RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 ASNA1O43681 348 aa17.55■□□□□ 0.4
SDC2-202ENST00000518385 CD36P16671 472 aa17.55■□□□□ 0.4
SDC2-202ENST00000518385 CLK1P49759 484 aaKnown RBP17.55■□□□□ 0.4
SDC2-202ENST00000518385 CLK3P49761 638 aaKnown RBP17.55■□□□□ 0.4
SDC2-202ENST00000518385 ITGA1P56199 1179 aa17.55■□□□□ 0.4
SDC2-202ENST00000518385 KCNJ8Q15842 424 aa17.55■□□□□ 0.4
SDC2-202ENST00000518385 CPSF6Q16630 551 aaKnown RBP eCLIP17.55■□□□□ 0.4
SDC2-202ENST00000518385 FRG2Q64ET8 278 aa17.55■□□□□ 0.4
SDC2-202ENST00000518385 KIAA1211LQ6NV74 962 aa17.55■□□□□ 0.4
SDC2-202ENST00000518385 EIF3MQ7L2H7 374 aaKnown RBP17.55■□□□□ 0.4
SDC2-202ENST00000518385 PAGE2Q7Z2X7 111 aa17.55■□□□□ 0.4
SDC2-202ENST00000518385 TMEM179BQ7Z7N9 219 aa17.55■□□□□ 0.4
SDC2-202ENST00000518385 HORMAD1Q86X24 394 aa17.55■□□□□ 0.4
SDC2-202ENST00000518385 TRAPPC5Q8IUR0 188 aa17.55■□□□□ 0.4
SDC2-202ENST00000518385 LYSMD2Q8IV50 215 aa17.55■□□□□ 0.4
SDC2-202ENST00000518385 C9orf43Q8TAL5 461 aaPredicted RBP17.55■□□□□ 0.4
SDC2-202ENST00000518385 CNIH3Q8TBE1 160 aa17.55■□□□□ 0.4
SDC2-202ENST00000518385 NETO1Q8TDF5 533 aa17.55■□□□□ 0.4
SDC2-202ENST00000518385 NELL1Q92832 810 aa17.55■□□□□ 0.4
SDC2-202ENST00000518385 CRELD1Q96HD1 420 aa17.55■□□□□ 0.4
SDC2-202ENST00000518385 FRG2BQ96QU4 278 aa17.55■□□□□ 0.4
SDC2-202ENST00000518385 RIBC2Q9H4K1 309 aa17.55■□□□□ 0.4
SDC2-202ENST00000518385 PRDM6Q9NQX0 595 aa17.55■□□□□ 0.4
SDC2-202ENST00000518385 ITM2CQ9NQX7 267 aa17.55■□□□□ 0.4
SDC2-202ENST00000518385 ENOPH1Q9UHY7 261 aa17.55■□□□□ 0.4
SDC2-202ENST00000518385 DUSP12Q9UNI6 340 aa17.55■□□□□ 0.4
SDC2-202ENST00000518385 PMF1-BGLAPU3KQ54 211 aa17.55■□□□□ 0.4
SDC2-202ENST00000518385 A0A1W2PQF6 199 aa17.54■□□□□ 0.4
SDC2-202ENST00000518385 LOC110117498-PIK3R3F6TDL0 507 aa17.54■□□□□ 0.4
SDC2-202ENST00000518385 MAN2B1O00754 1011 aa17.54■□□□□ 0.4
SDC2-202ENST00000518385 XPNPEP2O43895 674 aa17.54■□□□□ 0.4
SDC2-202ENST00000518385 POP7O75817 140 aaKnown RBP17.54■□□□□ 0.4
SDC2-202ENST00000518385 C1orf105O95561 183 aa17.54■□□□□ 0.4
SDC2-202ENST00000518385 PDYNP01213 254 aa17.54■□□□□ 0.4
SDC2-202ENST00000518385 S100A5P33763 92 aa17.54■□□□□ 0.4
SDC2-202ENST00000518385 DRD3P35462 400 aa17.54■□□□□ 0.4
SDC2-202ENST00000518385 SOX11P35716 441 aa17.54■□□□□ 0.4
SDC2-202ENST00000518385 TGFBR2P37173 567 aa17.54■□□□□ 0.4
SDC2-202ENST00000518385 PREPP48147 710 aa17.54■□□□□ 0.4
SDC2-202ENST00000518385 MASP1P48740 699 aa17.54■□□□□ 0.4
SDC2-202ENST00000518385 C21orf58P58505 322 aa17.54■□□□□ 0.4
SDC2-202ENST00000518385 IRF8Q02556 426 aa17.54■□□□□ 0.4
SDC2-202ENST00000518385 SRSF11Q05519 484 aaKnown RBP17.54■□□□□ 0.4
SDC2-202ENST00000518385 LRRC74AQ0VAA2 488 aa17.54■□□□□ 0.4
SDC2-202ENST00000518385 CHIT1Q13231 466 aa17.54■□□□□ 0.4
SDC2-202ENST00000518385 CCINQ13939 588 aa17.54■□□□□ 0.4
SDC2-202ENST00000518385 E2F2Q14209 437 aa17.54■□□□□ 0.4
SDC2-202ENST00000518385 STARD3Q14849 445 aa17.54■□□□□ 0.4
SDC2-202ENST00000518385 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.54■□□□□ 0.4
SDC2-202ENST00000518385 ZNF776Q68DI1 518 aaPredicted RBP17.54■□□□□ 0.4
SDC2-202ENST00000518385 UNC5DQ6UXZ4 953 aa17.54■□□□□ 0.4
SDC2-202ENST00000518385 BTLAQ7Z6A9 289 aa17.54■□□□□ 0.4
SDC2-202ENST00000518385 CYP4Z1Q86W10 505 aa17.54■□□□□ 0.4
SDC2-202ENST00000518385 CFAP206Q8IYR0 622 aa17.54■□□□□ 0.4
SDC2-202ENST00000518385 PIK3R3Q92569 461 aa17.54■□□□□ 0.4
SDC2-202ENST00000518385 DCSTAMPQ9H295 470 aa17.54■□□□□ 0.4
SDC2-202ENST00000518385 REEP1Q9H902 201 aa17.54■□□□□ 0.4
SDC2-202ENST00000518385 KRT84Q9NSB2 600 aa17.54■□□□□ 0.4
SDC2-202ENST00000518385 KIF17Q9P2E2 1029 aa17.54■□□□□ 0.4
SDC2-202ENST00000518385 UNC80Q8N2C7 3258 aa17.54■□□□□ 0.4
SDC2-202ENST00000518385 H0YIV9 168 aa17.53■□□□□ 0.4
SDC2-202ENST00000518385 K7ESM1 405 aa17.53■□□□□ 0.4
SDC2-202ENST00000518385 MID1O15344 667 aa17.53■□□□□ 0.4
SDC2-202ENST00000518385 DYRK3O43781 588 aa17.53■□□□□ 0.4
SDC2-202ENST00000518385 MED26O95402 600 aa17.53■□□□□ 0.4
SDC2-202ENST00000518385 C9P02748 559 aa17.53■□□□□ 0.4
SDC2-202ENST00000518385 BCKDHAP12694 445 aa17.53■□□□□ 0.4
SDC2-202ENST00000518385 DAPP51397 102 aa17.53■□□□□ 0.4
SDC2-202ENST00000518385 VBP1P61758 197 aa17.53■□□□□ 0.4
SDC2-202ENST00000518385 PIGFQ07326 219 aa17.53■□□□□ 0.4
SDC2-202ENST00000518385 SELENBP1Q13228 472 aa17.53■□□□□ 0.4
SDC2-202ENST00000518385 LAPTM5Q13571 262 aa17.53■□□□□ 0.4
SDC2-202ENST00000518385 ELOAQ14241 798 aaKnown RBP17.53■□□□□ 0.4
SDC2-202ENST00000518385 PTGR1Q14914 329 aa17.53■□□□□ 0.4
SDC2-202ENST00000518385 MLF2Q15773 248 aaPredicted RBP17.53■□□□□ 0.4
SDC2-202ENST00000518385 TIMM50Q3ZCQ8 353 aa17.53■□□□□ 0.4
SDC2-202ENST00000518385 AGBL4Q5VU57 503 aa17.53■□□□□ 0.4
SDC2-202ENST00000518385 GRHL2Q6ISB3 625 aa17.53■□□□□ 0.4
SDC2-202ENST00000518385 HS3ST5Q8IZT8 346 aa17.53■□□□□ 0.4
SDC2-202ENST00000518385 MAFAQ8NHW3 353 aaPredicted RBP17.53■□□□□ 0.4
SDC2-202ENST00000518385 PROX1Q92786 737 aa17.53■□□□□ 0.4
SDC2-202ENST00000518385 HRASLS5Q96KN8 279 aa17.53■□□□□ 0.4
SDC2-202ENST00000518385 PKP4Q99569 1192 aa17.53■□□□□ 0.4
SDC2-202ENST00000518385 TBCDQ9BTW9 1192 aa17.53■□□□□ 0.4
SDC2-202ENST00000518385 ACPTQ9BZG2 426 aa17.53■□□□□ 0.4
SDC2-202ENST00000518385 ATG10Q9H0Y0 220 aa17.53■□□□□ 0.4
SDC2-202ENST00000518385 IKZF5Q9H5V7 419 aa17.53■□□□□ 0.4
SDC2-202ENST00000518385 SERHLQ9NQF3 203 aa17.53■□□□□ 0.4
SDC2-202ENST00000518385 FARSBQ9NSD9 589 aaKnown RBP17.53■□□□□ 0.4
SDC2-202ENST00000518385 GULP1Q9UBP9 304 aa17.53■□□□□ 0.4
SDC2-202ENST00000518385 KCNE2Q9Y6J6 123 aa17.53■□□□□ 0.4
SDC2-202ENST00000518385 APOA1P02647 267 aa17.53■□□□□ 0.4
SDC2-202ENST00000518385 HOXB2P14652 356 aa17.53■□□□□ 0.4
SDC2-202ENST00000518385 ZNF8P17098 575 aaPredicted RBP17.53■□□□□ 0.4
SDC2-202ENST00000518385 COL9A1P20849 921 aa17.53■□□□□ 0.4
SDC2-202ENST00000518385 CD72P21854 359 aa17.53■□□□□ 0.4
SDC2-202ENST00000518385 ITPKAP23677 461 aa17.53■□□□□ 0.4
SDC2-202ENST00000518385 FMO3P31513 532 aa17.53■□□□□ 0.4
SDC2-202ENST00000518385 CTSKP43235 329 aa17.53■□□□□ 0.4
SDC2-202ENST00000518385 HMGCS1Q01581 520 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms