RNA–Protein interactions for RNA: ENST00000513989.5

NEDD9-214, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 4

Gene NEDD9, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-214ENST00000513989 SLAMF1Q13291 335 aa9.63□□□□□ -0.87
NEDD9-214ENST00000513989 GALNTL6Q49A17 601 aa9.63□□□□□ -0.87
NEDD9-214ENST00000513989 DEFB134Q4QY38 66 aa9.63□□□□□ -0.87
NEDD9-214ENST00000513989 C6orf15Q6UXA7 325 aaPredicted RBP9.63□□□□□ -0.87
NEDD9-214ENST00000513989 Q6ZSR9 355 aa9.63□□□□□ -0.87
NEDD9-214ENST00000513989 SPATA19Q7Z5L4 167 aa9.63□□□□□ -0.87
NEDD9-214ENST00000513989 NUDT13Q86X67 352 aa9.63□□□□□ -0.87
NEDD9-214ENST00000513989 SPACA3Q8IXA5 215 aa9.63□□□□□ -0.87
NEDD9-214ENST00000513989 RNF175Q8N4F7 328 aa9.63□□□□□ -0.87
NEDD9-214ENST00000513989 FNDC5Q8NAU1 212 aa9.63□□□□□ -0.87
NEDD9-214ENST00000513989 C7orf57Q8NEG2 295 aa9.63□□□□□ -0.87
NEDD9-214ENST00000513989 ZCCHC10Q8TBK6 192 aa9.63□□□□□ -0.87
NEDD9-214ENST00000513989 FGF11Q92914 225 aa9.63□□□□□ -0.87
NEDD9-214ENST00000513989 MMABQ96EY8 250 aaPredicted RBP9.63□□□□□ -0.87
NEDD9-214ENST00000513989 PRR11Q96HE9 360 aaPredicted RBP9.63□□□□□ -0.87
NEDD9-214ENST00000513989 SMIM10Q96HG1 83 aa9.63□□□□□ -0.87
NEDD9-214ENST00000513989 LRFN5Q96NI6 719 aa9.63□□□□□ -0.87
NEDD9-214ENST00000513989 UBL7Q96S82 380 aaPredicted RBP9.63□□□□□ -0.87
NEDD9-214ENST00000513989 CCDC28BQ9BUN5 200 aa9.63□□□□□ -0.87
NEDD9-214ENST00000513989 YIPF2Q9BWQ6 316 aa9.63□□□□□ -0.87
NEDD9-214ENST00000513989 FAM107BQ9H098 131 aa9.63□□□□□ -0.87
NEDD9-214ENST00000513989 TUBB1Q9H4B7 451 aa9.63□□□□□ -0.87
NEDD9-214ENST00000513989 DDX31Q9H8H2 851 aaKnown RBP9.63□□□□□ -0.87
NEDD9-214ENST00000513989 ZNF304Q9HCX3 659 aa9.63□□□□□ -0.87
NEDD9-214ENST00000513989 APMAPQ9HDC9 416 aa9.63□□□□□ -0.87
NEDD9-214ENST00000513989 THSD1Q9NS62 852 aa9.63□□□□□ -0.87
NEDD9-214ENST00000513989 SIRT5Q9NXA8 310 aa9.63□□□□□ -0.87
NEDD9-214ENST00000513989 KLHL14Q9P2G3 628 aa9.63□□□□□ -0.87
NEDD9-214ENST00000513989 GPN3Q9UHW5 284 aaPredicted RBP9.63□□□□□ -0.87
NEDD9-214ENST00000513989 NAALAD2Q9Y3Q0 740 aa9.63□□□□□ -0.87
NEDD9-214ENST00000513989 PCDHGA7Q9Y5G6 932 aa9.63□□□□□ -0.87
NEDD9-214ENST00000513989 SPTA1P02549 2419 aa9.63□□□□□ -0.87
NEDD9-214ENST00000513989 FLNCQ14315 2725 aa9.62□□□□□ -0.87
NEDD9-214ENST00000513989 A0A0A6YYC8 382 aaPredicted RBP9.62□□□□□ -0.87
NEDD9-214ENST00000513989 GOLGA8QA0A0J9YX86 632 aa9.62□□□□□ -0.87
NEDD9-214ENST00000513989 ATP6AP2A0A1C7CYW4 349 aa9.62□□□□□ -0.87
NEDD9-214ENST00000513989 BLACEA4D250 179 aa9.62□□□□□ -0.87
NEDD9-214ENST00000513989 PMS2P1A4D2B8 440 aa9.62□□□□□ -0.87
NEDD9-214ENST00000513989 GOLGA8OA6NCC3 632 aa9.62□□□□□ -0.87
NEDD9-214ENST00000513989 GOLGA8NF8WBI6 632 aa9.62□□□□□ -0.87
NEDD9-214ENST00000513989 H3BMH7 237 aa9.62□□□□□ -0.87
NEDD9-214ENST00000513989 I3L1I5 382 aaPredicted RBP9.62□□□□□ -0.87
NEDD9-214ENST00000513989 MEN1O00255 615 aa9.62□□□□□ -0.87
NEDD9-214ENST00000513989 PLPP1O14494 284 aa9.62□□□□□ -0.87
NEDD9-214ENST00000513989 LSM1O15116 133 aaKnown RBP9.62□□□□□ -0.87
NEDD9-214ENST00000513989 ATXN7O15265 892 aaPredicted RBP9.62□□□□□ -0.87
NEDD9-214ENST00000513989 GALR3O60755 368 aaPredicted RBP9.62□□□□□ -0.87
NEDD9-214ENST00000513989 ATP6AP2O75787 350 aa9.62□□□□□ -0.87
NEDD9-214ENST00000513989 STK17BO94768 372 aa9.62□□□□□ -0.87
NEDD9-214ENST00000513989 KIAA0754O94854 1291 aa9.62□□□□□ -0.87
NEDD9-214ENST00000513989 KLHL18O94889 574 aa9.62□□□□□ -0.87
NEDD9-214ENST00000513989 CTSBP07858 339 aa9.62□□□□□ -0.87
NEDD9-214ENST00000513989 PRPS2P11908 318 aa9.62□□□□□ -0.87
NEDD9-214ENST00000513989 ACPPP15309 386 aa9.62□□□□□ -0.87
NEDD9-214ENST00000513989 ALOX15P16050 662 aaPredicted RBP9.62□□□□□ -0.87
NEDD9-214ENST00000513989 IDH3AP50213 366 aa9.62□□□□□ -0.87
NEDD9-214ENST00000513989 MAPK12P53778 367 aa9.62□□□□□ -0.87
NEDD9-214ENST00000513989 SEC24CP53992 1094 aa9.62□□□□□ -0.87
NEDD9-214ENST00000513989 IRX1P78414 480 aaPredicted RBP9.62□□□□□ -0.87
NEDD9-214ENST00000513989 OCA2Q04671 838 aa9.62□□□□□ -0.87
NEDD9-214ENST00000513989 TBL3Q12788 808 aaKnown RBP9.62□□□□□ -0.87
NEDD9-214ENST00000513989 XKR7Q5GH72 579 aa9.62□□□□□ -0.87
NEDD9-214ENST00000513989 C1orf189Q5VU69 101 aa9.62□□□□□ -0.87
NEDD9-214ENST00000513989 METTL21CQ5VZV1 264 aa9.62□□□□□ -0.87
NEDD9-214ENST00000513989 ADNP2Q6IQ32 1131 aa9.62□□□□□ -0.87
NEDD9-214ENST00000513989 NOXRED1Q6NXP6 359 aa9.62□□□□□ -0.87
NEDD9-214ENST00000513989 GALNT18Q6P9A2 607 aa9.62□□□□□ -0.87
NEDD9-214ENST00000513989 IGF2-ASQ6U949 168 aa9.62□□□□□ -0.87
NEDD9-214ENST00000513989 LARP4Q71RC2 724 aaKnown RBP eCLIP9.62□□□□□ -0.87
NEDD9-214ENST00000513989 COMMD6Q7Z4G1 85 aa9.62□□□□□ -0.87
NEDD9-214ENST00000513989 ZFAND4Q86XD8 727 aa9.62□□□□□ -0.87
NEDD9-214ENST00000513989 ZCCHC7Q8N3Z6 543 aaKnown RBP9.62□□□□□ -0.87
NEDD9-214ENST00000513989 ESX1Q8N693 406 aa9.62□□□□□ -0.87
NEDD9-214ENST00000513989 C1orf52Q8N6N3 182 aaKnown RBP9.62□□□□□ -0.87
NEDD9-214ENST00000513989 ACOT4Q8N9L9 421 aa9.62□□□□□ -0.87
NEDD9-214ENST00000513989 ADAMTS18Q8TE60 1221 aa9.62□□□□□ -0.87
NEDD9-214ENST00000513989 STON2Q8WXE9 905 aa9.62□□□□□ -0.87
NEDD9-214ENST00000513989 APIPQ96GX9 242 aa9.62□□□□□ -0.87
NEDD9-214ENST00000513989 C10orf90Q96M02 699 aa9.62□□□□□ -0.87
NEDD9-214ENST00000513989 C3orf30Q96M34 536 aa9.62□□□□□ -0.87
NEDD9-214ENST00000513989 PRPF18Q99633 342 aaKnown RBP9.62□□□□□ -0.87
NEDD9-214ENST00000513989 ELAC2Q9BQ52 826 aaKnown RBP9.62□□□□□ -0.87
NEDD9-214ENST00000513989 FAIM2Q9BWQ8 316 aa9.62□□□□□ -0.87
NEDD9-214ENST00000513989 MRPL1Q9BYD6 325 aaKnown RBP9.62□□□□□ -0.87
NEDD9-214ENST00000513989 FAM117AQ9C073 453 aa9.62□□□□□ -0.87
NEDD9-214ENST00000513989 WDR55Q9H6Y2 383 aaPredicted RBP9.62□□□□□ -0.87
NEDD9-214ENST00000513989 WDR41Q9HAD4 459 aa9.62□□□□□ -0.87
NEDD9-214ENST00000513989 LYRM4Q9HD34 91 aa9.62□□□□□ -0.87
NEDD9-214ENST00000513989 ASCL3Q9NQ33 180 aa9.62□□□□□ -0.87
NEDD9-214ENST00000513989 TCF7L2Q9NQB0 619 aa9.62□□□□□ -0.87
NEDD9-214ENST00000513989 PRDM7Q9NQW5 492 aa9.62□□□□□ -0.87
NEDD9-214ENST00000513989 LYARQ9NX58 379 aaKnown RBP9.62□□□□□ -0.87
NEDD9-214ENST00000513989 NOP53Q9NZM5 478 aaKnown RBP9.62□□□□□ -0.87
NEDD9-214ENST00000513989 IFT80Q9P2H3 777 aaPredicted RBP9.62□□□□□ -0.87
NEDD9-214ENST00000513989 PHF11Q9UIL8 331 aa9.62□□□□□ -0.87
NEDD9-214ENST00000513989 MCM8Q9UJA3 840 aa9.62□□□□□ -0.87
NEDD9-214ENST00000513989 PSME2Q9UL46 239 aa9.62□□□□□ -0.87
NEDD9-214ENST00000513989 MAPRE3Q9UPY8 281 aa9.62□□□□□ -0.87
NEDD9-214ENST00000513989 CCL27Q9Y4X3 112 aa9.62□□□□□ -0.87
NEDD9-214ENST00000513989 B3GALT1Q9Y5Z6 326 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms