RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 MTTPP55157 894 aa9.78□□□□□ -0.84
HMGXB3-205ENST00000514469 HSD17B7P56937 341 aa9.78□□□□□ -0.84
HMGXB3-205ENST00000514469 IRF9Q00978 393 aa9.78□□□□□ -0.84
HMGXB3-205ENST00000514469 SLC7A5Q01650 507 aa9.78□□□□□ -0.84
HMGXB3-205ENST00000514469 PCDH1Q08174 1060 aa9.78□□□□□ -0.84
HMGXB3-205ENST00000514469 CHIT1Q13231 466 aa9.78□□□□□ -0.84
HMGXB3-205ENST00000514469 LAPTM5Q13571 262 aa9.78□□□□□ -0.84
HMGXB3-205ENST00000514469 BMPR2Q13873 1038 aa9.78□□□□□ -0.84
HMGXB3-205ENST00000514469 ZRSR2Q15696 482 aaKnown RBP9.78□□□□□ -0.84
HMGXB3-205ENST00000514469 PAGE2BQ5JRK9 111 aa9.78□□□□□ -0.84
HMGXB3-205ENST00000514469 ZNF468Q5VIY5 522 aaPredicted RBP9.78□□□□□ -0.84
HMGXB3-205ENST00000514469 C1QL3Q5VWW1 255 aa9.78□□□□□ -0.84
HMGXB3-205ENST00000514469 SPINK14Q6IE38 97 aa9.78□□□□□ -0.84
HMGXB3-205ENST00000514469 GFRALQ6UXV0 394 aa9.78□□□□□ -0.84
HMGXB3-205ENST00000514469 CCDC91Q7Z6B0 441 aa9.78□□□□□ -0.84
HMGXB3-205ENST00000514469 RPS19BP1Q86WX3 136 aaKnown RBP9.78□□□□□ -0.84
HMGXB3-205ENST00000514469 ZNF595Q8IYB9 648 aa9.78□□□□□ -0.84
HMGXB3-205ENST00000514469 LAS2Q8IYD9 372 aa9.78□□□□□ -0.84
HMGXB3-205ENST00000514469 CENPLQ8N0S6 344 aaPredicted RBP9.78□□□□□ -0.84
HMGXB3-205ENST00000514469 CYP4X1Q8N118 509 aa9.78□□□□□ -0.84
HMGXB3-205ENST00000514469 FAM47BQ8NA70 645 aa9.78□□□□□ -0.84
HMGXB3-205ENST00000514469 TMEM178AQ8NBL3 297 aa9.78□□□□□ -0.84
HMGXB3-205ENST00000514469 APCDD1LQ8NCL9 501 aa9.78□□□□□ -0.84
HMGXB3-205ENST00000514469 B3GNT7Q8NFL0 401 aa9.78□□□□□ -0.84
HMGXB3-205ENST00000514469 RELTQ969Z4 430 aa9.78□□□□□ -0.84
HMGXB3-205ENST00000514469 FRMD6Q96NE9 622 aa9.78□□□□□ -0.84
HMGXB3-205ENST00000514469 SERINC2Q96SA4 455 aa9.78□□□□□ -0.84
HMGXB3-205ENST00000514469 CSF3RQ99062 836 aa9.78□□□□□ -0.84
HMGXB3-205ENST00000514469 LRRC1Q9BTT6 524 aa9.78□□□□□ -0.84
HMGXB3-205ENST00000514469 CDCP1Q9H5V8 836 aa9.78□□□□□ -0.84
HMGXB3-205ENST00000514469 TRIM45Q9H8W5 580 aaPredicted RBP9.78□□□□□ -0.84
HMGXB3-205ENST00000514469 MRPS33Q9Y291 106 aaKnown RBP9.78□□□□□ -0.84
HMGXB3-205ENST00000514469 CELSR2Q9HCU4 2923 aa9.78□□□□□ -0.84
HMGXB3-205ENST00000514469 A0A087X1B8 175 aa9.77□□□□□ -0.85
HMGXB3-205ENST00000514469 CCDC189A1A4V9 331 aa9.77□□□□□ -0.85
HMGXB3-205ENST00000514469 SYNDIG1LA6NDD5 238 aa9.77□□□□□ -0.85
HMGXB3-205ENST00000514469 SYCE1LA8MT33 242 aa9.77□□□□□ -0.85
HMGXB3-205ENST00000514469 A8MUA0 341 aa9.77□□□□□ -0.85
HMGXB3-205ENST00000514469 K7EPI3 171 aa9.77□□□□□ -0.85
HMGXB3-205ENST00000514469 CYR61O00622 381 aa9.77□□□□□ -0.85
HMGXB3-205ENST00000514469 SCELO95171 688 aa9.77□□□□□ -0.85
HMGXB3-205ENST00000514469 MTHFD2P13995 350 aa9.77□□□□□ -0.85
HMGXB3-205ENST00000514469 CD46P15529 392 aa9.77□□□□□ -0.85
HMGXB3-205ENST00000514469 EEF1DP29692 281 aaKnown RBP9.77□□□□□ -0.85
HMGXB3-205ENST00000514469 TRHRP34981 398 aaPredicted RBP9.77□□□□□ -0.85
HMGXB3-205ENST00000514469 MSH2P43246 934 aa9.77□□□□□ -0.85
HMGXB3-205ENST00000514469 LIM2P55344 173 aa9.77□□□□□ -0.85
HMGXB3-205ENST00000514469 MLF1P58340 268 aa9.77□□□□□ -0.85
HMGXB3-205ENST00000514469 IRF8Q02556 426 aa9.77□□□□□ -0.85
HMGXB3-205ENST00000514469 SRSF11Q05519 484 aaKnown RBP9.77□□□□□ -0.85
HMGXB3-205ENST00000514469 TGM3Q08188 693 aa9.77□□□□□ -0.85
HMGXB3-205ENST00000514469 NAA30Q147X3 362 aaPredicted RBP9.77□□□□□ -0.85
HMGXB3-205ENST00000514469 HIST2H2ACQ16777 129 aaPredicted RBP9.77□□□□□ -0.85
HMGXB3-205ENST00000514469 WHAMMP3Q1A5X7 153 aa9.77□□□□□ -0.85
HMGXB3-205ENST00000514469 UBAP2Q5T6F2 1119 aaKnown RBP9.77□□□□□ -0.85
HMGXB3-205ENST00000514469 HIST2H2AA3Q6FI13 130 aa9.77□□□□□ -0.85
HMGXB3-205ENST00000514469 ZNF793Q6ZN11 406 aa9.77□□□□□ -0.85
HMGXB3-205ENST00000514469 UBE3DQ7Z6J8 389 aa9.77□□□□□ -0.85
HMGXB3-205ENST00000514469 FJX1Q86VR8 437 aa9.77□□□□□ -0.85
HMGXB3-205ENST00000514469 RELL1Q8IUW5 271 aa9.77□□□□□ -0.85
HMGXB3-205ENST00000514469 HORMAD2Q8N7B1 307 aa9.77□□□□□ -0.85
HMGXB3-205ENST00000514469 RHEBL1Q8TAI7 183 aa9.77□□□□□ -0.85
HMGXB3-205ENST00000514469 ZNF473Q8WTR7 871 aaKnown RBP9.77□□□□□ -0.85
HMGXB3-205ENST00000514469 KCTD4Q8WVF5 259 aa9.77□□□□□ -0.85
HMGXB3-205ENST00000514469 NXNL1Q96CM4 212 aa9.77□□□□□ -0.85
HMGXB3-205ENST00000514469 C16orf45Q96MC5 204 aaPredicted RBP9.77□□□□□ -0.85
HMGXB3-205ENST00000514469 KCNC2Q96PR1 638 aa9.77□□□□□ -0.85
HMGXB3-205ENST00000514469 F2RL3Q96RI0 385 aa9.77□□□□□ -0.85
HMGXB3-205ENST00000514469 MS4A8Q9BY19 250 aa9.77□□□□□ -0.85
HMGXB3-205ENST00000514469 FUT8Q9BYC5 575 aa9.77□□□□□ -0.85
HMGXB3-205ENST00000514469 ACSS3Q9H6R3 686 aa9.77□□□□□ -0.85
HMGXB3-205ENST00000514469 COPS7BQ9H9Q2 264 aaPredicted RBP9.77□□□□□ -0.85
HMGXB3-205ENST00000514469 PRDM7Q9NQW5 492 aa9.77□□□□□ -0.85
HMGXB3-205ENST00000514469 KLHL1Q9NR64 748 aa9.77□□□□□ -0.85
HMGXB3-205ENST00000514469 PRTFDC1Q9NRG1 225 aa9.77□□□□□ -0.85
HMGXB3-205ENST00000514469 SNX15Q9NRS6 342 aa9.77□□□□□ -0.85
HMGXB3-205ENST00000514469 NINJ2Q9NZG7 142 aa9.77□□□□□ -0.85
HMGXB3-205ENST00000514469 LRFN1Q9P244 771 aa9.77□□□□□ -0.85
HMGXB3-205ENST00000514469 OPTCQ9UBM4 332 aa9.77□□□□□ -0.85
HMGXB3-205ENST00000514469 SEC14L3Q9UDX4 400 aa9.77□□□□□ -0.85
HMGXB3-205ENST00000514469 ZNF223Q9UK11 482 aaPredicted RBP9.77□□□□□ -0.85
HMGXB3-205ENST00000514469 DAPP1Q9UN19 280 aa9.77□□□□□ -0.85
HMGXB3-205ENST00000514469 ACOT9Q9Y305 439 aa9.77□□□□□ -0.85
HMGXB3-205ENST00000514469 HIVEP3Q5T1R4 2406 aa9.77□□□□□ -0.85
HMGXB3-205ENST00000514469 CENPEQ02224 2701 aa9.76□□□□□ -0.85
HMGXB3-205ENST00000514469 CRYBG3Q68DQ2 2970 aa9.76□□□□□ -0.85
HMGXB3-205ENST00000514469 NAV2Q8IVL1 2488 aa9.76□□□□□ -0.85
HMGXB3-205ENST00000514469 ESPL1Q14674 2120 aa9.76□□□□□ -0.85
HMGXB3-205ENST00000514469 TRBV11-1A0A0K0K1C0 115 aa9.76□□□□□ -0.85
HMGXB3-205ENST00000514469 CLDN4O14493 209 aa9.76□□□□□ -0.85
HMGXB3-205ENST00000514469 FCHO1O14526 889 aa9.76□□□□□ -0.85
HMGXB3-205ENST00000514469 NME2P1O60361 137 aa9.76□□□□□ -0.85
HMGXB3-205ENST00000514469 ZG16O60844 167 aa9.76□□□□□ -0.85
HMGXB3-205ENST00000514469 SLC25A12O75746 678 aa9.76□□□□□ -0.85
HMGXB3-205ENST00000514469 WISP2O76076 250 aa9.76□□□□□ -0.85
HMGXB3-205ENST00000514469 MYO1DO94832 1006 aa9.76□□□□□ -0.85
HMGXB3-205ENST00000514469 ALDOAP04075 364 aaKnown RBP9.76□□□□□ -0.85
HMGXB3-205ENST00000514469 C2P06681 752 aa9.76□□□□□ -0.85
HMGXB3-205ENST00000514469 SP1P08047 785 aa9.76□□□□□ -0.85
HMGXB3-205ENST00000514469 NME2P22392 152 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms