RNA–Protein interactions for RNA: ENST00000513868.6

PVT1-203, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,699 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-203ENST00000513868 ELOVL7A1L3X0 281 aa12.21□□□□□ -0.45
PVT1-203ENST00000513868 P2RX6O15547 441 aa12.21□□□□□ -0.45
PVT1-203ENST00000513868 SH3BP5O60239 455 aa12.21□□□□□ -0.45
PVT1-203ENST00000513868 PIAS2O75928 621 aa12.21□□□□□ -0.45
PVT1-203ENST00000513868 EPN2O95208 641 aa12.21□□□□□ -0.45
PVT1-203ENST00000513868 C6orf47O95873 294 aa12.21□□□□□ -0.45
PVT1-203ENST00000513868 SMIM10L1P0DMW3 83 aa12.21□□□□□ -0.45
PVT1-203ENST00000513868 TYRP1P17643 537 aa12.21□□□□□ -0.45
PVT1-203ENST00000513868 HIST1H1TP22492 207 aaPredicted RBP12.21□□□□□ -0.45
PVT1-203ENST00000513868 ATP5A1P25705 553 aaKnown RBP12.21□□□□□ -0.45
PVT1-203ENST00000513868 SSR2P43308 183 aa12.21□□□□□ -0.45
PVT1-203ENST00000513868 AFF3P51826 1226 aaKnown RBP12.21□□□□□ -0.45
PVT1-203ENST00000513868 WDR45BQ5MNZ6 344 aa12.21□□□□□ -0.45
PVT1-203ENST00000513868 OGFRL1Q5TC84 451 aaPredicted RBP12.21□□□□□ -0.45
PVT1-203ENST00000513868 HMBOX1Q6NT76 420 aa12.21□□□□□ -0.45
PVT1-203ENST00000513868 FAM180BQ6P0A1 224 aa12.21□□□□□ -0.45
PVT1-203ENST00000513868 ASPGQ86U10 573 aa12.21□□□□□ -0.45
PVT1-203ENST00000513868 SERPINA11Q86U17 422 aa12.21□□□□□ -0.45
PVT1-203ENST00000513868 SDR16C5Q8N3Y7 309 aa12.21□□□□□ -0.45
PVT1-203ENST00000513868 ACOT4Q8N9L9 421 aa12.21□□□□□ -0.45
PVT1-203ENST00000513868 PAPD5Q8NDF8 572 aaKnown RBP12.21□□□□□ -0.45
PVT1-203ENST00000513868 OR4A15Q8NGL6 344 aa12.21□□□□□ -0.45
PVT1-203ENST00000513868 OR8K5Q8NH50 307 aa12.21□□□□□ -0.45
PVT1-203ENST00000513868 LRTOMTQ8WZ04 291 aa12.21□□□□□ -0.45
PVT1-203ENST00000513868 FAM120BQ96EK7 910 aaKnown RBP12.21□□□□□ -0.45
PVT1-203ENST00000513868 ZNF764Q96H86 408 aaPredicted RBP12.21□□□□□ -0.45
PVT1-203ENST00000513868 SMIM10Q96HG1 83 aa12.21□□□□□ -0.45
PVT1-203ENST00000513868 NECAB3Q96P71 396 aaPredicted RBP12.21□□□□□ -0.45
PVT1-203ENST00000513868 CHST8Q9H2A9 424 aa12.21□□□□□ -0.45
PVT1-203ENST00000513868 UCK1Q9HA47 277 aa12.21□□□□□ -0.45
PVT1-203ENST00000513868 SLAMF7Q9NQ25 335 aa12.21□□□□□ -0.45
PVT1-203ENST00000513868 MIEF1Q9NQG6 463 aa12.21□□□□□ -0.45
PVT1-203ENST00000513868 POMT2Q9UKY4 750 aa12.21□□□□□ -0.45
PVT1-203ENST00000513868 ASB4Q9Y574 426 aa12.21□□□□□ -0.45
PVT1-203ENST00000513868 LOC105369274A0A096LPK9 316 aa12.2□□□□□ -0.46
PVT1-203ENST00000513868 LOC102723532A0A0G2JNH3 316 aa12.2□□□□□ -0.46
PVT1-203ENST00000513868 A0A0J9YVX5 310 aa12.2□□□□□ -0.46
PVT1-203ENST00000513868 A0A0J9YY10 115 aa12.2□□□□□ -0.46
PVT1-203ENST00000513868 EVPLLA8MZ36 301 aa12.2□□□□□ -0.46
PVT1-203ENST00000513868 SDC3O75056 442 aa12.2□□□□□ -0.46
PVT1-203ENST00000513868 SCELO95171 688 aa12.2□□□□□ -0.46
PVT1-203ENST00000513868 KCNK5O95279 499 aa12.2□□□□□ -0.46
PVT1-203ENST00000513868 GPIP06744 558 aa12.2□□□□□ -0.46
PVT1-203ENST00000513868 FAM58BPP0C7Q3 252 aa12.2□□□□□ -0.46
PVT1-203ENST00000513868 FRKP42685 505 aaPredicted RBP12.2□□□□□ -0.46
PVT1-203ENST00000513868 TSFMP43897 325 aaKnown RBP12.2□□□□□ -0.46
PVT1-203ENST00000513868 MVDP53602 400 aa12.2□□□□□ -0.46
PVT1-203ENST00000513868 POLE2P56282 527 aa12.2□□□□□ -0.46
PVT1-203ENST00000513868 PCBP4P57723 403 aaKnown RBP12.2□□□□□ -0.46
PVT1-203ENST00000513868 RAB8AP61006 207 aa12.2□□□□□ -0.46
PVT1-203ENST00000513868 STXBP1P61764 594 aaKnown RBP12.2□□□□□ -0.46
PVT1-203ENST00000513868 SIM2Q14190 667 aaPredicted RBP12.2□□□□□ -0.46
PVT1-203ENST00000513868 HEPACAMQ14CZ8 416 aa12.2□□□□□ -0.46
PVT1-203ENST00000513868 TRIP10Q15642 601 aa12.2□□□□□ -0.46
PVT1-203ENST00000513868 ADRM1Q16186 407 aa12.2□□□□□ -0.46
PVT1-203ENST00000513868 CYP51A1Q16850 503 aa12.2□□□□□ -0.46
PVT1-203ENST00000513868 LRRC36Q1X8D7 754 aa12.2□□□□□ -0.46
PVT1-203ENST00000513868 DEFB133Q30KQ1 61 aa12.2□□□□□ -0.46
PVT1-203ENST00000513868 FRMPD2BQ6IN97 320 aa12.2□□□□□ -0.46
PVT1-203ENST00000513868 TRIM40Q6P9F5 258 aa12.2□□□□□ -0.46
PVT1-203ENST00000513868 RNF44Q7L0R7 432 aa12.2□□□□□ -0.46
PVT1-203ENST00000513868 OOSP2Q86WS3 158 aa12.2□□□□□ -0.46
PVT1-203ENST00000513868 TMEM126BQ8IUX1 230 aa12.2□□□□□ -0.46
PVT1-203ENST00000513868 MAML2Q8IZL2 1156 aaPredicted RBP12.2□□□□□ -0.46
PVT1-203ENST00000513868 OR4N4Q8N0Y3 316 aa12.2□□□□□ -0.46
PVT1-203ENST00000513868 ZCCHC7Q8N3Z6 543 aaKnown RBP12.2□□□□□ -0.46
PVT1-203ENST00000513868 OR52E4Q8NGH9 312 aa12.2□□□□□ -0.46
PVT1-203ENST00000513868 UTP15Q8TED0 518 aaKnown RBP12.2□□□□□ -0.46
PVT1-203ENST00000513868 REXO5Q96IC2 774 aaKnown RBP12.2□□□□□ -0.46
PVT1-203ENST00000513868 GPATCH2Q9NW75 528 aa12.2□□□□□ -0.46
PVT1-203ENST00000513868 TAS2R9Q9NYW1 312 aa12.2□□□□□ -0.46
PVT1-203ENST00000513868 TAS2R7Q9NYW3 318 aa12.2□□□□□ -0.46
PVT1-203ENST00000513868 C5AR2Q9P296 337 aa12.2□□□□□ -0.46
PVT1-203ENST00000513868 VPS4AQ9UN37 437 aa12.2□□□□□ -0.46
PVT1-203ENST00000513868 RP1P56715 2156 aa12.2□□□□□ -0.46
PVT1-203ENST00000513868 UNC13CQ8NB66 2214 aa12.2□□□□□ -0.46
PVT1-203ENST00000513868 A0A1B0GVT2 93 aa12.19□□□□□ -0.46
PVT1-203ENST00000513868 A0A1W2PR48 441 aa12.19□□□□□ -0.46
PVT1-203ENST00000513868 A0A1W2PRB8 838 aa12.19□□□□□ -0.46
PVT1-203ENST00000513868 WASHC1A8K0Z3 465 aa12.19□□□□□ -0.46
PVT1-203ENST00000513868 CXCR6O00574 342 aa12.19□□□□□ -0.46
PVT1-203ENST00000513868 TIPRLO75663 272 aa12.19□□□□□ -0.46
PVT1-203ENST00000513868 ANXA6P08133 673 aa12.19□□□□□ -0.46
PVT1-203ENST00000513868 ABCB1P08183 1280 aaPredicted RBP12.19□□□□□ -0.46
PVT1-203ENST00000513868 UMPSP11172 480 aa12.19□□□□□ -0.46
PVT1-203ENST00000513868 CERS1P27544 350 aa12.19□□□□□ -0.46
PVT1-203ENST00000513868 C21orf59P57076 290 aa12.19□□□□□ -0.46
PVT1-203ENST00000513868 BNC1Q01954 994 aa12.19□□□□□ -0.46
PVT1-203ENST00000513868 SRSF5Q13243 272 aaKnown RBP12.19□□□□□ -0.46
PVT1-203ENST00000513868 SLAMF1Q13291 335 aa12.19□□□□□ -0.46
PVT1-203ENST00000513868 SLC9A5Q14940 896 aa12.19□□□□□ -0.46
PVT1-203ENST00000513868 C16orf72Q14CZ0 275 aa12.19□□□□□ -0.46
PVT1-203ENST00000513868 NDUFAF5Q5TEU4 345 aa12.19□□□□□ -0.46
PVT1-203ENST00000513868 WDR5BQ86VZ2 330 aa12.19□□□□□ -0.46
PVT1-203ENST00000513868 PTOV1Q86YD1 416 aa12.19□□□□□ -0.46
PVT1-203ENST00000513868 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.19□□□□□ -0.46
PVT1-203ENST00000513868 SRFBP1Q8NEF9 429 aaKnown RBP12.19□□□□□ -0.46
PVT1-203ENST00000513868 TNIP2Q8NFZ5 429 aa12.19□□□□□ -0.46
PVT1-203ENST00000513868 PNPT1Q8TCS8 783 aaKnown RBP12.19□□□□□ -0.46
PVT1-203ENST00000513868 DNAJC9Q8WXX5 260 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms