RNA–Protein interactions for RNA: ENST00000514110.5

SNHG4-208, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 1 (best)

Gene SNHG4, Length 679 nt, Biotype retained intron, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-208ENST00000514110 WISP3O95389 354 aaPredicted RBP11.38□□□□□ -0.59
SNHG4-208ENST00000514110 CLCN2P51788 898 aa11.38□□□□□ -0.59
SNHG4-208ENST00000514110 GPR143P51810 404 aa11.38□□□□□ -0.59
SNHG4-208ENST00000514110 RAB38P57729 211 aa11.38□□□□□ -0.59
SNHG4-208ENST00000514110 TERF2Q15554 542 aa11.38□□□□□ -0.59
SNHG4-208ENST00000514110 TGFBIQ15582 683 aa11.38□□□□□ -0.59
SNHG4-208ENST00000514110 FBXO48Q5FWF7 155 aa11.38□□□□□ -0.59
SNHG4-208ENST00000514110 PRAMEF9Q5VWM5 478 aa11.38□□□□□ -0.59
SNHG4-208ENST00000514110 ADNP2Q6IQ32 1131 aa11.38□□□□□ -0.59
SNHG4-208ENST00000514110 C16orf47Q6ZP98 133 aaPredicted RBP11.38□□□□□ -0.59
SNHG4-208ENST00000514110 MDGA2Q7Z553 956 aa11.38□□□□□ -0.59
SNHG4-208ENST00000514110 VN1R5Q7Z5H4 357 aa11.38□□□□□ -0.59
SNHG4-208ENST00000514110 CYP4Z2PQ8N1L4 340 aa11.38□□□□□ -0.59
SNHG4-208ENST00000514110 SPATA6LQ8N4H0 392 aa11.38□□□□□ -0.59
SNHG4-208ENST00000514110 FAM47BQ8NA70 645 aa11.38□□□□□ -0.59
SNHG4-208ENST00000514110 POGLUT1Q8NBL1 392 aa11.38□□□□□ -0.59
SNHG4-208ENST00000514110 PHF10Q8WUB8 498 aaKnown RBP11.38□□□□□ -0.59
SNHG4-208ENST00000514110 NCLNQ969V3 563 aa11.38□□□□□ -0.59
SNHG4-208ENST00000514110 ESAMQ96AP7 390 aa11.38□□□□□ -0.59
SNHG4-208ENST00000514110 VPS39Q96JC1 886 aa11.38□□□□□ -0.59
SNHG4-208ENST00000514110 RUNDC3BQ96NL0 473 aa11.38□□□□□ -0.59
SNHG4-208ENST00000514110 VKORC1Q9BQB6 163 aa11.38□□□□□ -0.59
SNHG4-208ENST00000514110 TMEM79Q9BSE2 394 aa11.38□□□□□ -0.59
SNHG4-208ENST00000514110 NPLQ9BXD5 320 aaPredicted RBP11.38□□□□□ -0.59
SNHG4-208ENST00000514110 DERL2Q9GZP9 239 aa11.38□□□□□ -0.59
SNHG4-208ENST00000514110 RHOJQ9H4E5 214 aa11.38□□□□□ -0.59
SNHG4-208ENST00000514110 PPIEQ9UNP9 301 aaKnown RBP11.38□□□□□ -0.59
SNHG4-208ENST00000514110 MTO1Q9Y2Z2 717 aaKnown RBP11.38□□□□□ -0.59
SNHG4-208ENST00000514110 HRH3Q9Y5N1 445 aa11.38□□□□□ -0.59
SNHG4-208ENST00000514110 PCNX1Q96RV3 2341 aa11.37□□□□□ -0.59
SNHG4-208ENST00000514110 A0A1B0GTH9 108 aa11.37□□□□□ -0.59
SNHG4-208ENST00000514110 MYOCOSA0A1B0GUC4 107 aa11.37□□□□□ -0.59
SNHG4-208ENST00000514110 TMEM200CA6NKL6 621 aa11.37□□□□□ -0.59
SNHG4-208ENST00000514110 KLRC4-KLRK1H3BQV0 150 aa11.37□□□□□ -0.59
SNHG4-208ENST00000514110 PRRG2O14669 202 aa11.37□□□□□ -0.59
SNHG4-208ENST00000514110 CLEC3AO75596 197 aa11.37□□□□□ -0.59
SNHG4-208ENST00000514110 CERS1P27544 350 aa11.37□□□□□ -0.59
SNHG4-208ENST00000514110 RPL21P46778 160 aaKnown RBP11.37□□□□□ -0.59
SNHG4-208ENST00000514110 NR0B1P51843 470 aaKnown RBP11.37□□□□□ -0.59
SNHG4-208ENST00000514110 PLA2G16P53816 162 aa11.37□□□□□ -0.59
SNHG4-208ENST00000514110 HSD17B7P56937 341 aa11.37□□□□□ -0.59
SNHG4-208ENST00000514110 GPR85P60893 370 aa11.37□□□□□ -0.59
SNHG4-208ENST00000514110 SLC13A2Q13183 592 aa11.37□□□□□ -0.59
SNHG4-208ENST00000514110 ADPRMQ3LIE5 342 aa11.37□□□□□ -0.59
SNHG4-208ENST00000514110 CMPK2Q5EBM0 449 aa11.37□□□□□ -0.59
SNHG4-208ENST00000514110 CAPN12Q6ZSI9 719 aa11.37□□□□□ -0.59
SNHG4-208ENST00000514110 CLNKQ7Z7G1 428 aa11.37□□□□□ -0.59
SNHG4-208ENST00000514110 ZBED8Q8IZ13 594 aa11.37□□□□□ -0.59
SNHG4-208ENST00000514110 KRT78Q8N1N4 520 aa11.37□□□□□ -0.59
SNHG4-208ENST00000514110 TMEM156Q8N614 296 aa11.37□□□□□ -0.59
SNHG4-208ENST00000514110 TTLQ8NG68 377 aa11.37□□□□□ -0.59
SNHG4-208ENST00000514110 OR2L5Q8NG80 312 aa11.37□□□□□ -0.59
SNHG4-208ENST00000514110 C16orf52Q8NHV5 167 aa11.37□□□□□ -0.59
SNHG4-208ENST00000514110 FAM57AQ8TBR7 257 aa11.37□□□□□ -0.59
SNHG4-208ENST00000514110 VMP1Q96GC9 406 aa11.37□□□□□ -0.59
SNHG4-208ENST00000514110 CSF3RQ99062 836 aa11.37□□□□□ -0.59
SNHG4-208ENST00000514110 REXO4Q9GZR2 422 aaKnown RBP11.37□□□□□ -0.59
SNHG4-208ENST00000514110 NT5DC2Q9H857 520 aa11.37□□□□□ -0.59
SNHG4-208ENST00000514110 CAB39LQ9H9S4 337 aa11.37□□□□□ -0.59
SNHG4-208ENST00000514110 LIN28AQ9H9Z2 209 aaKnown RBP11.37□□□□□ -0.59
SNHG4-208ENST00000514110 POPDC3Q9HBV1 291 aa11.37□□□□□ -0.59
SNHG4-208ENST00000514110 DEPPQ9NTK1 212 aa11.37□□□□□ -0.59
SNHG4-208ENST00000514110 NSMCE4AQ9NXX6 385 aa11.37□□□□□ -0.59
SNHG4-208ENST00000514110 KCMF1Q9P0J7 381 aa11.37□□□□□ -0.59
SNHG4-208ENST00000514110 ZNF490Q9ULM2 529 aaPredicted RBP11.37□□□□□ -0.59
SNHG4-208ENST00000514110 PPT2Q9UMR5 302 aa11.37□□□□□ -0.59
SNHG4-208ENST00000514110 GTF3C1Q12789 2109 aa11.36□□□□□ -0.59
SNHG4-208ENST00000514110 ANKDD1BA6NHY2 528 aa11.36□□□□□ -0.59
SNHG4-208ENST00000514110 EFCAB8A8MWE9 144 aa11.36□□□□□ -0.59
SNHG4-208ENST00000514110 CXorf49A8MYA2 514 aaPredicted RBP11.36□□□□□ -0.59
SNHG4-208ENST00000514110 CYR61O00622 381 aa11.36□□□□□ -0.59
SNHG4-208ENST00000514110 CLDN4O14493 209 aa11.36□□□□□ -0.59
SNHG4-208ENST00000514110 PHGDHO43175 533 aaKnown RBP11.36□□□□□ -0.59
SNHG4-208ENST00000514110 B3GALT2O43825 422 aa11.36□□□□□ -0.59
SNHG4-208ENST00000514110 CDC40O60508 579 aaKnown RBP eCLIP11.36□□□□□ -0.59
SNHG4-208ENST00000514110 OR2J2O76002 312 aa11.36□□□□□ -0.59
SNHG4-208ENST00000514110 ZFAND5O76080 213 aa11.36□□□□□ -0.59
SNHG4-208ENST00000514110 TFEBP19484 476 aa11.36□□□□□ -0.59
SNHG4-208ENST00000514110 CD22P20273 847 aa11.36□□□□□ -0.59
SNHG4-208ENST00000514110 GSTM2P28161 218 aa11.36□□□□□ -0.59
SNHG4-208ENST00000514110 PTGS2P35354 604 aa11.36□□□□□ -0.59
SNHG4-208ENST00000514110 GGT5P36269 586 aa11.36□□□□□ -0.59
SNHG4-208ENST00000514110 HSPA7P48741 367 aa11.36□□□□□ -0.59
SNHG4-208ENST00000514110 SSR4P51571 173 aa11.36□□□□□ -0.59
SNHG4-208ENST00000514110 LIM2P55344 173 aa11.36□□□□□ -0.59
SNHG4-208ENST00000514110 KRTAP10-9P60411 292 aa11.36□□□□□ -0.59
SNHG4-208ENST00000514110 MRPS25P82663 173 aaKnown RBP11.36□□□□□ -0.59
SNHG4-208ENST00000514110 POU4F1Q01851 419 aa11.36□□□□□ -0.59
SNHG4-208ENST00000514110 CBLBQ13191 982 aa11.36□□□□□ -0.59
SNHG4-208ENST00000514110 DOC2AQ14183 400 aa11.36□□□□□ -0.59
SNHG4-208ENST00000514110 OR4D1Q15615 310 aa11.36□□□□□ -0.59
SNHG4-208ENST00000514110 XKR6Q5GH73 641 aa11.36□□□□□ -0.59
SNHG4-208ENST00000514110 ABHD17CQ6PCB6 329 aa11.36□□□□□ -0.59
SNHG4-208ENST00000514110 CD163Q86VB7 1156 aa11.36□□□□□ -0.59
SNHG4-208ENST00000514110 GPSM1Q86YR5 675 aa11.36□□□□□ -0.59
SNHG4-208ENST00000514110 ZNF595Q8IYB9 648 aa11.36□□□□□ -0.59
SNHG4-208ENST00000514110 MARVELD2Q8N4S9 558 aa11.36□□□□□ -0.59
SNHG4-208ENST00000514110 ZFP62Q8NB50 900 aaPredicted RBP11.36□□□□□ -0.59
SNHG4-208ENST00000514110 OR52N2Q8NGI0 321 aa11.36□□□□□ -0.59
SNHG4-208ENST00000514110 SREK1Q8WXA9 508 aaKnown RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms