ENST00000522240 CCDC167Q9P0B6 97 aa12.4□□□□□ -0.42
CPNE3-205ENST00000522240 UNC13CQ8NB66 2214 aa12.39□□□□□ -0.43
CPNE3-205ENST00000522240 A8MU76 341 aa12.39□□□□□ -0.43
CPNE3-205ENST00000522240 TMEM150CB9EJG8 249 aa12.39□□□□□ -0.43
CPNE3-205ENST00000522240 SCAMP2O15127 329 aaKnown RBP12.39□□□□□ -0.43
CPNE3-205ENST00000522240 TMPRSS11DO60235 418 aa12.39□□□□□ -0.43
CPNE3-205ENST00000522240 TBX19O60806 448 aa12.39□□□□□ -0.43
CPNE3-205ENST00000522240 GUCY1B2O75343 617 aa12.39□□□□□ -0.43
CPNE3-205ENST00000522240 ATP5HO75947 161 aa12.39□□□□□ -0.43
CPNE3-205ENST00000522240 UNC5CO95185 931 aa12.39□□□□□ -0.43
CPNE3-205ENST00000522240 SNRPB2P08579 225 aaKnown RBP12.39□□□□□ -0.43
CPNE3-205ENST00000522240 CDK4P11802 303 aa12.39□□□□□ -0.43
CPNE3-205ENST00000522240 FOLR1P15328 257 aa12.39□□□□□ -0.43
CPNE3-205ENST00000522240 DDX5P17844 614 aaKnown RBP12.39□□□□□ -0.43
CPNE3-205ENST00000522240 IL12AP29459 219 aa12.39□□□□□ -0.43
CPNE3-205ENST00000522240 ZFP36L2P47974 494 aaKnown RBP12.39□□□□□ -0.43
CPNE3-205ENST00000522240 MNAT1P51948 309 aa12.39□□□□□ -0.43
CPNE3-205ENST00000522240 POLR2JP52435 117 aaKnown RBP12.39□□□□□ -0.43
CPNE3-205ENST00000522240 PDX1P52945 283 aa12.39□□□□□ -0.43
CPNE3-205ENST00000522240 ITGA1P56199 1179 aa12.39□□□□□ -0.43
CPNE3-205ENST00000522240 NME5P56597 212 aa12.39□□□□□ -0.43
CPNE3-205ENST00000522240 KCNK10P57789 538 aa12.39□□□□□ -0.43
CPNE3-205ENST00000522240 RAB8AP61006 207 aa12.39□□□□□ -0.43
CPNE3-205ENST00000522240 LSM11P83369 360 aaKnown RBP eCLIP12.39□□□□□ -0.43
CPNE3-205ENST00000522240 KLC1Q07866 573 aa12.39□□□□□ -0.43
CPNE3-205ENST00000522240 PDE7AQ13946 482 aa12.39□□□□□ -0.43
CPNE3-205ENST00000522240 CYLC2Q14093 348 aaPredicted RBP12.39□□□□□ -0.43
CPNE3-205ENST00000522240 FAM53BQ14153 422 aa12.39□□□□□ -0.43
CPNE3-205ENST00000522240 KCNAB1Q14722 419 aa12.39□□□□□ -0.43
CPNE3-205ENST00000522240 MUM1Q2TAK8 710 aa12.39□□□□□ -0.43
CPNE3-205ENST00000522240 LACTB2Q53H82 288 aaPredicted RBP12.39□□□□□ -0.43
CPNE3-205ENST00000522240 COQ5Q5HYK3 327 aa12.39□□□□□ -0.43
CPNE3-205ENST00000522240 PHF19Q5T6S3 580 aa12.39□□□□□ -0.43
CPNE3-205ENST00000522240 FAM71E1Q6IPT2 247 aa12.39□□□□□ -0.43
CPNE3-205ENST00000522240 TLDC1Q6P9B6 456 aa12.39□□□□□ -0.43
CPNE3-205ENST00000522240 BLOC1S3Q6QNY0 202 aa12.39□□□□□ -0.43
CPNE3-205ENST00000522240 RBM44Q6ZP01 1051 aaKnown RBP12.39□□□□□ -0.43
CPNE3-205ENST00000522240 MSANTD1Q6ZTZ1 278 aa12.39□□□□□ -0.43
CPNE3-205ENST00000522240 R3HCC1LQ7Z5L2 792 aaKnown RBP12.39□□□□□ -0.43
CPNE3-205ENST00000522240 RETREG3Q86VR2 466 aa12.39□□□□□ -0.43
CPNE3-205ENST00000522240 SNX32Q86XE0 403 aa12.39□□□□□ -0.43
CPNE3-205ENST00000522240 RIMKLAQ8IXN7 391 aa12.39□□□□□ -0.43
CPNE3-205ENST00000522240 TMEM132CQ8N3T6 1108 aa12.39□□□□□ -0.43
CPNE3-205ENST00000522240 ACOT4Q8N9L9 421 aa12.39□□□□□ -0.43
CPNE3-205ENST00000522240 CLHC1Q8NHS4 586 aa12.39□□□□□ -0.43
CPNE3-205ENST00000522240 ZNF501Q96CX3 271 aaPredicted RBP12.39□□□□□ -0.43
CPNE3-205ENST00000522240 NSL1Q96IY1 281 aa12.39□□□□□ -0.43
CPNE3-205ENST00000522240 TEX37Q96LM6 180 aa12.39□□□□□ -0.43
CPNE3-205ENST00000522240 C10orf90Q96M02 699 aa12.39□□□□□ -0.43
CPNE3-205ENST00000522240 CNTNAP3BQ96NU0 1288 aa12.39□□□□□ -0.43
CPNE3-205ENST00000522240 NPLQ9BXD5 320 aaPredicted RBP12.39□□□□□ -0.43
CPNE3-205ENST00000522240 CNTNAP3Q9BZ76 1288 aa12.39□□□□□ -0.43
CPNE3-205ENST00000522240 CLK4Q9HAZ1 481 aaKnown RBP12.39□□□□□ -0.43
CPNE3-205ENST00000522240 FGF21Q9NSA1 209 aa12.39□□□□□ -0.43
CPNE3-205ENST00000522240 BAIAP2L1Q9UHR4 511 aa12.39□□□□□ -0.43
CPNE3-205ENST00000522240 PHF11Q9UIL8 331 aa12.39□□□□□ -0.43
CPNE3-205ENST00000522240 A0A0G2JN53 185 aa12.38□□□□□ -0.43
CPNE3-205ENST00000522240 TMX2-CTNND1H3BSU7 103 aa12.38□□□□□ -0.43
CPNE3-205ENST00000522240 NR5A2O00482 541 aa12.38□□□□□ -0.43
CPNE3-205ENST00000522240 CFLARO15519 480 aa12.38□□□□□ -0.43
CPNE3-205ENST00000522240 B3GALT2O43825 422 aa12.38□□□□□ -0.43
CPNE3-205ENST00000522240 GALR3O60755 368 aaPredicted RBP12.38□□□□□ -0.43
CPNE3-205ENST00000522240 OR2B3O76000 313 aa12.38□□□□□ -0.43
CPNE3-205ENST00000522240 KLHL18O94889 574 aa12.38□□□□□ -0.43
CPNE3-205ENST00000522240 NSA2O95478 260 aaKnown RBP12.38□□□□□ -0.43
CPNE3-205ENST00000522240 CBX6O95503 412 aa12.38□□□□□ -0.43
CPNE3-205ENST00000522240 GBAP04062 536 aa12.38□□□□□ -0.43
CPNE3-205ENST00000522240 IL6P05231 212 aa12.38□□□□□ -0.43
CPNE3-205ENST00000522240 FAM58BPP0C7Q3 252 aa12.38□□□□□ -0.43
CPNE3-205ENST00000522240 T-ENOLP0DO92 83 aa12.38□□□□□ -0.43
CPNE3-205ENST00000522240 ESRRAP11474 423 aaPredicted RBP12.38□□□□□ -0.43
CPNE3-205ENST00000522240 CAPN3P20807 821 aa12.38□□□□□ -0.43
CPNE3-205ENST00000522240 CERS1P27544 350 aa12.38□□□□□ -0.43
CPNE3-205ENST00000522240 CSTF2P33240 577 aaKnown RBP eCLIP12.38□□□□□ -0.43
CPNE3-205ENST00000522240 TAS2R50P59544 299 aa12.38□□□□□ -0.43
CPNE3-205ENST00000522240 BTN3A2P78410 334 aa12.38□□□□□ -0.43
CPNE3-205ENST00000522240 STX5Q13190 355 aa12.38□□□□□ -0.43
CPNE3-205ENST00000522240 SLC9A5Q14940 896 aa12.38□□□□□ -0.43
CPNE3-205ENST00000522240 HEPACAMQ14CZ8 416 aa12.38□□□□□ -0.43
CPNE3-205ENST00000522240 GPR19Q15760 415 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms