RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 RTCAO00442 366 aaKnown RBP19.4■□□□□ 0.7
TRIM35-203ENST00000521253 CLDN9O95484 217 aa19.4■□□□□ 0.7
TRIM35-203ENST00000521253 RPS17P08708 135 aaKnown RBP19.4■□□□□ 0.7
TRIM35-203ENST00000521253 ITGAMP11215 1152 aa19.4■□□□□ 0.7
TRIM35-203ENST00000521253 ICAM2P13598 275 aa19.4■□□□□ 0.7
TRIM35-203ENST00000521253 MAOAP21397 527 aa19.4■□□□□ 0.7
TRIM35-203ENST00000521253 ARL1P40616 181 aaPredicted RBP19.4■□□□□ 0.7
TRIM35-203ENST00000521253 CCNG1P51959 295 aa19.4■□□□□ 0.7
TRIM35-203ENST00000521253 MLLT10P55197 1068 aa19.4■□□□□ 0.7
TRIM35-203ENST00000521253 RAB38P57729 211 aa19.4■□□□□ 0.7
TRIM35-203ENST00000521253 OR4D2P58180 307 aa19.4■□□□□ 0.7
TRIM35-203ENST00000521253 DEPDC1Q5TB30 811 aa19.4■□□□□ 0.7
TRIM35-203ENST00000521253 KHDRBS2Q5VWX1 349 aaKnown RBP19.4■□□□□ 0.7
TRIM35-203ENST00000521253 PLAG1Q6DJT9 500 aa19.4■□□□□ 0.7
TRIM35-203ENST00000521253 PAPD4Q6PIY7 484 aaKnown RBP19.4■□□□□ 0.7
TRIM35-203ENST00000521253 ISLR2Q6UXK2 745 aa19.4■□□□□ 0.7
TRIM35-203ENST00000521253 ZNF793Q6ZN11 406 aa19.4■□□□□ 0.7
TRIM35-203ENST00000521253 LINC00696Q6ZRV3 163 aa19.4■□□□□ 0.7
TRIM35-203ENST00000521253 RPS27LQ71UM5 84 aaKnown RBP19.4■□□□□ 0.7
TRIM35-203ENST00000521253 TDRPQ86YL5 185 aa19.4■□□□□ 0.7
TRIM35-203ENST00000521253 CYP4X1Q8N118 509 aa19.4■□□□□ 0.7
TRIM35-203ENST00000521253 SIRT6Q8N6T7 355 aa19.4■□□□□ 0.7
TRIM35-203ENST00000521253 SRFBP1Q8NEF9 429 aaKnown RBP19.4■□□□□ 0.7
TRIM35-203ENST00000521253 EPS8L3Q8TE67 593 aaKnown RBP19.4■□□□□ 0.7
TRIM35-203ENST00000521253 MTERF1Q99551 399 aaKnown RBP19.4■□□□□ 0.7
TRIM35-203ENST00000521253 TBCDQ9BTW9 1192 aa19.4■□□□□ 0.7
TRIM35-203ENST00000521253 PRDM9Q9NQV7 894 aa19.4■□□□□ 0.7
TRIM35-203ENST00000521253 PTGFRNQ9P2B2 879 aa19.4■□□□□ 0.7
TRIM35-203ENST00000521253 B3GNT3Q9Y2A9 372 aa19.4■□□□□ 0.7
TRIM35-203ENST00000521253 IGKV3D-11A0A0A0MRZ8 115 aa19.39■□□□□ 0.69
TRIM35-203ENST00000521253 TTLL8A6PVC2 850 aa19.39■□□□□ 0.69
TRIM35-203ENST00000521253 SAP18O00422 153 aaKnown RBP19.39■□□□□ 0.69
TRIM35-203ENST00000521253 GSTA1P08263 222 aa19.39■□□□□ 0.69
TRIM35-203ENST00000521253 SOX11P35716 441 aa19.39■□□□□ 0.69
TRIM35-203ENST00000521253 LIM2P55344 173 aa19.39■□□□□ 0.69
TRIM35-203ENST00000521253 AP2B1P63010 937 aa19.39■□□□□ 0.69
TRIM35-203ENST00000521253 ACTN3Q08043 901 aaPredicted RBP19.39■□□□□ 0.69
TRIM35-203ENST00000521253 TRAF3Q13114 568 aa19.39■□□□□ 0.69
TRIM35-203ENST00000521253 MFAP5Q13361 173 aa19.39■□□□□ 0.69
TRIM35-203ENST00000521253 ZRSR2Q15696 482 aaKnown RBP19.39■□□□□ 0.69
TRIM35-203ENST00000521253 BTBD16Q32M84 506 aa19.39■□□□□ 0.69
TRIM35-203ENST00000521253 PLEKHN1Q494U1 663 aaPredicted RBP19.39■□□□□ 0.69
TRIM35-203ENST00000521253 CRB2Q5IJ48 1285 aa19.39■□□□□ 0.69
TRIM35-203ENST00000521253 TMEM52Q8NDY8 209 aa19.39■□□□□ 0.69
TRIM35-203ENST00000521253 WDR20Q8TBZ3 569 aa19.39■□□□□ 0.69
TRIM35-203ENST00000521253 ADAMTS18Q8TE60 1221 aa19.39■□□□□ 0.69
TRIM35-203ENST00000521253 ZNF483Q8TF39 744 aaPredicted RBP19.39■□□□□ 0.69
TRIM35-203ENST00000521253 REPS1Q96D71 796 aa19.39■□□□□ 0.69
TRIM35-203ENST00000521253 CSF3RQ99062 836 aa19.39■□□□□ 0.69
TRIM35-203ENST00000521253 LPAR4Q99677 370 aa19.39■□□□□ 0.69
TRIM35-203ENST00000521253 NTMT1Q9BV86 223 aa19.39■□□□□ 0.69
TRIM35-203ENST00000521253 C1QTNF3Q9BXJ4 246 aa19.39■□□□□ 0.69
TRIM35-203ENST00000521253 ROGDIQ9GZN7 287 aa19.39■□□□□ 0.69
TRIM35-203ENST00000521253 EPS8L2Q9H6S3 715 aa19.39■□□□□ 0.69
TRIM35-203ENST00000521253 SEMA4BQ9NPR2 832 aaPredicted RBP19.39■□□□□ 0.69
TRIM35-203ENST00000521253 SLAMF7Q9NQ25 335 aa19.39■□□□□ 0.69
TRIM35-203ENST00000521253 NECTIN3Q9NQS3 549 aa19.39■□□□□ 0.69
TRIM35-203ENST00000521253 DAPP1Q9UN19 280 aa19.39■□□□□ 0.69
TRIM35-203ENST00000521253 MMACHCQ9Y4U1 282 aa19.39■□□□□ 0.69
TRIM35-203ENST00000521253 CSAG2Q9Y5P2 127 aa19.39■□□□□ 0.69
TRIM35-203ENST00000521253 UBR5O95071 2799 aaPredicted RBP19.39■□□□□ 0.69
TRIM35-203ENST00000521253 TCRBV16S1A1N1A0A5B0 115 aa19.38■□□□□ 0.69
TRIM35-203ENST00000521253 DLX3O60479 287 aa19.38■□□□□ 0.69
TRIM35-203ENST00000521253 TAC1P20366 129 aa19.38■□□□□ 0.69
TRIM35-203ENST00000521253 HIST1H1TP22492 207 aaPredicted RBP19.38■□□□□ 0.69
TRIM35-203ENST00000521253 ATP5A1P25705 553 aaKnown RBP19.38■□□□□ 0.69
TRIM35-203ENST00000521253 NEK2P51955 445 aa19.38■□□□□ 0.69
TRIM35-203ENST00000521253 HNRNPFP52597 415 aaKnown RBP19.38■□□□□ 0.69
TRIM35-203ENST00000521253 RPS13P62277 151 aaKnown RBP19.38■□□□□ 0.69
TRIM35-203ENST00000521253 IGFBP7Q16270 282 aa19.38■□□□□ 0.69
TRIM35-203ENST00000521253 B3GNTL1Q67FW5 361 aaPredicted RBP19.38■□□□□ 0.69
TRIM35-203ENST00000521253 WDR93Q6P2C0 686 aa19.38■□□□□ 0.69
TRIM35-203ENST00000521253 Q6ZS92 163 aa19.38■□□□□ 0.69
TRIM35-203ENST00000521253 SH2D5Q6ZV89 423 aa19.38■□□□□ 0.69
TRIM35-203ENST00000521253 SCUBE1Q8IWY4 988 aa19.38■□□□□ 0.69
TRIM35-203ENST00000521253 ACOT4Q8N9L9 421 aa19.38■□□□□ 0.69
TRIM35-203ENST00000521253 FAM47BQ8NA70 645 aa19.38■□□□□ 0.69
TRIM35-203ENST00000521253 PPP4R1Q8TF05 950 aa19.38■□□□□ 0.69
TRIM35-203ENST00000521253 AENQ8WTP8 325 aaKnown RBP19.38■□□□□ 0.69
TRIM35-203ENST00000521253 LMF1Q96S06 567 aa19.38■□□□□ 0.69
TRIM35-203ENST00000521253 SORBS1Q9BX66 1292 aaKnown RBP19.38■□□□□ 0.69
TRIM35-203ENST00000521253 KCMF1Q9P0J7 381 aa19.38■□□□□ 0.69
TRIM35-203ENST00000521253 A0A1B0GTL3 188 aa19.37■□□□□ 0.69
TRIM35-203ENST00000521253 CYR61O00622 381 aa19.37■□□□□ 0.69
TRIM35-203ENST00000521253 PPP6CO00743 305 aa19.37■□□□□ 0.69
TRIM35-203ENST00000521253 SCELO95171 688 aa19.37■□□□□ 0.69
TRIM35-203ENST00000521253 WISP1O95388 367 aa19.37■□□□□ 0.69
TRIM35-203ENST00000521253 KRT15P19012 456 aa19.37■□□□□ 0.69
TRIM35-203ENST00000521253 SSR2P43308 183 aa19.37■□□□□ 0.69
TRIM35-203ENST00000521253 CDH13P55290 713 aa19.37■□□□□ 0.69
TRIM35-203ENST00000521253 HERVK_113P63132 956 aa19.37■□□□□ 0.69
TRIM35-203ENST00000521253 PHEXP78562 749 aa19.37■□□□□ 0.69
TRIM35-203ENST00000521253 FOXK1P85037 733 aa19.37■□□□□ 0.69
TRIM35-203ENST00000521253 RASA2Q15283 850 aa19.37■□□□□ 0.69
TRIM35-203ENST00000521253 EXT1Q16394 746 aa19.37■□□□□ 0.69
TRIM35-203ENST00000521253 AP5B1Q2VPB7 878 aa19.37■□□□□ 0.69
TRIM35-203ENST00000521253 ARMC2Q8NEN0 867 aa19.37■□□□□ 0.69
TRIM35-203ENST00000521253 OR2W6PQ8NHA6 318 aa19.37■□□□□ 0.69
TRIM35-203ENST00000521253 M1APQ8TC57 530 aa19.37■□□□□ 0.69
TRIM35-203ENST00000521253 MAPKAP1Q9BPZ7 522 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms