RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 HK1P19367 917 aa7.1□□□□□ -1.27
CLIP1-205ENST00000514271 C5AR1P21730 350 aa7.1□□□□□ -1.27
CLIP1-205ENST00000514271 PRIM2P49643 509 aa7.1□□□□□ -1.27
CLIP1-205ENST00000514271 SQSTM1Q13501 440 aa7.1□□□□□ -1.27
CLIP1-205ENST00000514271 MFSD13AQ14CX5 517 aa7.1□□□□□ -1.27
CLIP1-205ENST00000514271 ZNF658BQ4V348 819 aaPredicted RBP7.1□□□□□ -1.27
CLIP1-205ENST00000514271 FNDC3BQ53EP0 1204 aaKnown RBP7.1□□□□□ -1.27
CLIP1-205ENST00000514271 ZNF628Q5EBL2 1059 aa7.1□□□□□ -1.27
CLIP1-205ENST00000514271 SIRPB2Q5JXA9 342 aa7.1□□□□□ -1.27
CLIP1-205ENST00000514271 SUSD1Q6UWL2 747 aa7.1□□□□□ -1.27
CLIP1-205ENST00000514271 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.1□□□□□ -1.27
CLIP1-205ENST00000514271 PID1Q7Z2X4 250 aa7.1□□□□□ -1.27
CLIP1-205ENST00000514271 ZZZ3Q8IYH5 903 aa7.1□□□□□ -1.27
CLIP1-205ENST00000514271 ATPAF2Q8N5M1 289 aa7.1□□□□□ -1.27
CLIP1-205ENST00000514271 TSTD1Q8NFU3 115 aa7.1□□□□□ -1.27
CLIP1-205ENST00000514271 SLC7A6Q92536 515 aa7.1□□□□□ -1.27
CLIP1-205ENST00000514271 ZFYVE19Q96K21 471 aa7.1□□□□□ -1.27
CLIP1-205ENST00000514271 ITPAQ9BY32 194 aa7.1□□□□□ -1.27
CLIP1-205ENST00000514271 PPP1R3EQ9H7J1 279 aa7.1□□□□□ -1.27
CLIP1-205ENST00000514271 SYNDIG1Q9H7V2 258 aa7.1□□□□□ -1.27
CLIP1-205ENST00000514271 RAD18Q9NS91 495 aa7.1□□□□□ -1.27
CLIP1-205ENST00000514271 UBA2Q9UBT2 640 aaPredicted RBP7.1□□□□□ -1.27
CLIP1-205ENST00000514271 KLHL21Q9UJP4 597 aa7.1□□□□□ -1.27
CLIP1-205ENST00000514271 ANGPTL3Q9Y5C1 460 aa7.1□□□□□ -1.27
CLIP1-205ENST00000514271 STON1Q9Y6Q2 735 aa7.1□□□□□ -1.27
CLIP1-205ENST00000514271 SYNJ2BP-COX16A0A087WUM0 186 aa7.1□□□□□ -1.27
CLIP1-205ENST00000514271 TSPAN11A1L157 253 aa7.1□□□□□ -1.27
CLIP1-205ENST00000514271 XPNPEP2O43895 674 aa7.1□□□□□ -1.27
CLIP1-205ENST00000514271 RNGTTO60942 597 aaKnown RBP7.1□□□□□ -1.27
CLIP1-205ENST00000514271 SOCS5O75159 536 aa7.1□□□□□ -1.27
CLIP1-205ENST00000514271 ANXA9O76027 345 aa7.1□□□□□ -1.27
CLIP1-205ENST00000514271 ADORA3P0DMS8 318 aa7.1□□□□□ -1.27
CLIP1-205ENST00000514271 HOXB2P14652 356 aa7.1□□□□□ -1.27
CLIP1-205ENST00000514271 NR4A1P22736 598 aa7.1□□□□□ -1.27
CLIP1-205ENST00000514271 MAN2A2P49641 1150 aa7.1□□□□□ -1.27
CLIP1-205ENST00000514271 RPS24P62847 133 aaKnown RBP7.1□□□□□ -1.27
CLIP1-205ENST00000514271 FUT11Q495W5 492 aa7.1□□□□□ -1.27
CLIP1-205ENST00000514271 NDUFAF5Q5TEU4 345 aa7.1□□□□□ -1.27
CLIP1-205ENST00000514271 DBX2Q6ZNG2 339 aa7.1□□□□□ -1.27
CLIP1-205ENST00000514271 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.1□□□□□ -1.271e-7■■■■■ 28.3
CLIP1-205ENST00000514271 NECAB3Q96P71 396 aaPredicted RBP7.1□□□□□ -1.27
CLIP1-205ENST00000514271 NTMT1Q9BV86 223 aa7.1□□□□□ -1.27
CLIP1-205ENST00000514271 SPATA6Q9NWH7 488 aaPredicted RBP7.1□□□□□ -1.27
CLIP1-205ENST00000514271 SLCO1C1Q9NYB5 712 aa7.1□□□□□ -1.27
CLIP1-205ENST00000514271 CD274Q9NZQ7 290 aa7.1□□□□□ -1.27
CLIP1-205ENST00000514271 COX16Q9P0S2 106 aa7.1□□□□□ -1.27
CLIP1-205ENST00000514271 PLEKHB1Q9UF11 243 aaPredicted RBP7.1□□□□□ -1.27
CLIP1-205ENST00000514271 PPT2Q9UMR5 302 aa7.1□□□□□ -1.27
CLIP1-205ENST00000514271 PCDHGA5Q9Y5G8 931 aa7.1□□□□□ -1.27
CLIP1-205ENST00000514271 TNPO3Q9Y5L0 923 aaKnown RBP7.1□□□□□ -1.27
CLIP1-205ENST00000514271 SNX10Q9Y5X0 201 aa7.1□□□□□ -1.27
CLIP1-205ENST00000514271 NPTNQ9Y639 398 aa7.1□□□□□ -1.27
CLIP1-205ENST00000514271 PROB1E7EW31 1015 aa7.1□□□□□ -1.27
CLIP1-205ENST00000514271 HYAL3O43820 417 aaPredicted RBP7.1□□□□□ -1.27
CLIP1-205ENST00000514271 TSPAN3O60637 253 aa7.1□□□□□ -1.27
CLIP1-205ENST00000514271 MITFO75030 526 aaPredicted RBP7.1□□□□□ -1.27
CLIP1-205ENST00000514271 DEAF1O75398 565 aaPredicted RBP7.1□□□□□ -1.27
CLIP1-205ENST00000514271 TDGF1P13385 188 aa7.1□□□□□ -1.27
CLIP1-205ENST00000514271 HGFP14210 728 aa7.1□□□□□ -1.27
CLIP1-205ENST00000514271 BTCP35070 178 aa7.1□□□□□ -1.27
CLIP1-205ENST00000514271 BNC1Q01954 994 aa7.1□□□□□ -1.27
CLIP1-205ENST00000514271 SMN1Q16637 294 aaKnown RBP7.1□□□□□ -1.27
CLIP1-205ENST00000514271 C6orf183Q5T699 404 aa7.1□□□□□ -1.27
CLIP1-205ENST00000514271 SERPINA13PQ6UXR4 307 aa7.1□□□□□ -1.27
CLIP1-205ENST00000514271 CBLL1Q75N03 491 aa7.1□□□□□ -1.27
CLIP1-205ENST00000514271 ZNF438Q7Z4V0 828 aa7.1□□□□□ -1.27
CLIP1-205ENST00000514271 ASCC1Q8N9N2 400 aaKnown RBP7.1□□□□□ -1.27
CLIP1-205ENST00000514271 CADM4Q8NFZ8 388 aa7.1□□□□□ -1.27
CLIP1-205ENST00000514271 MCOLN3Q8TDD5 553 aa7.1□□□□□ -1.27
CLIP1-205ENST00000514271 GGHQ92820 318 aa7.1□□□□□ -1.27
CLIP1-205ENST00000514271 CHFRQ96EP1 664 aa7.1□□□□□ -1.27
CLIP1-205ENST00000514271 TSPAN17Q96FV3 270 aa7.1□□□□□ -1.27
CLIP1-205ENST00000514271 TMEM80Q96HE8 168 aa7.1□□□□□ -1.27
CLIP1-205ENST00000514271 LRFN3Q9BTN0 628 aa7.1□□□□□ -1.27
CLIP1-205ENST00000514271 JAM3Q9BX67 310 aa7.1□□□□□ -1.27
CLIP1-205ENST00000514271 HHATLQ9HCP6 504 aa7.1□□□□□ -1.27
CLIP1-205ENST00000514271 PLSCR3Q9NRY6 295 aa7.1□□□□□ -1.27
CLIP1-205ENST00000514271 NDRG2Q9UN36 371 aaKnown RBP7.1□□□□□ -1.27
CLIP1-205ENST00000514271 WBP11Q9Y2W2 641 aaKnown RBP7.1□□□□□ -1.27
CLIP1-205ENST00000514271 CHD9Q3L8U1 2897 aa7.09□□□□□ -1.27
CLIP1-205ENST00000514271 A0A096LPI6 279 aa7.09□□□□□ -1.27
CLIP1-205ENST00000514271 FADS2P1A8MWK0 482 aa7.09□□□□□ -1.27
CLIP1-205ENST00000514271 POLR1CO15160 346 aaPredicted RBP7.09□□□□□ -1.27
CLIP1-205ENST00000514271 YY2O15391 372 aa7.09□□□□□ -1.27
CLIP1-205ENST00000514271 SLITRK5O94991 958 aa7.09□□□□□ -1.27
CLIP1-205ENST00000514271 KLF8O95600 359 aaPredicted RBP7.09□□□□□ -1.27
CLIP1-205ENST00000514271 POP4O95707 220 aaKnown RBP7.09□□□□□ -1.27
CLIP1-205ENST00000514271 CA5AP35218 305 aa7.09□□□□□ -1.27
CLIP1-205ENST00000514271 GGT2P36268 569 aa7.09□□□□□ -1.27
CLIP1-205ENST00000514271 GEMP55040 296 aa7.09□□□□□ -1.27
CLIP1-205ENST00000514271 PSPHP78330 225 aa7.09□□□□□ -1.27
CLIP1-205ENST00000514271 DHODHQ02127 395 aa7.09□□□□□ -1.27
CLIP1-205ENST00000514271 CSHL1Q14406 222 aa7.09□□□□□ -1.27
CLIP1-205ENST00000514271 ZNF234Q14588 700 aa7.09□□□□□ -1.27
CLIP1-205ENST00000514271 RNF130Q86XS8 419 aa7.09□□□□□ -1.27
CLIP1-205ENST00000514271 HIPK1Q86Z02 1210 aa7.09□□□□□ -1.27
CLIP1-205ENST00000514271 FAM9CQ8IZT9 166 aa7.09□□□□□ -1.27
CLIP1-205ENST00000514271 EID3Q8N140 333 aa7.09□□□□□ -1.27
CLIP1-205ENST00000514271 OR4K2Q8NGD2 314 aa7.09□□□□□ -1.27
CLIP1-205ENST00000514271 TOE1Q96GM8 510 aaKnown RBP7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms