RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 IGHV4-4A0A075B6R2 117 aa4.66□□□□□ -1.66
HMGB1P46-201ENST00000520062 FAM72CH0Y354 149 aa4.66□□□□□ -1.66
HMGB1P46-201ENST00000520062 CCSO14618 274 aa4.66□□□□□ -1.66
HMGB1P46-201ENST00000520062 OGTO15294 1046 aa4.66□□□□□ -1.66
HMGB1P46-201ENST00000520062 TRMUO75648 421 aaKnown RBP4.66□□□□□ -1.66
HMGB1P46-201ENST00000520062 OR6B1O95007 311 aa4.66□□□□□ -1.66
HMGB1P46-201ENST00000520062 GHRP10912 638 aa4.66□□□□□ -1.66
HMGB1P46-201ENST00000520062 KRT5P13647 590 aa4.66□□□□□ -1.66
HMGB1P46-201ENST00000520062 MARCKSP29966 332 aaPredicted RBP4.66□□□□□ -1.66
HMGB1P46-201ENST00000520062 HPDP32754 393 aaPredicted RBP4.66□□□□□ -1.66
HMGB1P46-201ENST00000520062 TIMP3P35625 211 aa4.66□□□□□ -1.66
HMGB1P46-201ENST00000520062 RPL36AP83881 106 aaKnown RBP4.66□□□□□ -1.66
HMGB1P46-201ENST00000520062 GUCY2DQ02846 1103 aa4.66□□□□□ -1.66
HMGB1P46-201ENST00000520062 TMEM132DQ14C87 1099 aa4.66□□□□□ -1.66
HMGB1P46-201ENST00000520062 EFTUD2Q15029 972 aaKnown RBP eCLIP4.66□□□□□ -1.66
HMGB1P46-201ENST00000520062 TAB1Q15750 504 aa4.66□□□□□ -1.66
HMGB1P46-201ENST00000520062 LRRC37A5PQ49AS3 106 aa4.66□□□□□ -1.66
HMGB1P46-201ENST00000520062 FAM106AQ4KMX7 169 aa4.66□□□□□ -1.66
HMGB1P46-201ENST00000520062 FAM72AQ5TYM5 149 aa4.66□□□□□ -1.66
HMGB1P46-201ENST00000520062 NKAIN2Q5VXU1 208 aa4.66□□□□□ -1.66
HMGB1P46-201ENST00000520062 FAM72DQ6L9T8 149 aa4.66□□□□□ -1.66
HMGB1P46-201ENST00000520062 WDR88Q6ZMY6 472 aa4.66□□□□□ -1.66
HMGB1P46-201ENST00000520062 RFPL4BQ6ZWI9 263 aa4.66□□□□□ -1.66
HMGB1P46-201ENST00000520062 TRMT1LQ7Z2T5 733 aaKnown RBP4.66□□□□□ -1.66
HMGB1P46-201ENST00000520062 NLRP14Q86W24 1093 aa4.66□□□□□ -1.66
HMGB1P46-201ENST00000520062 FAM72BQ86X60 149 aa4.66□□□□□ -1.66
HMGB1P46-201ENST00000520062 ELMOD1Q8N336 334 aa4.66□□□□□ -1.66
HMGB1P46-201ENST00000520062 CNBD1Q8NA66 436 aa4.66□□□□□ -1.66
HMGB1P46-201ENST00000520062 OR5T2Q8NGG2 359 aa4.66□□□□□ -1.66
HMGB1P46-201ENST00000520062 OR4D10Q8NGI6 311 aa4.66□□□□□ -1.66
HMGB1P46-201ENST00000520062 OMA1Q96E52 524 aa4.66□□□□□ -1.66
HMGB1P46-201ENST00000520062 GPR137Q96N19 417 aa4.66□□□□□ -1.66
HMGB1P46-201ENST00000520062 UHRF2Q96PU4 802 aa4.66□□□□□ -1.66
HMGB1P46-201ENST00000520062 ABCG4Q9H172 646 aa4.66□□□□□ -1.66
HMGB1P46-201ENST00000520062 DPEP3Q9H4B8 488 aa4.66□□□□□ -1.66
HMGB1P46-201ENST00000520062 SLC52A3Q9NQ40 469 aa4.66□□□□□ -1.66
HMGB1P46-201ENST00000520062 ZNF71Q9NQZ8 489 aaPredicted RBP4.66□□□□□ -1.66
HMGB1P46-201ENST00000520062 POLE3Q9NRF9 147 aa4.66□□□□□ -1.66
HMGB1P46-201ENST00000520062 PLEK2Q9NYT0 353 aa4.66□□□□□ -1.66
HMGB1P46-201ENST00000520062 ZNF319Q9P2F9 582 aa4.66□□□□□ -1.66
HMGB1P46-201ENST00000520062 FAM153AQ9UHL3 310 aa4.66□□□□□ -1.66
HMGB1P46-201ENST00000520062 NARFQ9UHQ1 456 aa4.66□□□□□ -1.66
HMGB1P46-201ENST00000520062 RNF123Q5XPI4 1314 aa4.66□□□□□ -1.66
HMGB1P46-201ENST00000520062 KIAA1210Q9ULL0 1709 aa4.66□□□□□ -1.66
HMGB1P46-201ENST00000520062 EME2A4GXA9 379 aaPredicted RBP4.65□□□□□ -1.67
HMGB1P46-201ENST00000520062 RGSL1A5PLK6 1076 aa4.65□□□□□ -1.67
HMGB1P46-201ENST00000520062 P2RX6O15547 441 aa4.65□□□□□ -1.67
HMGB1P46-201ENST00000520062 GMNNO75496 209 aa4.65□□□□□ -1.67
HMGB1P46-201ENST00000520062 PRSS56P0CW18 603 aa4.65□□□□□ -1.67
HMGB1P46-201ENST00000520062 B4GALT1P15291 398 aa4.65□□□□□ -1.67
HMGB1P46-201ENST00000520062 ANOS1P23352 680 aa4.65□□□□□ -1.67
HMGB1P46-201ENST00000520062 RPA1P27694 616 aa4.65□□□□□ -1.67
HMGB1P46-201ENST00000520062 GJB2P29033 226 aa4.65□□□□□ -1.67
HMGB1P46-201ENST00000520062 ALDH3B1P43353 468 aa4.65□□□□□ -1.67
HMGB1P46-201ENST00000520062 TNFRSF4P43489 277 aa4.65□□□□□ -1.67
HMGB1P46-201ENST00000520062 SLC6A12P48065 614 aa4.65□□□□□ -1.67
HMGB1P46-201ENST00000520062 PITPNBP48739 271 aa4.65□□□□□ -1.67
HMGB1P46-201ENST00000520062 NUMBP49757 651 aa4.65□□□□□ -1.67
HMGB1P46-201ENST00000520062 HSPA14Q0VDF9 509 aa4.65□□□□□ -1.67
HMGB1P46-201ENST00000520062 FASTKD1Q53R41 847 aaKnown RBP4.65□□□□□ -1.67
HMGB1P46-201ENST00000520062 CDHR3Q6ZTQ4 885 aa4.65□□□□□ -1.67
HMGB1P46-201ENST00000520062 BTN2A1Q7KYR7 527 aa4.65□□□□□ -1.67
HMGB1P46-201ENST00000520062 C17orf64Q86WR6 236 aa4.65□□□□□ -1.67
HMGB1P46-201ENST00000520062 LACC1Q8IV20 430 aa4.65□□□□□ -1.67
HMGB1P46-201ENST00000520062 APLFQ8IW19 511 aaPredicted RBP4.65□□□□□ -1.67
HMGB1P46-201ENST00000520062 SLC43A2Q8N370 569 aa4.65□□□□□ -1.67
HMGB1P46-201ENST00000520062 ESAMQ96AP7 390 aa4.65□□□□□ -1.67
HMGB1P46-201ENST00000520062 EPYCQ99645 322 aa4.65□□□□□ -1.67
HMGB1P46-201ENST00000520062 FUCA2Q9BTY2 467 aa4.65□□□□□ -1.67
HMGB1P46-201ENST00000520062 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.65□□□□□ -1.67
HMGB1P46-201ENST00000520062 POMT2Q9UKY4 750 aa4.65□□□□□ -1.67
HMGB1P46-201ENST00000520062 PMS2P5A8MQ11 134 aa4.64□□□□□ -1.67
HMGB1P46-201ENST00000520062 KPNA7A9QM74 516 aa4.64□□□□□ -1.67
HMGB1P46-201ENST00000520062 EEF2KO00418 725 aaKnown RBP4.64□□□□□ -1.67
HMGB1P46-201ENST00000520062 NDC80O14777 642 aa4.64□□□□□ -1.67
HMGB1P46-201ENST00000520062 LMX1BO60663 402 aa4.64□□□□□ -1.67
HMGB1P46-201ENST00000520062 FGF19O95750 216 aa4.64□□□□□ -1.67
HMGB1P46-201ENST00000520062 PDGFBP01127 241 aaPredicted RBP4.64□□□□□ -1.67
HMGB1P46-201ENST00000520062 APRTP07741 180 aa4.64□□□□□ -1.67
HMGB1P46-201ENST00000520062 MYOGP15173 224 aa4.64□□□□□ -1.67
HMGB1P46-201ENST00000520062 DNAJB1P25685 340 aa4.64□□□□□ -1.67
HMGB1P46-201ENST00000520062 CSNK2BP67870 215 aa4.64□□□□□ -1.67
HMGB1P46-201ENST00000520062 DRP2Q13474 957 aa4.64□□□□□ -1.67
HMGB1P46-201ENST00000520062 DPYSQ14117 519 aa4.64□□□□□ -1.67
HMGB1P46-201ENST00000520062 HEPACAMQ14CZ8 416 aa4.64□□□□□ -1.67
HMGB1P46-201ENST00000520062 TAF1BQ53T94 588 aaPredicted RBP4.64□□□□□ -1.67
HMGB1P46-201ENST00000520062 LYPLAL1Q5VWZ2 237 aa4.64□□□□□ -1.67
HMGB1P46-201ENST00000520062 ZCCHC12Q6PEW1 402 aa4.64□□□□□ -1.67
HMGB1P46-201ENST00000520062 TMEM64Q6YI46 380 aa4.64□□□□□ -1.67
HMGB1P46-201ENST00000520062 SYVN1Q86TM6 617 aa4.64□□□□□ -1.67
HMGB1P46-201ENST00000520062 TMEM178AQ8NBL3 297 aa4.64□□□□□ -1.67
HMGB1P46-201ENST00000520062 OR6M1Q8NGM8 313 aa4.64□□□□□ -1.67
HMGB1P46-201ENST00000520062 C8orf46Q8TAG6 207 aa4.64□□□□□ -1.67
HMGB1P46-201ENST00000520062 CCDC110Q8TBZ0 833 aa4.64□□□□□ -1.67
HMGB1P46-201ENST00000520062 DQX1Q8TE96 717 aaKnown RBP4.64□□□□□ -1.67
HMGB1P46-201ENST00000520062 TSGA13Q96PP4 275 aa4.64□□□□□ -1.67
HMGB1P46-201ENST00000520062 KRTAP4-11Q9BYQ6 195 aa4.64□□□□□ -1.67
HMGB1P46-201ENST00000520062 RAB17Q9H0T7 212 aa4.64□□□□□ -1.67
HMGB1P46-201ENST00000520062 FNDC4Q9H6D8 234 aaPredicted RBP4.64□□□□□ -1.67
HMGB1P46-201ENST00000520062 ZNF665Q9H7R5 613 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms