RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 CXCR3P49682 368 aa13.01□□□□□ -0.33
PABPC1-208ENST00000519004 NDUFV1P49821 464 aa13.01□□□□□ -0.33
PABPC1-208ENST00000519004 STAT5BP51692 787 aa13.01□□□□□ -0.33
PABPC1-208ENST00000519004 AMHR2Q16671 573 aa13.01□□□□□ -0.33
PABPC1-208ENST00000519004 FAM26DQ5JW98 314 aa13.01□□□□□ -0.33
PABPC1-208ENST00000519004 CDKL4Q5MAI5 379 aa13.01□□□□□ -0.33
PABPC1-208ENST00000519004 OR10G2Q8NGC3 310 aa13.01□□□□□ -0.33
PABPC1-208ENST00000519004 AP3S1Q92572 193 aa13.01□□□□□ -0.33
PABPC1-208ENST00000519004 MS4A3Q96HJ5 214 aa13.01□□□□□ -0.33
PABPC1-208ENST00000519004 H2AFJQ9BTM1 129 aa13.01□□□□□ -0.33
PABPC1-208ENST00000519004 MED18Q9BUE0 208 aa13.01□□□□□ -0.33
PABPC1-208ENST00000519004 ERAP1Q9NZ08 941 aa13.01□□□□□ -0.33
PABPC1-208ENST00000519004 FBXL2Q9UKC9 423 aa13.01□□□□□ -0.33
PABPC1-208ENST00000519004 MGAT4BQ9UQ53 548 aa13.01□□□□□ -0.33
PABPC1-208ENST00000519004 DTX4Q9Y2E6 619 aa13.01□□□□□ -0.33
PABPC1-208ENST00000519004 POFUT2Q9Y2G5 429 aa13.01□□□□□ -0.33
PABPC1-208ENST00000519004 KCTD3Q9Y597 815 aa13.01□□□□□ -0.33
PABPC1-208ENST00000519004 SRCAPQ6ZRS2 3230 aa13.01□□□□□ -0.33
PABPC1-208ENST00000519004 LCHNA4D1U4 455 aa13.01□□□□□ -0.33
PABPC1-208ENST00000519004 TREHO43280 583 aa13.01□□□□□ -0.33
PABPC1-208ENST00000519004 DHFRP00374 187 aa13.01□□□□□ -0.33
PABPC1-208ENST00000519004 H2AFB1P0C5Y9 115 aa13.01□□□□□ -0.33
PABPC1-208ENST00000519004 H2AFB2P0C5Z0 115 aa13.01□□□□□ -0.33
PABPC1-208ENST00000519004 PTBP1P26599 531 aaKnown RBP eCLIP13.01□□□□□ -0.336e-18■□□□□ 8
PABPC1-208ENST00000519004 HLA-FP30511 346 aa13.01□□□□□ -0.33
PABPC1-208ENST00000519004 BTCP35070 178 aa13.01□□□□□ -0.33
PABPC1-208ENST00000519004 PBX3P40426 434 aa13.01□□□□□ -0.33
PABPC1-208ENST00000519004 EVX1P49640 407 aa13.01□□□□□ -0.33
PABPC1-208ENST00000519004 STK19P49842 368 aaPredicted RBP13.01□□□□□ -0.33
PABPC1-208ENST00000519004 MBTD1Q05BQ5 628 aa13.01□□□□□ -0.33
PABPC1-208ENST00000519004 DGKZQ13574 1117 aa13.01□□□□□ -0.33
PABPC1-208ENST00000519004 CCDC85BQ15834 202 aaPredicted RBP13.01□□□□□ -0.33
PABPC1-208ENST00000519004 OVOS1Q6IE37 1185 aa13.01□□□□□ -0.33
PABPC1-208ENST00000519004 DOK6Q6PKX4 331 aa13.01□□□□□ -0.33
PABPC1-208ENST00000519004 SUSD1Q6UWL2 747 aa13.01□□□□□ -0.33
PABPC1-208ENST00000519004 USP50Q70EL3 339 aaPredicted RBP13.01□□□□□ -0.33
PABPC1-208ENST00000519004 TSEN54Q7Z6J9 526 aaKnown RBP13.01□□□□□ -0.33
PABPC1-208ENST00000519004 PAQR7Q86WK9 346 aa13.01□□□□□ -0.33
PABPC1-208ENST00000519004 METTL23Q86XA0 190 aa13.01□□□□□ -0.33
PABPC1-208ENST00000519004 SYT14Q8NB59 555 aa13.01□□□□□ -0.33
PABPC1-208ENST00000519004 OR52P1PQ8NH57 321 aa13.01□□□□□ -0.33
PABPC1-208ENST00000519004 PPP3R2Q96LZ3 170 aa13.01□□□□□ -0.33
PABPC1-208ENST00000519004 POLR2J2Q9GZM3 115 aaKnown RBP13.01□□□□□ -0.33
PABPC1-208ENST00000519004 DBNDD1Q9H9R9 158 aa13.01□□□□□ -0.33
PABPC1-208ENST00000519004 ARNT2Q9HBZ2 717 aa13.01□□□□□ -0.33
PABPC1-208ENST00000519004 PURGQ9UJV8 347 aaKnown RBP13.01□□□□□ -0.33
PABPC1-208ENST00000519004 POMT2Q9UKY4 750 aa13.01□□□□□ -0.33
PABPC1-208ENST00000519004 ZFR2Q9UPR6 939 aaKnown RBP13.01□□□□□ -0.33
PABPC1-208ENST00000519004 SCN1AP35498 2009 aa13.01□□□□□ -0.33
PABPC1-208ENST00000519004 A0A1B0GVI7 797 aa13□□□□□ -0.33
PABPC1-208ENST00000519004 PDCD5O14737 125 aa13□□□□□ -0.33
PABPC1-208ENST00000519004 APOL3O95236 402 aa13□□□□□ -0.33
PABPC1-208ENST00000519004 HOXB8P17481 243 aaPredicted RBP13□□□□□ -0.33
PABPC1-208ENST00000519004 ATP12AP54707 1039 aa13□□□□□ -0.33
PABPC1-208ENST00000519004 MLLT11Q13015 90 aaPredicted RBP13□□□□□ -0.33
PABPC1-208ENST00000519004 PPIGQ13427 754 aaKnown RBP eCLIP13□□□□□ -0.331e-6■□□□□ 8.6
PABPC1-208ENST00000519004 ADAM15Q13444 863 aa13□□□□□ -0.33
PABPC1-208ENST00000519004 OPCMLQ14982 345 aa13□□□□□ -0.33
PABPC1-208ENST00000519004 VMACQ2NL98 169 aa13□□□□□ -0.33
PABPC1-208ENST00000519004 MILR1Q7Z6M3 343 aa13□□□□□ -0.33
PABPC1-208ENST00000519004 ANKRD46Q86W74 232 aa13□□□□□ -0.33
PABPC1-208ENST00000519004 ARHGAP12Q8IWW6 846 aa13□□□□□ -0.33
PABPC1-208ENST00000519004 PIAS4Q8N2W9 510 aaPredicted RBP13□□□□□ -0.33
PABPC1-208ENST00000519004 ATPAF2Q8N5M1 289 aa13□□□□□ -0.33
PABPC1-208ENST00000519004 BMPERQ8N8U9 685 aa13□□□□□ -0.33
PABPC1-208ENST00000519004 ATAD1Q8NBU5 361 aa13□□□□□ -0.33
PABPC1-208ENST00000519004 UXS1Q8NBZ7 420 aa13□□□□□ -0.33
PABPC1-208ENST00000519004 DNAJB8Q8NHS0 232 aa13□□□□□ -0.33
PABPC1-208ENST00000519004 MTFMTQ96DP5 389 aaKnown RBP13□□□□□ -0.33
PABPC1-208ENST00000519004 NELL2Q99435 816 aa13□□□□□ -0.33
PABPC1-208ENST00000519004 SLC25A19Q9HC21 320 aa13□□□□□ -0.33
PABPC1-208ENST00000519004 ATP13A1Q9HD20 1204 aa13□□□□□ -0.33
PABPC1-208ENST00000519004 CD93Q9NPY3 652 aa13□□□□□ -0.33
PABPC1-208ENST00000519004 DCAF16Q9NXF7 216 aa13□□□□□ -0.33
PABPC1-208ENST00000519004 MED16Q9Y2X0 877 aa13□□□□□ -0.33
PABPC1-208ENST00000519004 DOCK1Q14185 1865 aa13□□□□□ -0.33
PABPC1-208ENST00000519004 LOC285095A0A1B0GVY8 99 aa13□□□□□ -0.33
PABPC1-208ENST00000519004 G3V3G9 751 aa13□□□□□ -0.33
PABPC1-208ENST00000519004 AIPO00170 330 aa13□□□□□ -0.33
PABPC1-208ENST00000519004 TNFRSF11BO00300 401 aa13□□□□□ -0.33
PABPC1-208ENST00000519004 RGS11O94810 467 aa13□□□□□ -0.33
PABPC1-208ENST00000519004 FABP1P07148 127 aa13□□□□□ -0.33
PABPC1-208ENST00000519004 RHCEP18577 417 aa13□□□□□ -0.33
PABPC1-208ENST00000519004 CTBP2P56545 445 aa13□□□□□ -0.33
PABPC1-208ENST00000519004 KCNJ10P78508 379 aa13□□□□□ -0.33
PABPC1-208ENST00000519004 ARHGAP15Q53QZ3 475 aa13□□□□□ -0.33
PABPC1-208ENST00000519004 C3P1Q6ZMU1 363 aa13□□□□□ -0.33
PABPC1-208ENST00000519004 TMEM91Q6ZNR0 172 aa13□□□□□ -0.33
PABPC1-208ENST00000519004 NLRC3Q7RTR2 1065 aa13□□□□□ -0.33
PABPC1-208ENST00000519004 SERPINA11Q86U17 422 aa13□□□□□ -0.33
PABPC1-208ENST00000519004 FTMTQ8N4E7 242 aa13□□□□□ -0.33
PABPC1-208ENST00000519004 NSMAFQ92636 917 aa13□□□□□ -0.33
PABPC1-208ENST00000519004 TMEM203Q969S6 136 aa13□□□□□ -0.33
PABPC1-208ENST00000519004 SFXN2Q96NB2 322 aa13□□□□□ -0.33
PABPC1-208ENST00000519004 ERMAPQ96PL5 475 aaPredicted RBP13□□□□□ -0.33
PABPC1-208ENST00000519004 OR2M2Q96R28 347 aa13□□□□□ -0.33
PABPC1-208ENST00000519004 RNF19AQ9NV58 838 aa13□□□□□ -0.33
PABPC1-208ENST00000519004 SCP2D1Q9UJQ7 156 aa13□□□□□ -0.33
PABPC1-208ENST00000519004 GPR171O14626 319 aa12.99□□□□□ -0.33
PABPC1-208ENST00000519004 MAFKO60675 156 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms