RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 MEX3AA1L020 520 aaKnown RBP7.19□□□□□ -1.26
PDLIM5-219ENST00000514743 MEIOCA2RUB1 952 aa7.19□□□□□ -1.26
PDLIM5-219ENST00000514743 TCAF2A6NFQ2 919 aa7.19□□□□□ -1.26
PDLIM5-219ENST00000514743 UBFD1O14562 309 aaKnown RBP7.19□□□□□ -1.26
PDLIM5-219ENST00000514743 SIGLEC6O43699 453 aa7.19□□□□□ -1.26
PDLIM5-219ENST00000514743 ADRB1P08588 477 aa7.19□□□□□ -1.26
PDLIM5-219ENST00000514743 HCKP08631 526 aa7.19□□□□□ -1.26
PDLIM5-219ENST00000514743 HNF1AP20823 631 aa7.19□□□□□ -1.26
PDLIM5-219ENST00000514743 YWHAQP27348 245 aa7.19□□□□□ -1.26
PDLIM5-219ENST00000514743 MPIP34949 423 aa7.19□□□□□ -1.26
PDLIM5-219ENST00000514743 DHPSP49366 369 aaPredicted RBP7.19□□□□□ -1.26
PDLIM5-219ENST00000514743 CDH4P55283 916 aa7.19□□□□□ -1.26
PDLIM5-219ENST00000514743 IL10RBQ08334 325 aa7.19□□□□□ -1.26
PDLIM5-219ENST00000514743 PRKG2Q13237 762 aa7.19□□□□□ -1.26
PDLIM5-219ENST00000514743 IKBKEQ14164 716 aa7.19□□□□□ -1.26
PDLIM5-219ENST00000514743 PTPRCAPQ14761 206 aa7.19□□□□□ -1.26
PDLIM5-219ENST00000514743 SLC9A5Q14940 896 aa7.19□□□□□ -1.26
PDLIM5-219ENST00000514743 GPR33Q49SQ1 333 aa7.19□□□□□ -1.26
PDLIM5-219ENST00000514743 CTXN3Q4LDR2 81 aa7.19□□□□□ -1.26
PDLIM5-219ENST00000514743 PIGGQ5H8A4 983 aa7.19□□□□□ -1.26
PDLIM5-219ENST00000514743 OGFOD3Q6PK18 319 aa7.19□□□□□ -1.26
PDLIM5-219ENST00000514743 PIWIL4Q7Z3Z4 852 aaKnown RBP7.19□□□□□ -1.26
PDLIM5-219ENST00000514743 RAB44Q7Z6P3 723 aaPredicted RBP7.19□□□□□ -1.26
PDLIM5-219ENST00000514743 PIM3Q86V86 326 aa7.19□□□□□ -1.26
PDLIM5-219ENST00000514743 TMEM126BQ8IUX1 230 aa7.19□□□□□ -1.26
PDLIM5-219ENST00000514743 CRIPAKQ8N1N5 446 aa7.19□□□□□ -1.26
PDLIM5-219ENST00000514743 PCDH20Q8N6Y1 951 aaKnown RBP7.19□□□□□ -1.26
PDLIM5-219ENST00000514743 CEP76Q8TAP6 659 aa7.19□□□□□ -1.26
PDLIM5-219ENST00000514743 FBXO32Q969P5 355 aa7.19□□□□□ -1.26
PDLIM5-219ENST00000514743 RCN3Q96D15 328 aa7.19□□□□□ -1.26
PDLIM5-219ENST00000514743 BSCL2Q96G97 398 aaPredicted RBP7.19□□□□□ -1.26
PDLIM5-219ENST00000514743 C5orf34Q96MH7 638 aa7.19□□□□□ -1.26
PDLIM5-219ENST00000514743 LINC00052Q96N35 136 aa7.19□□□□□ -1.26
PDLIM5-219ENST00000514743 NECTIN4Q96NY8 510 aa7.19□□□□□ -1.26
PDLIM5-219ENST00000514743 CASD1Q96PB1 797 aa7.19□□□□□ -1.26
PDLIM5-219ENST00000514743 SHARPINQ9H0F6 387 aa7.19□□□□□ -1.26
PDLIM5-219ENST00000514743 METTL9Q9H1A3 318 aa7.19□□□□□ -1.26
PDLIM5-219ENST00000514743 GSTO2Q9H4Y5 243 aa7.19□□□□□ -1.26
PDLIM5-219ENST00000514743 IL1RAPQ9NPH3 570 aa7.19□□□□□ -1.26
PDLIM5-219ENST00000514743 SLAMF7Q9NQ25 335 aa7.19□□□□□ -1.26
PDLIM5-219ENST00000514743 SDHAF2Q9NX18 166 aa7.19□□□□□ -1.26
PDLIM5-219ENST00000514743 RDH8Q9NYR8 311 aa7.19□□□□□ -1.26
PDLIM5-219ENST00000514743 TAS2R9Q9NYW1 312 aa7.19□□□□□ -1.26
PDLIM5-219ENST00000514743 H2AFY2Q9P0M6 372 aaPredicted RBP7.19□□□□□ -1.26
PDLIM5-219ENST00000514743 PISDQ9UG56 409 aa7.19□□□□□ -1.26
PDLIM5-219ENST00000514743 BTNL2Q9UIR0 455 aa7.19□□□□□ -1.26
PDLIM5-219ENST00000514743 CA14Q9ULX7 337 aa7.19□□□□□ -1.26
PDLIM5-219ENST00000514743 FAM50BQ9Y247 325 aa7.19□□□□□ -1.26
PDLIM5-219ENST00000514743 NAALAD2Q9Y3Q0 740 aa7.19□□□□□ -1.26
PDLIM5-219ENST00000514743 PEX16Q9Y5Y5 336 aa7.19□□□□□ -1.26
PDLIM5-219ENST00000514743 ALG5Q9Y673 324 aa7.19□□□□□ -1.26
PDLIM5-219ENST00000514743 MKI67P46013 3256 aaKnown RBP7.19□□□□□ -1.26
PDLIM5-219ENST00000514743 GSAPA4D1B5 854 aa7.19□□□□□ -1.26
PDLIM5-219ENST00000514743 SCAMP1O15126 338 aa7.19□□□□□ -1.26
PDLIM5-219ENST00000514743 SEC24AO95486 1093 aa7.19□□□□□ -1.26
PDLIM5-219ENST00000514743 CXCL14O95715 111 aa7.19□□□□□ -1.26
PDLIM5-219ENST00000514743 HMBSP08397 361 aa7.19□□□□□ -1.26
PDLIM5-219ENST00000514743 SLC2A4P14672 509 aa7.19□□□□□ -1.26
PDLIM5-219ENST00000514743 ZNF30P17039 623 aa7.19□□□□□ -1.26
PDLIM5-219ENST00000514743 SLC6A4P31645 630 aa7.19□□□□□ -1.26
PDLIM5-219ENST00000514743 PCGF2P35227 344 aa7.19□□□□□ -1.26
PDLIM5-219ENST00000514743 KIR3DL2P43630 455 aa7.19□□□□□ -1.26
PDLIM5-219ENST00000514743 UGT2B15P54855 530 aa7.19□□□□□ -1.26
PDLIM5-219ENST00000514743 ITKQ08881 620 aa7.19□□□□□ -1.26
PDLIM5-219ENST00000514743 GRIN2CQ14957 1233 aa7.19□□□□□ -1.26
PDLIM5-219ENST00000514743 NXNL2Q5VZ03 156 aa7.19□□□□□ -1.26
PDLIM5-219ENST00000514743 TMEM173Q86WV6 379 aaPredicted RBP7.19□□□□□ -1.26
PDLIM5-219ENST00000514743 SPPL2BQ8TCT7 592 aa7.19□□□□□ -1.26
PDLIM5-219ENST00000514743 DNAJA4Q8WW22 397 aaPredicted RBP7.19□□□□□ -1.26
PDLIM5-219ENST00000514743 NSMAFQ92636 917 aa7.19□□□□□ -1.26
PDLIM5-219ENST00000514743 HDAC10Q969S8 669 aa7.19□□□□□ -1.26
PDLIM5-219ENST00000514743 C10orf90Q96M02 699 aa7.19□□□□□ -1.26
PDLIM5-219ENST00000514743 CLUHP3Q96NS8 147 aa7.19□□□□□ -1.26
PDLIM5-219ENST00000514743 TRIB3Q96RU7 358 aa7.19□□□□□ -1.26
PDLIM5-219ENST00000514743 PDCD10Q9BUL8 212 aa7.19□□□□□ -1.26
PDLIM5-219ENST00000514743 MEAF6Q9HAF1 191 aa7.19□□□□□ -1.26
PDLIM5-219ENST00000514743 TRPV4Q9HBA0 871 aa7.19□□□□□ -1.26
PDLIM5-219ENST00000514743 ASCL3Q9NQ33 180 aa7.19□□□□□ -1.26
PDLIM5-219ENST00000514743 TMEM161AQ9NX61 479 aa7.19□□□□□ -1.26
PDLIM5-219ENST00000514743 SPHK1Q9NYA1 384 aa7.19□□□□□ -1.26
PDLIM5-219ENST00000514743 MARCH2Q9P0N8 246 aa7.19□□□□□ -1.26
PDLIM5-219ENST00000514743 SRRDQ9UH36 339 aa7.19□□□□□ -1.26
PDLIM5-219ENST00000514743 PRPF19Q9UMS4 504 aaKnown RBP7.19□□□□□ -1.26
PDLIM5-219ENST00000514743 MN1Q10571 1320 aaPredicted RBP7.18□□□□□ -1.26
PDLIM5-219ENST00000514743 A0A1W2PQ45 241 aaPredicted RBP7.18□□□□□ -1.26
PDLIM5-219ENST00000514743 A0A1W2PQY0 241 aa7.18□□□□□ -1.26
PDLIM5-219ENST00000514743 J3QW42 95 aa7.18□□□□□ -1.26
PDLIM5-219ENST00000514743 ARNTLO00327 626 aa7.18□□□□□ -1.26
PDLIM5-219ENST00000514743 PRAMEF11O60813 436 aa7.18□□□□□ -1.26
PDLIM5-219ENST00000514743 TADA2AO75478 443 aa7.18□□□□□ -1.26
PDLIM5-219ENST00000514743 HRGP04196 525 aa7.18□□□□□ -1.26
PDLIM5-219ENST00000514743 FDXRP22570 491 aa7.18□□□□□ -1.26
PDLIM5-219ENST00000514743 HOXD9P28356 352 aaPredicted RBP7.18□□□□□ -1.26
PDLIM5-219ENST00000514743 CRABP1P29762 137 aa7.18□□□□□ -1.26
PDLIM5-219ENST00000514743 OMPP47874 163 aa7.18□□□□□ -1.26
PDLIM5-219ENST00000514743 RING1Q06587 406 aa7.18□□□□□ -1.26
PDLIM5-219ENST00000514743 CEACAM7Q14002 265 aa7.18□□□□□ -1.26
PDLIM5-219ENST00000514743 ODF1Q14990 250 aa7.18□□□□□ -1.26
PDLIM5-219ENST00000514743 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.18□□□□□ -1.26
PDLIM5-219ENST00000514743 PARP15Q460N3 678 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms