RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 SERPINB6P35237 376 aa2.85□□□□□ -1.95
HERC4-215ENST00000515753 CDX1P47902 265 aaPredicted RBP2.85□□□□□ -1.95
HERC4-215ENST00000515753 SERPINH1P50454 418 aaKnown RBP2.85□□□□□ -1.95
HERC4-215ENST00000515753 MAPK12P53778 367 aa2.85□□□□□ -1.95
HERC4-215ENST00000515753 HMGN5P82970 282 aaKnown RBP2.85□□□□□ -1.95
HERC4-215ENST00000515753 FOLH1Q04609 750 aa2.85□□□□□ -1.95
HERC4-215ENST00000515753 DPYSQ14117 519 aa2.85□□□□□ -1.95
HERC4-215ENST00000515753 TAF13Q15543 124 aa2.85□□□□□ -1.95
HERC4-215ENST00000515753 TEAD2Q15562 447 aa2.85□□□□□ -1.95
HERC4-215ENST00000515753 STXBP2Q15833 593 aa2.85□□□□□ -1.95
HERC4-215ENST00000515753 SLC15A2Q16348 729 aa2.85□□□□□ -1.95
HERC4-215ENST00000515753 UGP2Q16851 508 aa2.85□□□□□ -1.95
HERC4-215ENST00000515753 LBHQ53QV2 105 aaPredicted RBP2.85□□□□□ -1.95
HERC4-215ENST00000515753 FASTKD1Q53R41 847 aaKnown RBP2.85□□□□□ -1.95
HERC4-215ENST00000515753 KCTD11Q693B1 232 aa2.85□□□□□ -1.95
HERC4-215ENST00000515753 FAAP20Q6NZ36 180 aa2.85□□□□□ -1.95
HERC4-215ENST00000515753 TMPRSS11FQ6ZWK6 438 aa2.85□□□□□ -1.95
HERC4-215ENST00000515753 TMEM110Q86TL2 294 aa2.85□□□□□ -1.95
HERC4-215ENST00000515753 SERPINA12Q8IW75 414 aa2.85□□□□□ -1.95
HERC4-215ENST00000515753 KLHDC8AQ8IYD2 350 aa2.85□□□□□ -1.95
HERC4-215ENST00000515753 CFAP206Q8IYR0 622 aa2.85□□□□□ -1.95
HERC4-215ENST00000515753 MARVELD2Q8N4S9 558 aa2.85□□□□□ -1.95
HERC4-215ENST00000515753 ZNF248Q8NDW4 579 aa2.85□□□□□ -1.95
HERC4-215ENST00000515753 DDHD1Q8NEL9 900 aa2.85□□□□□ -1.95
HERC4-215ENST00000515753 HCAR2Q8TDS4 363 aa2.85□□□□□ -1.95
HERC4-215ENST00000515753 RNF128Q8TEB7 428 aa2.85□□□□□ -1.95
HERC4-215ENST00000515753 SYN2Q92777 582 aaPredicted RBP2.85□□□□□ -1.95
HERC4-215ENST00000515753 SGF29Q96ES7 293 aa2.85□□□□□ -1.95
HERC4-215ENST00000515753 CDKN2AIPNLQ96HQ2 116 aa2.85□□□□□ -1.95
HERC4-215ENST00000515753 NSMCE2Q96MF7 247 aa2.85□□□□□ -1.95
HERC4-215ENST00000515753 OPRPNQ99935 248 aaPredicted RBP2.85□□□□□ -1.95
HERC4-215ENST00000515753 TSPYL1Q9H0U9 437 aa2.85□□□□□ -1.95
HERC4-215ENST00000515753 S1PR5Q9H228 398 aa2.85□□□□□ -1.95
HERC4-215ENST00000515753 DPH5Q9H2P9 285 aa2.85□□□□□ -1.95
HERC4-215ENST00000515753 FGF22Q9HCT0 170 aa2.85□□□□□ -1.95
HERC4-215ENST00000515753 PPANQ9NQ55 473 aaKnown RBP2.85□□□□□ -1.95
HERC4-215ENST00000515753 SLC35D1Q9NTN3 355 aa2.85□□□□□ -1.95
HERC4-215ENST00000515753 P4HTMQ9NXG6 502 aa2.85□□□□□ -1.95
HERC4-215ENST00000515753 BARHL2Q9NY43 387 aa2.85□□□□□ -1.95
HERC4-215ENST00000515753 SPHK1Q9NYA1 384 aa2.85□□□□□ -1.95
HERC4-215ENST00000515753 SPASTQ9UBP0 616 aa2.85□□□□□ -1.95
HERC4-215ENST00000515753 KCNN3Q9UGI6 736 aa2.85□□□□□ -1.95
HERC4-215ENST00000515753 RNF150Q9ULK6 438 aa2.85□□□□□ -1.95
HERC4-215ENST00000515753 RRP15Q9Y3B9 282 aaKnown RBP2.85□□□□□ -1.95
HERC4-215ENST00000515753 EVC2Q86UK5 1308 aa2.85□□□□□ -1.95
HERC4-215ENST00000515753 TTC21AQ8NDW8 1320 aa2.85□□□□□ -1.95
HERC4-215ENST00000515753 STK36Q9NRP7 1315 aa2.85□□□□□ -1.95
HERC4-215ENST00000515753 E9PCH4 1651 aa2.85□□□□□ -1.95
HERC4-215ENST00000515753 POLR3AO14802 1390 aaPredicted RBP2.85□□□□□ -1.95
HERC4-215ENST00000515753 CCDC7Q96M83 1385 aa2.85□□□□□ -1.95
HERC4-215ENST00000515753 OVOS2A0A0G2JMS6 1433 aa2.85□□□□□ -1.95
HERC4-215ENST00000515753 OVOS2A0A0J9YW53 1432 aa2.85□□□□□ -1.95
HERC4-215ENST00000515753 OVOS2Q6IE36 1432 aa2.85□□□□□ -1.95
HERC4-215ENST00000515753 SSH2Q76I76 1423 aa2.85□□□□□ -1.95
HERC4-215ENST00000515753 XIRP1Q702N8 1843 aaKnown RBP2.84□□□□□ -1.95
HERC4-215ENST00000515753 NRXN3Q9Y4C0 1643 aa2.84□□□□□ -1.95
HERC4-215ENST00000515753 LOC101059948A0A1B0GTJ6 334 aa2.84□□□□□ -1.95
HERC4-215ENST00000515753 C2orf92A0A1B0GVN3 265 aa2.84□□□□□ -1.95
HERC4-215ENST00000515753 CFAP73A6NFT4 308 aa2.84□□□□□ -1.95
HERC4-215ENST00000515753 KPNA7A9QM74 516 aa2.84□□□□□ -1.95
HERC4-215ENST00000515753 GAPDHSO14556 408 aaPredicted RBP2.84□□□□□ -1.95
HERC4-215ENST00000515753 ANGPT2O15123 496 aa2.84□□□□□ -1.95
HERC4-215ENST00000515753 HSF2BPO75031 334 aa2.84□□□□□ -1.95
HERC4-215ENST00000515753 ATP9AO75110 1047 aa2.84□□□□□ -1.95
HERC4-215ENST00000515753 CRLF1O75462 422 aa2.84□□□□□ -1.95
HERC4-215ENST00000515753 KHDRBS3O75525 346 aaKnown RBP2.84□□□□□ -1.95
HERC4-215ENST00000515753 PRKRAO75569 313 aaKnown RBP2.84□□□□□ -1.95
HERC4-215ENST00000515753 ZFAND5O76080 213 aa2.84□□□□□ -1.95
HERC4-215ENST00000515753 MT-ATP6P00846 226 aa2.84□□□□□ -1.95
HERC4-215ENST00000515753 IFNB1P01574 187 aa2.84□□□□□ -1.95
HERC4-215ENST00000515753 SERPING1P05155 500 aa2.84□□□□□ -1.95
HERC4-215ENST00000515753 SBK2P0C263 348 aa2.84□□□□□ -1.95
HERC4-215ENST00000515753 LBPP18428 481 aa2.84□□□□□ -1.95
HERC4-215ENST00000515753 CA4P22748 312 aa2.84□□□□□ -1.95
HERC4-215ENST00000515753 ACP1P24666 158 aa2.84□□□□□ -1.95
HERC4-215ENST00000515753 MPZP25189 248 aa2.84□□□□□ -1.95
HERC4-215ENST00000515753 PSMB4P28070 264 aa2.84□□□□□ -1.95
HERC4-215ENST00000515753 CEACAM8P31997 349 aaPredicted RBP2.84□□□□□ -1.95
HERC4-215ENST00000515753 RPL21P46778 160 aaKnown RBP2.84□□□□□ -1.95
HERC4-215ENST00000515753 NOVP48745 357 aa2.84□□□□□ -1.95
HERC4-215ENST00000515753 MTCP1P56278 107 aa2.84□□□□□ -1.95
HERC4-215ENST00000515753 C1QTNF8P60827 252 aa2.84□□□□□ -1.95
HERC4-215ENST00000515753 PRKCEQ02156 737 aa2.84□□□□□ -1.95
HERC4-215ENST00000515753 NPTX1Q15818 432 aa2.84□□□□□ -1.95
HERC4-215ENST00000515753 CCDC40Q4G0X9 1142 aa2.84□□□□□ -1.95
HERC4-215ENST00000515753 ADAMTSL4-AS1Q5T5F5 129 aa2.84□□□□□ -1.95
HERC4-215ENST00000515753 CES4AQ5XG92 561 aa2.84□□□□□ -1.95
HERC4-215ENST00000515753 CYB5D1Q6P9G0 228 aa2.84□□□□□ -1.95
HERC4-215ENST00000515753 PODNL1Q6PEZ8 512 aa2.84□□□□□ -1.95
HERC4-215ENST00000515753 CORO6Q6QEF8 472 aa2.84□□□□□ -1.95
HERC4-215ENST00000515753 C1orf186Q6ZWK4 172 aa2.84□□□□□ -1.95
HERC4-215ENST00000515753 SYVN1Q86TM6 617 aa2.84□□□□□ -1.95
HERC4-215ENST00000515753 AMIGO1Q86WK6 493 aa2.84□□□□□ -1.95
HERC4-215ENST00000515753 MAPK1IP1LQ8NDC0 245 aa2.84□□□□□ -1.95
HERC4-215ENST00000515753 OR52E1Q8NGJ3 308 aa2.84□□□□□ -1.95
HERC4-215ENST00000515753 OLIG1Q8TAK6 271 aa2.84□□□□□ -1.95
HERC4-215ENST00000515753 DYRK2Q92630 601 aa2.84□□□□□ -1.95
HERC4-215ENST00000515753 MRPL38Q96DV4 380 aaKnown RBP2.84□□□□□ -1.95
HERC4-215ENST00000515753 SAMD8Q96LT4 415 aa2.84□□□□□ -1.95
HERC4-215ENST00000515753 ZNF560Q96MR9 790 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms