RNA–Protein interactions for RNA: ENST00000521387.1

CTNNA1-227, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 871 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-227ENST00000521387 PRR35P0CG20 571 aa6.88□□□□□ -1.31
CTNNA1-227ENST00000521387 STMN1P16949 149 aa6.88□□□□□ -1.31
CTNNA1-227ENST00000521387 ZNF8P17098 575 aaPredicted RBP6.88□□□□□ -1.31
CTNNA1-227ENST00000521387 CALB2P22676 271 aa6.88□□□□□ -1.31
CTNNA1-227ENST00000521387 CRABP2P29373 138 aa6.88□□□□□ -1.31
CTNNA1-227ENST00000521387 SERPINA4P29622 427 aa6.88□□□□□ -1.31
CTNNA1-227ENST00000521387 PTGER1P34995 402 aa6.88□□□□□ -1.31
CTNNA1-227ENST00000521387 PRKAA2P54646 552 aa6.88□□□□□ -1.31
CTNNA1-227ENST00000521387 POU4F1Q01851 419 aa6.88□□□□□ -1.31
CTNNA1-227ENST00000521387 ACVR1Q04771 509 aa6.88□□□□□ -1.31
CTNNA1-227ENST00000521387 GALNT3Q14435 633 aa6.88□□□□□ -1.31
CTNNA1-227ENST00000521387 SEMA3AQ14563 771 aa6.88□□□□□ -1.31
CTNNA1-227ENST00000521387 NKAIN1Q4KMZ8 207 aa6.88□□□□□ -1.31
CTNNA1-227ENST00000521387 SLC9B1Q4ZJI4 515 aa6.88□□□□□ -1.31
CTNNA1-227ENST00000521387 ZNF766Q5HY98 468 aa6.88□□□□□ -1.31
CTNNA1-227ENST00000521387 WASHC2DQ5SRD0 308 aa6.88□□□□□ -1.31
CTNNA1-227ENST00000521387 HECTD2Q5U5R9 776 aa6.88□□□□□ -1.31
CTNNA1-227ENST00000521387 LIPMQ5VYY2 423 aa6.88□□□□□ -1.31
CTNNA1-227ENST00000521387 ALG1LQ6GMV1 187 aa6.88□□□□□ -1.31
CTNNA1-227ENST00000521387 RHBDD2Q6NTF9 364 aa6.88□□□□□ -1.31
CTNNA1-227ENST00000521387 SHISA6Q6ZSJ9 500 aa6.88□□□□□ -1.31
CTNNA1-227ENST00000521387 KIAA0408Q6ZU52 694 aa6.88□□□□□ -1.31
CTNNA1-227ENST00000521387 PHYKPLQ8IUZ5 450 aa6.88□□□□□ -1.31
CTNNA1-227ENST00000521387 RBM12BQ8IXT5 1001 aaKnown RBP6.88□□□□□ -1.31
CTNNA1-227ENST00000521387 LGI4Q8N135 537 aa6.88□□□□□ -1.31
CTNNA1-227ENST00000521387 EID3Q8N140 333 aa6.88□□□□□ -1.31
CTNNA1-227ENST00000521387 SPATA6LQ8N4H0 392 aa6.88□□□□□ -1.31
CTNNA1-227ENST00000521387 ZNF781Q8N8C0 355 aa6.88□□□□□ -1.31
CTNNA1-227ENST00000521387 OR6P1Q8NGX9 317 aa6.88□□□□□ -1.31
CTNNA1-227ENST00000521387 FBXO27Q8NI29 283 aa6.88□□□□□ -1.31
CTNNA1-227ENST00000521387 RDH11Q8TC12 318 aa6.88□□□□□ -1.31
CTNNA1-227ENST00000521387 CALML6Q8TD86 181 aa6.88□□□□□ -1.31
CTNNA1-227ENST00000521387 HEXDCQ8WVB3 486 aa6.88□□□□□ -1.31
CTNNA1-227ENST00000521387 DNAJC1Q96KC8 554 aaKnown RBP6.88□□□□□ -1.31
CTNNA1-227ENST00000521387 TSNARE1Q96NA8 513 aa6.88□□□□□ -1.31
CTNNA1-227ENST00000521387 TRIB3Q96RU7 358 aa6.88□□□□□ -1.31
CTNNA1-227ENST00000521387 NDNQ99608 321 aa6.88□□□□□ -1.31
CTNNA1-227ENST00000521387 C17orf62Q9BQA9 187 aa6.88□□□□□ -1.31
CTNNA1-227ENST00000521387 MGME1Q9BQP7 344 aa6.88□□□□□ -1.31
CTNNA1-227ENST00000521387 POLR1EQ9GZS1 481 aaKnown RBP6.88□□□□□ -1.31
CTNNA1-227ENST00000521387 DRC3Q9H069 523 aa6.88□□□□□ -1.31
CTNNA1-227ENST00000521387 OSGEPL1Q9H4B0 414 aa6.88□□□□□ -1.31
CTNNA1-227ENST00000521387 ATP13A3Q9H7F0 1226 aa6.88□□□□□ -1.31
CTNNA1-227ENST00000521387 YAE1D1Q9NRH1 226 aa6.88□□□□□ -1.31
CTNNA1-227ENST00000521387 HRASLS2Q9NWW9 162 aa6.88□□□□□ -1.31
CTNNA1-227ENST00000521387 SOHLH2Q9NX45 425 aa6.88□□□□□ -1.31
CTNNA1-227ENST00000521387 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.88□□□□□ -1.31
CTNNA1-227ENST00000521387 ATXN10Q9UBB4 475 aa6.88□□□□□ -1.31
CTNNA1-227ENST00000521387 UBA2Q9UBT2 640 aaPredicted RBP6.88□□□□□ -1.31
CTNNA1-227ENST00000521387 NKX1-2Q9UD57 310 aaPredicted RBP6.88□□□□□ -1.31
CTNNA1-227ENST00000521387 TAGLN3Q9UI15 199 aa6.88□□□□□ -1.31
CTNNA1-227ENST00000521387 MID2Q9UJV3 735 aa6.88□□□□□ -1.31
CTNNA1-227ENST00000521387 MKL2Q9ULH7 1088 aa6.88□□□□□ -1.31
CTNNA1-227ENST00000521387 SPO11Q9Y5K1 396 aa6.88□□□□□ -1.31
CTNNA1-227ENST00000521387 VWFP04275 2813 aa6.88□□□□□ -1.31
CTNNA1-227ENST00000521387 PDZK1P1A8MUH7 402 aa6.87□□□□□ -1.31
CTNNA1-227ENST00000521387 FADS2P1A8MWK0 482 aa6.87□□□□□ -1.31
CTNNA1-227ENST00000521387 GYG2O15488 501 aa6.87□□□□□ -1.31
CTNNA1-227ENST00000521387 NDST3O95803 873 aa6.87□□□□□ -1.31
CTNNA1-227ENST00000521387 GOT2P00505 430 aaKnown RBP6.87□□□□□ -1.31
CTNNA1-227ENST00000521387 HPP00738 406 aa6.87□□□□□ -1.31
CTNNA1-227ENST00000521387 PRLP01236 227 aa6.87□□□□□ -1.31
CTNNA1-227ENST00000521387 EPOP01588 193 aa6.87□□□□□ -1.31
CTNNA1-227ENST00000521387 HRGP04196 525 aa6.87□□□□□ -1.31
CTNNA1-227ENST00000521387 CD63P08962 238 aa6.87□□□□□ -1.31
CTNNA1-227ENST00000521387 HBQ1P09105 142 aa6.87□□□□□ -1.31
CTNNA1-227ENST00000521387 ST6GAL1P15907 406 aa6.87□□□□□ -1.31
CTNNA1-227ENST00000521387 HLA-DPA1P20036 260 aa6.87□□□□□ -1.31
CTNNA1-227ENST00000521387 CCND1P24385 295 aa6.87□□□□□ -1.31
CTNNA1-227ENST00000521387 PREPP48147 710 aa6.87□□□□□ -1.31
CTNNA1-227ENST00000521387 NR0B1P51843 470 aaKnown RBP6.87□□□□□ -1.31
CTNNA1-227ENST00000521387 NAGLUP54802 743 aa6.87□□□□□ -1.31
CTNNA1-227ENST00000521387 CDKN2DP55273 166 aa6.87□□□□□ -1.31
CTNNA1-227ENST00000521387 POLR2LP62875 67 aaKnown RBP6.87□□□□□ -1.31
CTNNA1-227ENST00000521387 TIAL1Q01085 375 aaKnown RBP eCLIP6.87□□□□□ -1.31
CTNNA1-227ENST00000521387 BCL2L1Q07817 233 aa6.87□□□□□ -1.31
CTNNA1-227ENST00000521387 RCN2Q14257 317 aa6.87□□□□□ -1.31
CTNNA1-227ENST00000521387 CSHL1Q14406 222 aa6.87□□□□□ -1.31
CTNNA1-227ENST00000521387 SLC14A2Q15849 920 aa6.87□□□□□ -1.31
CTNNA1-227ENST00000521387 NKG7Q16617 165 aa6.87□□□□□ -1.31
CTNNA1-227ENST00000521387 FAM174BQ3ZCQ3 159 aa6.87□□□□□ -1.31
CTNNA1-227ENST00000521387 ARL13AQ5H913 290 aaPredicted RBP6.87□□□□□ -1.31
CTNNA1-227ENST00000521387 TECRLQ5HYJ1 363 aa6.87□□□□□ -1.31
CTNNA1-227ENST00000521387 CATSPEREQ5SY80 951 aa6.87□□□□□ -1.31
CTNNA1-227ENST00000521387 WLSQ5T9L3 541 aa6.87□□□□□ -1.31
CTNNA1-227ENST00000521387 ZNF549Q6P9A3 640 aa6.87□□□□□ -1.31
CTNNA1-227ENST00000521387 EPGNQ6UW88 154 aa6.87□□□□□ -1.31
CTNNA1-227ENST00000521387 WASH2PQ6VEQ5 465 aa6.87□□□□□ -1.31
CTNNA1-227ENST00000521387 COX15Q7KZN9 410 aa6.87□□□□□ -1.31
CTNNA1-227ENST00000521387 GALNT7Q86SF2 657 aa6.87□□□□□ -1.31
CTNNA1-227ENST00000521387 LCA5Q86VQ0 697 aa6.87□□□□□ -1.31
CTNNA1-227ENST00000521387 CILP2Q8IUL8 1156 aa6.87□□□□□ -1.31
CTNNA1-227ENST00000521387 TEX9Q8N6V9 391 aa6.87□□□□□ -1.31
CTNNA1-227ENST00000521387 OR13C4Q8NGS5 318 aa6.87□□□□□ -1.31
CTNNA1-227ENST00000521387 BRSK1Q8TDC3 778 aa6.87□□□□□ -1.31
CTNNA1-227ENST00000521387 BLOC1S5Q8TDH9 187 aa6.87□□□□□ -1.31
CTNNA1-227ENST00000521387 ANKRD49Q8WVL7 239 aa6.87□□□□□ -1.31
CTNNA1-227ENST00000521387 PERPQ96FX8 193 aa6.87□□□□□ -1.31
CTNNA1-227ENST00000521387 SIKE1Q9BRV8 207 aa6.87□□□□□ -1.31
CTNNA1-227ENST00000521387 RIOK2Q9BVS4 552 aaKnown RBP6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms