RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 ROGDIQ9GZN7 287 aa13.15□□□□□ -0.3
USP46-209ENST00000514536 ADNPQ9H2P0 1102 aa13.15□□□□□ -0.3
USP46-209ENST00000514536 ELOVL6Q9H5J4 265 aa13.15□□□□□ -0.3
USP46-209ENST00000514536 FARSBQ9NSD9 589 aaKnown RBP13.15□□□□□ -0.3
USP46-209ENST00000514536 SENP1Q9P0U3 644 aa13.15□□□□□ -0.3
USP46-209ENST00000514536 TRPS1Q9UHF7 1281 aa13.15□□□□□ -0.3
USP46-209ENST00000514536 PSMD12O00232 456 aaPredicted RBP13.15□□□□□ -0.3
USP46-209ENST00000514536 CTIFO43310 598 aaKnown RBP13.15□□□□□ -0.3
USP46-209ENST00000514536 C1QL1O75973 258 aa13.15□□□□□ -0.3
USP46-209ENST00000514536 ETHE1O95571 254 aa13.15□□□□□ -0.3
USP46-209ENST00000514536 C8orf89P0DMQ9 161 aa13.15□□□□□ -0.3
USP46-209ENST00000514536 ATP5A1P25705 553 aaKnown RBP13.15□□□□□ -0.3
USP46-209ENST00000514536 RAP1GDS1P52306 607 aa13.15□□□□□ -0.3
USP46-209ENST00000514536 BTG2P78543 158 aa13.15□□□□□ -0.3
USP46-209ENST00000514536 RHAGQ02094 409 aa13.15□□□□□ -0.3
USP46-209ENST00000514536 EEF1A2Q05639 463 aaKnown RBP13.15□□□□□ -0.3
USP46-209ENST00000514536 LCP2Q13094 533 aa13.15□□□□□ -0.3
USP46-209ENST00000514536 PCLAFQ15004 111 aa13.15□□□□□ -0.3
USP46-209ENST00000514536 TUBB8Q3ZCM7 444 aa13.15□□□□□ -0.3
USP46-209ENST00000514536 LIPMQ5VYY2 423 aa13.15□□□□□ -0.3
USP46-209ENST00000514536 OR4C11Q6IEV9 310 aa13.15□□□□□ -0.3
USP46-209ENST00000514536 TMEM205Q6UW68 189 aa13.15□□□□□ -0.3
USP46-209ENST00000514536 ACOT4Q8N9L9 421 aa13.15□□□□□ -0.3
USP46-209ENST00000514536 PLPP5Q8NEB5 264 aa13.15□□□□□ -0.3
USP46-209ENST00000514536 MYRIPQ8NFW9 859 aa13.15□□□□□ -0.3
USP46-209ENST00000514536 ABHD17AQ96GS6 310 aa13.15□□□□□ -0.3
USP46-209ENST00000514536 CENPKQ9BS16 269 aa13.15□□□□□ -0.3
USP46-209ENST00000514536 ATP13A2Q9NQ11 1180 aa13.15□□□□□ -0.3
USP46-209ENST00000514536 PSD3Q9NYI0 1048 aa13.15□□□□□ -0.3
USP46-209ENST00000514536 SNX6Q9UNH7 406 aa13.15□□□□□ -0.3
USP46-209ENST00000514536 PCSK5Q92824 1860 aa13.15□□□□□ -0.31
USP46-209ENST00000514536 EIF4E1BA6NMX2 242 aaKnown RBP13.14□□□□□ -0.31
USP46-209ENST00000514536 MKRN2OSH3BPM6 223 aa13.14□□□□□ -0.31
USP46-209ENST00000514536 PLPP1O14494 284 aa13.14□□□□□ -0.31
USP46-209ENST00000514536 UBFD1O14562 309 aaKnown RBP13.14□□□□□ -0.31
USP46-209ENST00000514536 TYROBPO43914 113 aa13.14□□□□□ -0.31
USP46-209ENST00000514536 TRIM13O60858 407 aa13.14□□□□□ -0.31
USP46-209ENST00000514536 PDYNP01213 254 aa13.14□□□□□ -0.31
USP46-209ENST00000514536 SFTPCP11686 197 aa13.14□□□□□ -0.31
USP46-209ENST00000514536 HIST1H1TP22492 207 aaPredicted RBP13.14□□□□□ -0.31
USP46-209ENST00000514536 JAK1P23458 1154 aa13.14□□□□□ -0.31
USP46-209ENST00000514536 ALDH3A1P30838 453 aa13.14□□□□□ -0.31
USP46-209ENST00000514536 SSR2P43308 183 aa13.14□□□□□ -0.31
USP46-209ENST00000514536 LIM2P55344 173 aa13.14□□□□□ -0.31
USP46-209ENST00000514536 PKNOX1P55347 436 aa13.14□□□□□ -0.31
USP46-209ENST00000514536 CUL3Q13618 768 aa13.14□□□□□ -0.31
USP46-209ENST00000514536 NSDHLQ15738 373 aa13.14□□□□□ -0.31
USP46-209ENST00000514536 TNFAIP8L3Q5GJ75 292 aa13.14□□□□□ -0.31
USP46-209ENST00000514536 LANCL3Q6ZV70 420 aa13.14□□□□□ -0.31
USP46-209ENST00000514536 PARP9Q8IXQ6 854 aa13.14□□□□□ -0.31
USP46-209ENST00000514536 CLEC1AQ8NC01 280 aa13.14□□□□□ -0.31
USP46-209ENST00000514536 METTL6Q8TCB7 284 aa13.14□□□□□ -0.31
USP46-209ENST00000514536 SELENOMQ8WWX9 145 aa13.14□□□□□ -0.31
USP46-209ENST00000514536 PGM2Q96G03 612 aa13.14□□□□□ -0.31
USP46-209ENST00000514536 PTCHD1Q96NR3 888 aa13.14□□□□□ -0.31
USP46-209ENST00000514536 SERPINI1Q99574 410 aa13.14□□□□□ -0.31
USP46-209ENST00000514536 GATA5Q9BWX5 397 aaPredicted RBP13.14□□□□□ -0.31
USP46-209ENST00000514536 MID1IP1Q9NPA3 183 aa13.14□□□□□ -0.31
USP46-209ENST00000514536 KCMF1Q9P0J7 381 aa13.14□□□□□ -0.31
USP46-209ENST00000514536 TUBD1Q9UJT1 453 aa13.14□□□□□ -0.31
USP46-209ENST00000514536 DAPP1Q9UN19 280 aa13.14□□□□□ -0.31
USP46-209ENST00000514536 STK38LQ9Y2H1 464 aa13.14□□□□□ -0.31
USP46-209ENST00000514536 LOC102723996A0A087X1L8 192 aa13.13□□□□□ -0.31
USP46-209ENST00000514536 IGHV3-20A0A0C4DH32 117 aa13.13□□□□□ -0.31
USP46-209ENST00000514536 MANBAO00462 879 aa13.13□□□□□ -0.31
USP46-209ENST00000514536 PRMT3O60678 531 aa13.13□□□□□ -0.31
USP46-209ENST00000514536 HPP00738 406 aa13.13□□□□□ -0.31
USP46-209ENST00000514536 CYC1P08574 325 aa13.13□□□□□ -0.31
USP46-209ENST00000514536 COX6A1P12074 109 aa13.13□□□□□ -0.31
USP46-209ENST00000514536 HMOX2P30519 316 aa13.13□□□□□ -0.31
USP46-209ENST00000514536 RAB38P57729 211 aa13.13□□□□□ -0.31
USP46-209ENST00000514536 NAA20P61599 178 aa13.13□□□□□ -0.31
USP46-209ENST00000514536 SLAMF1Q13291 335 aa13.13□□□□□ -0.31
USP46-209ENST00000514536 RAPSNQ13702 412 aa13.13□□□□□ -0.31
USP46-209ENST00000514536 ABRAXAS2Q15018 415 aa13.13□□□□□ -0.31
USP46-209ENST00000514536 TCHHL1Q5QJ38 904 aaPredicted RBP13.13□□□□□ -0.31
USP46-209ENST00000514536 C10orf62Q5T681 223 aaPredicted RBP13.13□□□□□ -0.31
USP46-209ENST00000514536 FRMD7Q6ZUT3 714 aa13.13□□□□□ -0.31
USP46-209ENST00000514536 NDUFAF7Q7L592 441 aa13.13□□□□□ -0.31
USP46-209ENST00000514536 CPEB2Q7Z5Q1 589 aaKnown RBP13.13□□□□□ -0.31
USP46-209ENST00000514536 ANKRD37Q7Z713 158 aa13.13□□□□□ -0.31
USP46-209ENST00000514536 FDCSPQ8NFU4 85 aa13.13□□□□□ -0.31
USP46-209ENST00000514536 TSLPQ969D9 159 aa13.13□□□□□ -0.31
USP46-209ENST00000514536 SLC25A23Q9BV35 468 aa13.13□□□□□ -0.31
USP46-209ENST00000514536 MECRQ9BV79 373 aa13.13□□□□□ -0.31
USP46-209ENST00000514536 SLC29A3Q9BZD2 475 aa13.13□□□□□ -0.31
USP46-209ENST00000514536 SHCBP1LQ9BZQ2 653 aa13.13□□□□□ -0.31
USP46-209ENST00000514536 ZNF160Q9HCG1 818 aa13.13□□□□□ -0.31
USP46-209ENST00000514536 ZNF71Q9NQZ8 489 aaPredicted RBP13.13□□□□□ -0.31
USP46-209ENST00000514536 PPT2Q9UMR5 302 aa13.13□□□□□ -0.31
USP46-209ENST00000514536 TIMM22Q9Y584 194 aa13.13□□□□□ -0.31
USP46-209ENST00000514536 IGHV1-45A0A0A0MS14 117 aa13.12□□□□□ -0.31
USP46-209ENST00000514536 NSG1A0A0A6YYJ2 146 aa13.12□□□□□ -0.31
USP46-209ENST00000514536 K7EM74 188 aa13.12□□□□□ -0.31
USP46-209ENST00000514536 PCDH17O14917 1159 aa13.12□□□□□ -0.31
USP46-209ENST00000514536 ULK1O75385 1050 aa13.12□□□□□ -0.31
USP46-209ENST00000514536 ESRRBO95718 433 aa13.12□□□□□ -0.31
USP46-209ENST00000514536 KRT6AP02538 564 aa13.12□□□□□ -0.31
USP46-209ENST00000514536 KRT6BP04259 564 aa13.12□□□□□ -0.31
USP46-209ENST00000514536 ENO1P06733 434 aaKnown RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms