RNA–Protein interactions for RNA: ENST00000521216.5

SKP1-208, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SKP1, Length 899 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-208ENST00000521216 NHLRC1Q6VVB1 395 aa4.24□□□□□ -1.73
SKP1-208ENST00000521216 TMEM64Q6YI46 380 aa4.24□□□□□ -1.73
SKP1-208ENST00000521216 CDHR3Q6ZTQ4 885 aa4.24□□□□□ -1.73
SKP1-208ENST00000521216 CCDC91Q7Z6B0 441 aa4.24□□□□□ -1.73
SKP1-208ENST00000521216 OR4N5Q8IXE1 308 aa4.24□□□□□ -1.73
SKP1-208ENST00000521216 CCDC170Q8IYT3 715 aa4.24□□□□□ -1.73
SKP1-208ENST00000521216 THEM5Q8N1Q8 247 aa4.24□□□□□ -1.73
SKP1-208ENST00000521216 NPRL2Q8WTW4 380 aa4.24□□□□□ -1.73
SKP1-208ENST00000521216 SNRNP40Q96DI7 357 aaKnown RBP4.24□□□□□ -1.73
SKP1-208ENST00000521216 PANX3Q96QZ0 392 aa4.24□□□□□ -1.73
SKP1-208ENST00000521216 FUT8Q9BYC5 575 aa4.24□□□□□ -1.73
SKP1-208ENST00000521216 ZNF350Q9GZX5 532 aa4.24□□□□□ -1.73
SKP1-208ENST00000521216 PARLQ9H300 379 aa4.24□□□□□ -1.73
SKP1-208ENST00000521216 CNIH4Q9P003 139 aa4.24□□□□□ -1.73
SKP1-208ENST00000521216 NOL7Q9UMY1 257 aaKnown RBP4.24□□□□□ -1.73
SKP1-208ENST00000521216 LIPT1Q9Y234 373 aa4.24□□□□□ -1.73
SKP1-208ENST00000521216 CACNA1FO60840 1977 aa4.23□□□□□ -1.73
SKP1-208ENST00000521216 IGHV3OR16-10A0A075B7F0 116 aa4.23□□□□□ -1.73
SKP1-208ENST00000521216 A0A087X0K7 114 aa4.23□□□□□ -1.73
SKP1-208ENST00000521216 IGHV3-20A0A0C4DH32 117 aa4.23□□□□□ -1.73
SKP1-208ENST00000521216 IGHV3-38A0A0C4DH36 116 aa4.23□□□□□ -1.73
SKP1-208ENST00000521216 A8MU76 341 aa4.23□□□□□ -1.73
SKP1-208ENST00000521216 EPM2AB3EWF7 344 aa4.23□□□□□ -1.73
SKP1-208ENST00000521216 ZNF749O43361 778 aa4.23□□□□□ -1.73
SKP1-208ENST00000521216 TNFSF12O43508 249 aa4.23□□□□□ -1.73
SKP1-208ENST00000521216 PI15O43692 258 aa4.23□□□□□ -1.73
SKP1-208ENST00000521216 SNAP91O60641 907 aa4.23□□□□□ -1.73
SKP1-208ENST00000521216 SBK2P0C263 348 aa4.23□□□□□ -1.73
SKP1-208ENST00000521216 KRT5P13647 590 aa4.23□□□□□ -1.73
SKP1-208ENST00000521216 EDNRAP25101 427 aa4.23□□□□□ -1.73
SKP1-208ENST00000521216 ACKR3P25106 362 aa4.23□□□□□ -1.73
SKP1-208ENST00000521216 CLCN4P51793 760 aa4.23□□□□□ -1.73
SKP1-208ENST00000521216 BACE1P56817 501 aa4.23□□□□□ -1.73
SKP1-208ENST00000521216 FKBP3Q00688 224 aaKnown RBP4.23□□□□□ -1.73
SKP1-208ENST00000521216 PAX8Q06710 450 aa4.23□□□□□ -1.73
SKP1-208ENST00000521216 ZNF146Q15072 292 aa4.23□□□□□ -1.73
SKP1-208ENST00000521216 MLF2Q15773 248 aaPredicted RBP4.23□□□□□ -1.73
SKP1-208ENST00000521216 GLIPR1L2Q4G1C9 344 aa4.23□□□□□ -1.73
SKP1-208ENST00000521216 ZNF776Q68DI1 518 aaPredicted RBP4.23□□□□□ -1.73
SKP1-208ENST00000521216 KCTD9Q7L273 389 aa4.23□□□□□ -1.73
SKP1-208ENST00000521216 KCNMB4Q86W47 210 aa4.23□□□□□ -1.73
SKP1-208ENST00000521216 SPPL2AQ8TCT8 520 aa4.23□□□□□ -1.73
SKP1-208ENST00000521216 GPR148Q8TDV2 347 aa4.23□□□□□ -1.73
SKP1-208ENST00000521216 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.23□□□□□ -1.73
SKP1-208ENST00000521216 GAL3ST4Q96RP7 486 aa4.23□□□□□ -1.73
SKP1-208ENST00000521216 SOSTQ9BQB4 213 aa4.23□□□□□ -1.73
SKP1-208ENST00000521216 CHCHD5Q9BSY4 110 aa4.23□□□□□ -1.73
SKP1-208ENST00000521216 CACNG6Q9BXT2 260 aa4.23□□□□□ -1.73
SKP1-208ENST00000521216 PLEKHA3Q9HB20 300 aa4.23□□□□□ -1.73
SKP1-208ENST00000521216 PILRAQ9UKJ1 303 aa4.23□□□□□ -1.73
SKP1-208ENST00000521216 ZNF510Q9Y2H8 683 aa4.23□□□□□ -1.73
SKP1-208ENST00000521216 A0A0A6YYC8 382 aaPredicted RBP4.22□□□□□ -1.73
SKP1-208ENST00000521216 IGKV3D-20A0A0C4DH25 116 aa4.22□□□□□ -1.73
SKP1-208ENST00000521216 SMIM30A4D0T7 59 aa4.22□□□□□ -1.73
SKP1-208ENST00000521216 ANHXE9PGG2 379 aa4.22□□□□□ -1.73
SKP1-208ENST00000521216 I3L1I5 382 aaPredicted RBP4.22□□□□□ -1.73
SKP1-208ENST00000521216 RNF103O00237 685 aa4.22□□□□□ -1.73
SKP1-208ENST00000521216 PDHXO00330 501 aa4.22□□□□□ -1.73
SKP1-208ENST00000521216 TRAFD1O14545 582 aaPredicted RBP4.22□□□□□ -1.73
SKP1-208ENST00000521216 HPRP00739 348 aa4.22□□□□□ -1.73
SKP1-208ENST00000521216 CTNNB1P35222 781 aa4.22□□□□□ -1.73
SKP1-208ENST00000521216 PEX3P56589 373 aa4.22□□□□□ -1.73
SKP1-208ENST00000521216 IRX6P78412 446 aaPredicted RBP4.22□□□□□ -1.73
SKP1-208ENST00000521216 RBBP4Q09028 425 aa4.22□□□□□ -1.73
SKP1-208ENST00000521216 RPS6KA1Q15418 735 aa4.22□□□□□ -1.73
SKP1-208ENST00000521216 UPP1Q16831 310 aa4.22□□□□□ -1.73
SKP1-208ENST00000521216 SMU1Q2TAY7 513 aa4.22□□□□□ -1.73
SKP1-208ENST00000521216 ALKBH5Q6P6C2 394 aaKnown RBP4.22□□□□□ -1.73
SKP1-208ENST00000521216 ASPGQ86U10 573 aa4.22□□□□□ -1.73
SKP1-208ENST00000521216 SIAH3Q8IW03 269 aa4.22□□□□□ -1.73
SKP1-208ENST00000521216 ZNF444Q8N0Y2 327 aaPredicted RBP4.22□□□□□ -1.73
SKP1-208ENST00000521216 NUP93Q8N1F7 819 aa4.22□□□□□ -1.73
SKP1-208ENST00000521216 PDLIM5Q96HC4 596 aaKnown RBP4.22□□□□□ -1.73
SKP1-208ENST00000521216 ZNF597Q96LX8 424 aa4.22□□□□□ -1.73
SKP1-208ENST00000521216 TRIM7Q9C029 511 aa4.22□□□□□ -1.73
SKP1-208ENST00000521216 FNDC4Q9H6D8 234 aaPredicted RBP4.22□□□□□ -1.73
SKP1-208ENST00000521216 ZNF665Q9H7R5 613 aa4.22□□□□□ -1.73
SKP1-208ENST00000521216 FAM212BQ9NTI7 297 aaPredicted RBP4.22□□□□□ -1.73
SKP1-208ENST00000521216 ARGLU1Q9NWB6 273 aaPredicted RBP4.22□□□□□ -1.73
SKP1-208ENST00000521216 ZNF319Q9P2F9 582 aa4.22□□□□□ -1.73
SKP1-208ENST00000521216 KLK13Q9UKR3 277 aa4.22□□□□□ -1.73
SKP1-208ENST00000521216 IGLV4-3A0A075B6K6 122 aa4.21□□□□□ -1.74
SKP1-208ENST00000521216 ANGPTL1O95841 491 aa4.21□□□□□ -1.74
SKP1-208ENST00000521216 GAS8O95995 478 aa4.21□□□□□ -1.74
SKP1-208ENST00000521216 PCP11498 1178 aaKnown RBP4.21□□□□□ -1.74
SKP1-208ENST00000521216 ACADSP16219 412 aa4.21□□□□□ -1.74
SKP1-208ENST00000521216 CAPN2P17655 700 aa4.21□□□□□ -1.74
SKP1-208ENST00000521216 RPL9P32969 192 aaKnown RBP4.21□□□□□ -1.74
SKP1-208ENST00000521216 NDUFV3P56181 108 aaKnown RBP4.21□□□□□ -1.74
SKP1-208ENST00000521216 NME5P56597 212 aa4.21□□□□□ -1.74
SKP1-208ENST00000521216 ABCE1P61221 599 aaKnown RBP4.21□□□□□ -1.74
SKP1-208ENST00000521216 STX1BP61266 288 aa4.21□□□□□ -1.74
SKP1-208ENST00000521216 FCHO2Q0JRZ9 810 aa4.21□□□□□ -1.74
SKP1-208ENST00000521216 GPR50Q13585 617 aa4.21□□□□□ -1.74
SKP1-208ENST00000521216 SLC1A5Q15758 541 aa4.21□□□□□ -1.74
SKP1-208ENST00000521216 KNOP1Q1ED39 458 aaKnown RBP4.21□□□□□ -1.74
SKP1-208ENST00000521216 RFTN2Q52LD8 501 aaPredicted RBP4.21□□□□□ -1.74
SKP1-208ENST00000521216 CCDC184Q52MB2 194 aa4.21□□□□□ -1.74
SKP1-208ENST00000521216 ZNF789Q5FWF6 425 aa4.21□□□□□ -1.74
SKP1-208ENST00000521216 GLRA4Q5JXX5 417 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms