RNA–Protein interactions for RNA: ENST00000520755.5

LSM1-203, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best) BASIC

Gene LSM1, Length 975 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-203ENST00000520755 LSM12Q3MHD2 195 aaKnown RBP14.51□□□□□ -0.09
LSM1-203ENST00000520755 GALNTL6Q49A17 601 aa14.51□□□□□ -0.09
LSM1-203ENST00000520755 RFTN2Q52LD8 501 aaPredicted RBP14.51□□□□□ -0.09
LSM1-203ENST00000520755 TMEM35AQ53FP2 167 aa14.51□□□□□ -0.09
LSM1-203ENST00000520755 C6orf136Q5SQH8 315 aa14.51□□□□□ -0.09
LSM1-203ENST00000520755 MANEAQ5SRI9 462 aa14.51□□□□□ -0.09
LSM1-203ENST00000520755 COMMD6Q7Z4G1 85 aa14.51□□□□□ -0.09
LSM1-203ENST00000520755 SPATA21Q7Z572 469 aa14.51□□□□□ -0.09
LSM1-203ENST00000520755 HOMEZQ8IX15 550 aa14.51□□□□□ -0.09
LSM1-203ENST00000520755 KDF1Q8NAX2 398 aaPredicted RBP14.51□□□□□ -0.09
LSM1-203ENST00000520755 OR9A4Q8NGU2 314 aa14.51□□□□□ -0.09
LSM1-203ENST00000520755 ACTRT2Q8TDY3 377 aa14.51□□□□□ -0.09
LSM1-203ENST00000520755 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.51□□□□□ -0.09
LSM1-203ENST00000520755 COL26A1Q96A83 441 aa14.51□□□□□ -0.09
LSM1-203ENST00000520755 TUBGCP3Q96CW5 907 aa14.51□□□□□ -0.09
LSM1-203ENST00000520755 CNTNAP3BQ96NU0 1288 aa14.51□□□□□ -0.09
LSM1-203ENST00000520755 ELAC2Q9BQ52 826 aaKnown RBP14.51□□□□□ -0.09
LSM1-203ENST00000520755 DPH2Q9BQC3 489 aaPredicted RBP14.51□□□□□ -0.09
LSM1-203ENST00000520755 CNTNAP3Q9BZ76 1288 aa14.51□□□□□ -0.09
LSM1-203ENST00000520755 DPH1Q9BZG8 443 aa14.51□□□□□ -0.09
LSM1-203ENST00000520755 NSRP1Q9H0G5 558 aaKnown RBP14.51□□□□□ -0.09
LSM1-203ENST00000520755 LRTM1Q9HBL6 345 aa14.51□□□□□ -0.09
LSM1-203ENST00000520755 PRDM7Q9NQW5 492 aa14.51□□□□□ -0.09
LSM1-203ENST00000520755 RIC8BQ9NVN3 520 aa14.51□□□□□ -0.09
LSM1-203ENST00000520755 C1orf109Q9NX04 203 aa14.51□□□□□ -0.09
LSM1-203ENST00000520755 DLGAP4Q9Y2H0 992 aa14.51□□□□□ -0.09
LSM1-203ENST00000520755 CELSR3Q9NYQ7 3312 aa14.51□□□□□ -0.09
LSM1-203ENST00000520755 URADA6NGE7 173 aa14.5□□□□□ -0.09
LSM1-203ENST00000520755 C9J4A7 227 aa14.5□□□□□ -0.09
LSM1-203ENST00000520755 PEX11AO75192 247 aa14.5□□□□□ -0.09
LSM1-203ENST00000520755 SCELO95171 688 aa14.5□□□□□ -0.09
LSM1-203ENST00000520755 FAM107AO95990 144 aa14.5□□□□□ -0.09
LSM1-203ENST00000520755 ALOX12P18054 663 aa14.5□□□□□ -0.09
LSM1-203ENST00000520755 TCN2P20062 427 aa14.5□□□□□ -0.09
LSM1-203ENST00000520755 CERS1P27544 350 aa14.5□□□□□ -0.09
LSM1-203ENST00000520755 TPP2P29144 1249 aaPredicted RBP14.5□□□□□ -0.09
LSM1-203ENST00000520755 AVPR1BP47901 424 aa14.5□□□□□ -0.09
LSM1-203ENST00000520755 PLA2G16P53816 162 aa14.5□□□□□ -0.09
LSM1-203ENST00000520755 SRSF6Q13247 344 aaKnown RBP14.5□□□□□ -0.09
LSM1-203ENST00000520755 FAM53BQ14153 422 aa14.5□□□□□ -0.09
LSM1-203ENST00000520755 AP5B1Q2VPB7 878 aa14.5□□□□□ -0.09
LSM1-203ENST00000520755 NKAIN1Q4KMZ8 207 aa14.5□□□□□ -0.09
LSM1-203ENST00000520755 ARHGAP40Q5TG30 622 aa14.5□□□□□ -0.09
LSM1-203ENST00000520755 MLIPQ5VWP3 458 aa14.5□□□□□ -0.09
LSM1-203ENST00000520755 TMEM198Q66K66 360 aa14.5□□□□□ -0.09
LSM1-203ENST00000520755 OGFOD2Q6N063 350 aa14.5□□□□□ -0.09
LSM1-203ENST00000520755 PRMT9Q6P2P2 845 aa14.5□□□□□ -0.09
LSM1-203ENST00000520755 LRRC69Q6ZNQ3 347 aa14.5□□□□□ -0.09
LSM1-203ENST00000520755 CHSY3Q70JA7 882 aa14.5□□□□□ -0.09
LSM1-203ENST00000520755 ABHD13Q7L211 337 aa14.5□□□□□ -0.09
LSM1-203ENST00000520755 PIGWQ7Z7B1 504 aa14.5□□□□□ -0.09
LSM1-203ENST00000520755 SPACA3Q8IXA5 215 aa14.5□□□□□ -0.09
LSM1-203ENST00000520755 KIAA1143Q96AT1 154 aaPredicted RBP14.5□□□□□ -0.09
LSM1-203ENST00000520755 MMABQ96EY8 250 aaPredicted RBP14.5□□□□□ -0.09
LSM1-203ENST00000520755 PPP3R2Q96LZ3 170 aa14.5□□□□□ -0.09
LSM1-203ENST00000520755 CCT8L2Q96SF2 557 aa14.5□□□□□ -0.09
LSM1-203ENST00000520755 C1orf50Q9BV19 199 aa14.5□□□□□ -0.09
LSM1-203ENST00000520755 EBPLQ9BY08 206 aa14.5□□□□□ -0.09
LSM1-203ENST00000520755 GPN2Q9H9Y4 310 aaPredicted RBP14.5□□□□□ -0.09
LSM1-203ENST00000520755 ANKHQ9HCJ1 492 aa14.5□□□□□ -0.09
LSM1-203ENST00000520755 ZNF304Q9HCX3 659 aa14.5□□□□□ -0.09
LSM1-203ENST00000520755 TCF7L2Q9NQB0 619 aa14.5□□□□□ -0.09
LSM1-203ENST00000520755 SIRT5Q9NXA8 310 aa14.5□□□□□ -0.09
LSM1-203ENST00000520755 IFT80Q9P2H3 777 aaPredicted RBP14.5□□□□□ -0.09
LSM1-203ENST00000520755 GPN3Q9UHW5 284 aaPredicted RBP14.5□□□□□ -0.09
LSM1-203ENST00000520755 CDC14AQ9UNH5 594 aa14.5□□□□□ -0.09
LSM1-203ENST00000520755 POLR3HQ9Y535 204 aaPredicted RBP14.5□□□□□ -0.09
LSM1-203ENST00000520755 SLC22A7Q9Y694 548 aa14.5□□□□□ -0.09
LSM1-203ENST00000520755 AHCTF1Q8WYP5 2266 aa14.5□□□□□ -0.09
LSM1-203ENST00000520755 SEC16AO15027 2179 aa14.5□□□□□ -0.09
LSM1-203ENST00000520755 A0A0A6YYD5 115 aa14.49□□□□□ -0.09
LSM1-203ENST00000520755 ZNF860A6NHJ4 632 aa14.49□□□□□ -0.09
LSM1-203ENST00000520755 TMPRSS11DO60235 418 aa14.49□□□□□ -0.09
LSM1-203ENST00000520755 GALR3O60755 368 aaPredicted RBP14.49□□□□□ -0.09
LSM1-203ENST00000520755 DNAJB6O75190 326 aa14.49□□□□□ -0.09
LSM1-203ENST00000520755 GBAP04062 536 aa14.49□□□□□ -0.09
LSM1-203ENST00000520755 LIFP15018 202 aa14.49□□□□□ -0.09
LSM1-203ENST00000520755 FBLP22087 321 aaKnown RBP14.49□□□□□ -0.09
LSM1-203ENST00000520755 TIA1P31483 386 aaKnown RBP eCLIP14.49□□□□□ -0.09
LSM1-203ENST00000520755 RAP1GDS1P52306 607 aa14.49□□□□□ -0.09
LSM1-203ENST00000520755 ARFIP1P53367 373 aa14.49□□□□□ -0.09
LSM1-203ENST00000520755 ACSM2AQ08AH3 577 aa14.49□□□□□ -0.09
LSM1-203ENST00000520755 DNASE1L3Q13609 305 aa14.49□□□□□ -0.09
LSM1-203ENST00000520755 HERC3Q15034 1050 aa14.49□□□□□ -0.09
LSM1-203ENST00000520755 DEFB134Q4QY38 66 aa14.49□□□□□ -0.09
LSM1-203ENST00000520755 ATP6AP1LQ52LC2 224 aa14.49□□□□□ -0.09
LSM1-203ENST00000520755 SPIN4Q56A73 249 aa14.49□□□□□ -0.09
LSM1-203ENST00000520755 SPDYAQ5MJ70 313 aa14.49□□□□□ -0.09
LSM1-203ENST00000520755 ACSM2BQ68CK6 577 aa14.49□□□□□ -0.09
LSM1-203ENST00000520755 GALNT18Q6P9A2 607 aa14.49□□□□□ -0.09
LSM1-203ENST00000520755 TRIM40Q6P9F5 258 aa14.49□□□□□ -0.09
LSM1-203ENST00000520755 FAM198BQ6UWH4 519 aa14.49□□□□□ -0.09
LSM1-203ENST00000520755 ZNF517Q6ZMY9 492 aaPredicted RBP14.49□□□□□ -0.09
LSM1-203ENST00000520755 RIPOR1Q6ZS17 1223 aa14.49□□□□□ -0.09
LSM1-203ENST00000520755 CPLX4Q7Z7G2 160 aa14.49□□□□□ -0.09
LSM1-203ENST00000520755 RGMAQ96B86 450 aa14.49□□□□□ -0.09
LSM1-203ENST00000520755 MVB12AQ96EY5 273 aa14.49□□□□□ -0.09
LSM1-203ENST00000520755 SLC45A3Q96JT2 553 aa14.49□□□□□ -0.09
LSM1-203ENST00000520755 MARK4Q96L34 752 aa14.49□□□□□ -0.09
LSM1-203ENST00000520755 KCNC2Q96PR1 638 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms