RNA–Protein interactions for RNA: ENST00000517251.1

SCARNA20.6-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 106 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.6-201ENST00000517251 RBBP4Q09028 425 aa3.1□□□□□ -1.91
SCARNA20.6-201ENST00000517251 TMEM115Q12893 351 aaPredicted RBP3.1□□□□□ -1.91
SCARNA20.6-201ENST00000517251 NPRL3Q12980 569 aa3.1□□□□□ -1.91
SCARNA20.6-201ENST00000517251 PPIGQ13427 754 aaKnown RBP eCLIP3.1□□□□□ -1.91
SCARNA20.6-201ENST00000517251 TOP3AQ13472 1001 aaPredicted RBP3.1□□□□□ -1.91
SCARNA20.6-201ENST00000517251 DDX39BQ13838 428 aaKnown RBP3.1□□□□□ -1.91
SCARNA20.6-201ENST00000517251 SCARB2Q14108 478 aa3.1□□□□□ -1.91
SCARNA20.6-201ENST00000517251 SPIDRQ14159 915 aa3.1□□□□□ -1.91
SCARNA20.6-201ENST00000517251 ELAVL3Q14576 367 aaKnown RBP3.1□□□□□ -1.91
SCARNA20.6-201ENST00000517251 ZNF234Q14588 700 aa3.1□□□□□ -1.91
SCARNA20.6-201ENST00000517251 PUM1Q14671 1186 aaKnown RBP eCLIP3.1□□□□□ -1.91
SCARNA20.6-201ENST00000517251 OXA1LQ15070 435 aa3.1□□□□□ -1.91
SCARNA20.6-201ENST00000517251 SEC23BQ15437 767 aa3.1□□□□□ -1.91
SCARNA20.6-201ENST00000517251 TEAD4Q15561 434 aa3.1□□□□□ -1.91
SCARNA20.6-201ENST00000517251 NPTX1Q15818 432 aa3.1□□□□□ -1.91
SCARNA20.6-201ENST00000517251 SSX1Q16384 188 aa3.1□□□□□ -1.91
SCARNA20.6-201ENST00000517251 MOGQ16653 247 aa3.1□□□□□ -1.91
SCARNA20.6-201ENST00000517251 CYP2A13Q16696 494 aa3.1□□□□□ -1.91
SCARNA20.6-201ENST00000517251 SLC5A12Q1EHB4 618 aa3.1□□□□□ -1.91
SCARNA20.6-201ENST00000517251 EXOC3L2Q2M3D2 409 aa3.1□□□□□ -1.91
SCARNA20.6-201ENST00000517251 ZNF284Q2VY69 593 aa3.1□□□□□ -1.91
SCARNA20.6-201ENST00000517251 PGS1Q32NB8 556 aa3.1□□□□□ -1.91
SCARNA20.6-201ENST00000517251 ZNF829Q3KNS6 432 aaPredicted RBP3.1□□□□□ -1.91
SCARNA20.6-201ENST00000517251 FLYWCH1Q4VC44 716 aa3.1□□□□□ -1.91
SCARNA20.6-201ENST00000517251 SYTL3Q4VX76 610 aa3.1□□□□□ -1.91
SCARNA20.6-201ENST00000517251 RPS26P11Q5JNZ5 115 aaPredicted RBP3.1□□□□□ -1.91
SCARNA20.6-201ENST00000517251 EXOSC6Q5RKV6 272 aaKnown RBP3.1□□□□□ -1.91
SCARNA20.6-201ENST00000517251 TMEM240Q5SV17 173 aa3.1□□□□□ -1.91
SCARNA20.6-201ENST00000517251 PRAMEF14Q5SWL7 426 aa3.1□□□□□ -1.91
SCARNA20.6-201ENST00000517251 SPOUT1Q5T280 376 aaKnown RBP3.1□□□□□ -1.91
SCARNA20.6-201ENST00000517251 GCNT6Q5T4J0 391 aa3.1□□□□□ -1.91
SCARNA20.6-201ENST00000517251 PRAMEF13Q5VWM6 474 aa3.1□□□□□ -1.91
SCARNA20.6-201ENST00000517251 KIAA1614Q5VZ46 1190 aa3.1□□□□□ -1.91
SCARNA20.6-201ENST00000517251 TMEM236Q5W0B7 351 aa3.1□□□□□ -1.91
SCARNA20.6-201ENST00000517251 C12orf73Q69YU5 71 aa3.1□□□□□ -1.91
SCARNA20.6-201ENST00000517251 FAM109BQ6ICB4 259 aaPredicted RBP3.1□□□□□ -1.91
SCARNA20.6-201ENST00000517251 MRM1Q6IN84 353 aaKnown RBP3.1□□□□□ -1.91
SCARNA20.6-201ENST00000517251 KIAA1161Q6NSJ0 714 aa3.1□□□□□ -1.91
SCARNA20.6-201ENST00000517251 ZCCHC8Q6NZY4 707 aaKnown RBP3.1□□□□□ -1.91
SCARNA20.6-201ENST00000517251 ERAP2Q6P179 960 aa3.1□□□□□ -1.91
SCARNA20.6-201ENST00000517251 MED27Q6P2C8 311 aa3.1□□□□□ -1.91
SCARNA20.6-201ENST00000517251 TMEM220Q6QAJ8 160 aa3.1□□□□□ -1.91
SCARNA20.6-201ENST00000517251 KLHL17Q6TDP4 642 aa3.1□□□□□ -1.91
SCARNA20.6-201ENST00000517251 CRTC3Q6UUV7 619 aa3.1□□□□□ -1.91
SCARNA20.6-201ENST00000517251 NXPE4Q6UWF7 544 aa3.1□□□□□ -1.91
SCARNA20.6-201ENST00000517251 SLC46A3Q7Z3Q1 461 aa3.1□□□□□ -1.91
SCARNA20.6-201ENST00000517251 GRASPQ7Z6J2 395 aaPredicted RBP3.1□□□□□ -1.91
SCARNA20.6-201ENST00000517251 SLC9B2Q86UD5 537 aa3.1□□□□□ -1.91
SCARNA20.6-201ENST00000517251 P2RY8Q86VZ1 359 aa3.1□□□□□ -1.91
SCARNA20.6-201ENST00000517251 HEATR4Q86WZ0 1026 aa3.1□□□□□ -1.91
SCARNA20.6-201ENST00000517251 LSRQ86X29 649 aaPredicted RBP3.1□□□□□ -1.91
SCARNA20.6-201ENST00000517251 SNX29P2Q8IUI4 249 aa3.1□□□□□ -1.91
SCARNA20.6-201ENST00000517251 LACC1Q8IV20 430 aa3.1□□□□□ -1.91
SCARNA20.6-201ENST00000517251 DCUN1D3Q8IWE4 304 aa3.1□□□□□ -1.91
SCARNA20.6-201ENST00000517251 NLGN4XQ8N0W4 816 aa3.1□□□□□ -1.91
SCARNA20.6-201ENST00000517251 LGI4Q8N135 537 aa3.1□□□□□ -1.91
SCARNA20.6-201ENST00000517251 NAGSQ8N159 534 aa3.1□□□□□ -1.91
SCARNA20.6-201ENST00000517251 CENPSQ8N2Z9 138 aa3.1□□□□□ -1.91
SCARNA20.6-201ENST00000517251 SLC5A8Q8N695 610 aa3.1□□□□□ -1.91
SCARNA20.6-201ENST00000517251 HORMAD2Q8N7B1 307 aa3.1□□□□□ -1.91
SCARNA20.6-201ENST00000517251 AMER3Q8N944 861 aa3.1□□□□□ -1.91
SCARNA20.6-201ENST00000517251 MRPL43Q8N983 215 aaKnown RBP3.1□□□□□ -1.91
SCARNA20.6-201ENST00000517251 TTC29Q8NA56 475 aaPredicted RBP3.1□□□□□ -1.91
SCARNA20.6-201ENST00000517251 C11orf65Q8NCR3 313 aa3.1□□□□□ -1.91
SCARNA20.6-201ENST00000517251 SETD9Q8NE22 299 aa3.1□□□□□ -1.91
SCARNA20.6-201ENST00000517251 GPR156Q8NFN8 814 aa3.1□□□□□ -1.91
SCARNA20.6-201ENST00000517251 OR10G2Q8NGC3 310 aa3.1□□□□□ -1.91
SCARNA20.6-201ENST00000517251 OR4K1Q8NGD4 311 aa3.1□□□□□ -1.91
SCARNA20.6-201ENST00000517251 OR4A15Q8NGL6 344 aa3.1□□□□□ -1.91
SCARNA20.6-201ENST00000517251 OR5AR1Q8NGP9 310 aa3.1□□□□□ -1.91
SCARNA20.6-201ENST00000517251 OR9A1PQ8NGU1 263 aa3.1□□□□□ -1.91
SCARNA20.6-201ENST00000517251 OR2L2Q8NH16 312 aa3.1□□□□□ -1.91
SCARNA20.6-201ENST00000517251 OR5AK3PQ8NH89 298 aa3.1□□□□□ -1.91
SCARNA20.6-201ENST00000517251 RHOXF1Q8NHV9 184 aa3.1□□□□□ -1.91
SCARNA20.6-201ENST00000517251 NFKBIDQ8NI38 313 aa3.1□□□□□ -1.91
SCARNA20.6-201ENST00000517251 SUN3Q8TAQ9 357 aa3.1□□□□□ -1.91
SCARNA20.6-201ENST00000517251 CREB3L4Q8TEY5 395 aa3.1□□□□□ -1.91
SCARNA20.6-201ENST00000517251 SLC5A11Q8WWX8 675 aa3.1□□□□□ -1.91
SCARNA20.6-201ENST00000517251 GEMIN6Q8WXD5 167 aaKnown RBP3.1□□□□□ -1.91
SCARNA20.6-201ENST00000517251 ATL1Q8WXF7 558 aa3.1□□□□□ -1.91
SCARNA20.6-201ENST00000517251 KLHL6Q8WZ60 621 aa3.1□□□□□ -1.91
SCARNA20.6-201ENST00000517251 LZICQ8WZA0 190 aa3.1□□□□□ -1.91
SCARNA20.6-201ENST00000517251 UBE2FQ969M7 185 aa3.1□□□□□ -1.91
SCARNA20.6-201ENST00000517251 TMEM159Q96B96 161 aa3.1□□□□□ -1.91
SCARNA20.6-201ENST00000517251 AP2M1Q96CW1 435 aa3.1□□□□□ -1.91
SCARNA20.6-201ENST00000517251 MTERF3Q96E29 417 aa3.1□□□□□ -1.91
SCARNA20.6-201ENST00000517251 NEURL3Q96EH8 262 aa3.1□□□□□ -1.91
SCARNA20.6-201ENST00000517251 TRMT61AQ96FX7 289 aaKnown RBP3.1□□□□□ -1.91
SCARNA20.6-201ENST00000517251 MED8Q96G25 268 aa3.1□□□□□ -1.91
SCARNA20.6-201ENST00000517251 VMP1Q96GC9 406 aa3.1□□□□□ -1.91
SCARNA20.6-201ENST00000517251 PDXPQ96GD0 296 aa3.1□□□□□ -1.91
SCARNA20.6-201ENST00000517251 SH3YL1Q96HL8 342 aaPredicted RBP3.1□□□□□ -1.91
SCARNA20.6-201ENST00000517251 ASB16Q96NS5 453 aa3.1□□□□□ -1.91
SCARNA20.6-201ENST00000517251 TEFMQ96QE5 360 aaKnown RBP3.1□□□□□ -1.91
SCARNA20.6-201ENST00000517251 NODALQ96S42 347 aa3.1□□□□□ -1.91
SCARNA20.6-201ENST00000517251 FAM129BQ96TA1 746 aa3.1□□□□□ -1.91
SCARNA20.6-201ENST00000517251 SDHCQ99643 169 aaPredicted RBP3.1□□□□□ -1.91
SCARNA20.6-201ENST00000517251 NIPSNAP1Q9BPW8 284 aa3.1□□□□□ -1.91
SCARNA20.6-201ENST00000517251 NEURL2Q9BR09 285 aa3.1□□□□□ -1.91
SCARNA20.6-201ENST00000517251 SLC35A5Q9BS91 424 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms