RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 GPRIN3Q6ZVF9 776 aa20.72■□□□□ 0.91
VEGFA-217ENST00000518538 CCNYL1Q8N7R7 359 aa20.72■□□□□ 0.91
VEGFA-217ENST00000518538 PLPP5Q8NEB5 264 aa20.72■□□□□ 0.91
VEGFA-217ENST00000518538 ARMC2Q8NEN0 867 aa20.72■□□□□ 0.91
VEGFA-217ENST00000518538 ADAMTS18Q8TE60 1221 aa20.72■□□□□ 0.91
VEGFA-217ENST00000518538 RGMAQ96B86 450 aa20.72■□□□□ 0.91
VEGFA-217ENST00000518538 SLC25A18Q9H1K4 315 aa20.72■□□□□ 0.91
VEGFA-217ENST00000518538 GSTO2Q9H4Y5 243 aa20.72■□□□□ 0.91
VEGFA-217ENST00000518538 ELOVL6Q9H5J4 265 aa20.72■□□□□ 0.91
VEGFA-217ENST00000518538 ATP13A2Q9NQ11 1180 aa20.72■□□□□ 0.91
VEGFA-217ENST00000518538 SNX6Q9UNH7 406 aa20.72■□□□□ 0.91
VEGFA-217ENST00000518538 PCDHGA9Q9Y5G4 932 aaKnown RBP20.72■□□□□ 0.91
VEGFA-217ENST00000518538 NUP210LQ5VU65 1888 aa20.72■□□□□ 0.91
VEGFA-217ENST00000518538 ATMQ13315 3056 aa20.72■□□□□ 0.91
VEGFA-217ENST00000518538 CHD6Q8TD26 2715 aa20.72■□□□□ 0.91
VEGFA-217ENST00000518538 IGSF10Q6WRI0 2623 aa20.71■□□□□ 0.91
VEGFA-217ENST00000518538 IGHV1-45A0A0A0MS14 117 aa20.71■□□□□ 0.91
VEGFA-217ENST00000518538 OR2W5A6NFC9 320 aa20.71■□□□□ 0.91
VEGFA-217ENST00000518538 EIF4E1BA6NMX2 242 aaKnown RBP20.71■□□□□ 0.91
VEGFA-217ENST00000518538 SAP18O00422 153 aaKnown RBP20.71■□□□□ 0.91
VEGFA-217ENST00000518538 B4GALT2O60909 372 aa20.71■□□□□ 0.91
VEGFA-217ENST00000518538 SPAG7O75391 227 aa20.71■□□□□ 0.91
VEGFA-217ENST00000518538 COX6A1P12074 109 aa20.71■□□□□ 0.91
VEGFA-217ENST00000518538 HIST1H1TP22492 207 aaPredicted RBP20.71■□□□□ 0.91
VEGFA-217ENST00000518538 ATP5A1P25705 553 aaKnown RBP20.71■□□□□ 0.91
VEGFA-217ENST00000518538 NAGLUP54802 743 aa20.71■□□□□ 0.91
VEGFA-217ENST00000518538 PKNOX1P55347 436 aa20.71■□□□□ 0.91
VEGFA-217ENST00000518538 RAB38P57729 211 aa20.71■□□□□ 0.91
VEGFA-217ENST00000518538 EEF1A2Q05639 463 aaKnown RBP20.71■□□□□ 0.91
VEGFA-217ENST00000518538 AP5B1Q2VPB7 878 aa20.71■□□□□ 0.91
VEGFA-217ENST00000518538 LIPMQ5VYY2 423 aa20.71■□□□□ 0.91
VEGFA-217ENST00000518538 OR4C11Q6IEV9 310 aa20.71■□□□□ 0.91
VEGFA-217ENST00000518538 MTFMTQ96DP5 389 aaKnown RBP20.71■□□□□ 0.91
VEGFA-217ENST00000518538 FAM111AQ96PZ2 611 aa20.71■□□□□ 0.91
VEGFA-217ENST00000518538 SERPINI1Q99574 410 aa20.71■□□□□ 0.91
VEGFA-217ENST00000518538 SLC25A23Q9BV35 468 aa20.71■□□□□ 0.91
VEGFA-217ENST00000518538 SLC17A7Q9P2U7 560 aa20.71■□□□□ 0.91
VEGFA-217ENST00000518538 C19orf25Q9UFG5 118 aaPredicted RBP20.71■□□□□ 0.91
VEGFA-217ENST00000518538 DAPP1Q9UN19 280 aa20.71■□□□□ 0.91
VEGFA-217ENST00000518538 G3BP2Q9UN86 482 aaKnown RBP20.71■□□□□ 0.91
VEGFA-217ENST00000518538 MASP2O00187 686 aa20.7■□□□□ 0.9
VEGFA-217ENST00000518538 RTCAO00442 366 aaKnown RBP20.7■□□□□ 0.9
VEGFA-217ENST00000518538 PLPP1O14494 284 aa20.7■□□□□ 0.9
VEGFA-217ENST00000518538 CREB1P16220 341 aa20.7■□□□□ 0.9
VEGFA-217ENST00000518538 SSR2P43308 183 aa20.7■□□□□ 0.9
VEGFA-217ENST00000518538 LIM2P55344 173 aa20.7■□□□□ 0.9
VEGFA-217ENST00000518538 SOX8P57073 446 aa20.7■□□□□ 0.9
VEGFA-217ENST00000518538 RCN2Q14257 317 aa20.7■□□□□ 0.9
VEGFA-217ENST00000518538 PCLAFQ15004 111 aa20.7■□□□□ 0.9
VEGFA-217ENST00000518538 ABRAXAS2Q15018 415 aa20.7■□□□□ 0.9
VEGFA-217ENST00000518538 TCTN3Q6NUS6 607 aa20.7■□□□□ 0.9
VEGFA-217ENST00000518538 QSOX2Q6ZRP7 698 aa20.7■□□□□ 0.9
VEGFA-217ENST00000518538 FRMD7Q6ZUT3 714 aa20.7■□□□□ 0.9
VEGFA-217ENST00000518538 LANCL3Q6ZV70 420 aa20.7■□□□□ 0.9
VEGFA-217ENST00000518538 NDUFAF7Q7L592 441 aa20.7■□□□□ 0.9
VEGFA-217ENST00000518538 C10orf107Q8IVU9 208 aa20.7■□□□□ 0.9
VEGFA-217ENST00000518538 GALNT16Q8N428 558 aa20.7■□□□□ 0.9
VEGFA-217ENST00000518538 ACOT4Q8N9L9 421 aa20.7■□□□□ 0.9
VEGFA-217ENST00000518538 FDCSPQ8NFU4 85 aa20.7■□□□□ 0.9
VEGFA-217ENST00000518538 TCP10LQ8TDR4 215 aa20.7■□□□□ 0.9
VEGFA-217ENST00000518538 SLC29A3Q9BZD2 475 aa20.7■□□□□ 0.9
VEGFA-217ENST00000518538 ZNF700Q9H0M5 742 aa20.7■□□□□ 0.9
VEGFA-217ENST00000518538 LYRM4Q9HD34 91 aa20.7■□□□□ 0.9
VEGFA-217ENST00000518538 MLXIPLQ9NP71 852 aa20.7■□□□□ 0.9
VEGFA-217ENST00000518538 NSG1A0A0A6YYJ2 146 aa20.69■□□□□ 0.9
VEGFA-217ENST00000518538 A6NL46 340 aa20.69■□□□□ 0.9
VEGFA-217ENST00000518538 FAM227AF5H4B4 570 aa20.69■□□□□ 0.9
VEGFA-217ENST00000518538 TYROBPO43914 113 aa20.69■□□□□ 0.9
VEGFA-217ENST00000518538 PRMT3O60678 531 aa20.69■□□□□ 0.9
VEGFA-217ENST00000518538 SEMA3DO95025 777 aa20.69■□□□□ 0.9
VEGFA-217ENST00000518538 ETHE1O95571 254 aa20.69■□□□□ 0.9
VEGFA-217ENST00000518538 ESRRBO95718 433 aa20.69■□□□□ 0.9
VEGFA-217ENST00000518538 ENO1P06733 434 aaKnown RBP20.69■□□□□ 0.9
VEGFA-217ENST00000518538 PCOLCEQ15113 449 aa20.69■□□□□ 0.9
VEGFA-217ENST00000518538 NSDHLQ15738 373 aa20.69■□□□□ 0.9
VEGFA-217ENST00000518538 LACTB2Q53H82 288 aaPredicted RBP20.69■□□□□ 0.9
VEGFA-217ENST00000518538 TNFAIP8L3Q5GJ75 292 aa20.69■□□□□ 0.9
VEGFA-217ENST00000518538 CFAP157Q5JU67 520 aa20.69■□□□□ 0.9
VEGFA-217ENST00000518538 CPEB2Q7Z5Q1 589 aaKnown RBP20.69■□□□□ 0.9
VEGFA-217ENST00000518538 ANKRD37Q7Z713 158 aa20.69■□□□□ 0.9
VEGFA-217ENST00000518538 CDYL2Q8N8U2 506 aa20.69■□□□□ 0.9
VEGFA-217ENST00000518538 AGAP11Q8TF27 550 aa20.69■□□□□ 0.9
VEGFA-217ENST00000518538 SELENOMQ8WWX9 145 aa20.69■□□□□ 0.9
VEGFA-217ENST00000518538 PGM2Q96G03 612 aa20.69■□□□□ 0.9
VEGFA-217ENST00000518538 CENPHQ9H3R5 247 aa20.69■□□□□ 0.9
VEGFA-217ENST00000518538 ZNF160Q9HCG1 818 aa20.69■□□□□ 0.9
VEGFA-217ENST00000518538 PRDM9Q9NQV7 894 aa20.69■□□□□ 0.9
VEGFA-217ENST00000518538 RIC8BQ9NVN3 520 aa20.69■□□□□ 0.9
VEGFA-217ENST00000518538 GPR83Q9NYM4 423 aa20.69■□□□□ 0.9
VEGFA-217ENST00000518538 TP53TG5Q9Y2B4 290 aa20.69■□□□□ 0.9
VEGFA-217ENST00000518538 MMACHCQ9Y4U1 282 aa20.69■□□□□ 0.9
VEGFA-217ENST00000518538 H3BQF6 201 aa20.68■□□□□ 0.9
VEGFA-217ENST00000518538 CYR61O00622 381 aa20.68■□□□□ 0.9
VEGFA-217ENST00000518538 CTIFO43310 598 aaKnown RBP20.68■□□□□ 0.9
VEGFA-217ENST00000518538 KRT6AP02538 564 aa20.68■□□□□ 0.9
VEGFA-217ENST00000518538 KRT6BP04259 564 aa20.68■□□□□ 0.9
VEGFA-217ENST00000518538 PRB1P04280 392 aa20.68■□□□□ 0.9
VEGFA-217ENST00000518538 KRT6CP48668 564 aa20.68■□□□□ 0.9
VEGFA-217ENST00000518538 ASPHQ12797 758 aa20.68■□□□□ 0.9
VEGFA-217ENST00000518538 MYBPC3Q14896 1274 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms