RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 NSMCE3Q96MG7 304 aa3.47□□□□□ -1.85
PDLIM5-218ENST00000513341 GPR137Q96N19 417 aa3.47□□□□□ -1.85
PDLIM5-218ENST00000513341 GSDMAQ96QA5 445 aa3.47□□□□□ -1.85
PDLIM5-218ENST00000513341 WDR24Q96S15 920 aa3.47□□□□□ -1.85
PDLIM5-218ENST00000513341 SMR3AQ99954 134 aa3.47□□□□□ -1.85
PDLIM5-218ENST00000513341 ZSCAN5AQ9BUG6 496 aa3.47□□□□□ -1.85
PDLIM5-218ENST00000513341 POLDIP3Q9BY77 421 aaKnown RBP3.47□□□□□ -1.85
PDLIM5-218ENST00000513341 TRIM54Q9BYV2 358 aa3.47□□□□□ -1.85
PDLIM5-218ENST00000513341 PITPNM3Q9BZ71 974 aa3.47□□□□□ -1.85
PDLIM5-218ENST00000513341 MAGEB5Q9BZ81 275 aa3.47□□□□□ -1.85
PDLIM5-218ENST00000513341 SLC39A8Q9C0K1 460 aa3.47□□□□□ -1.85
PDLIM5-218ENST00000513341 OR2AG1Q9H205 316 aa3.47□□□□□ -1.85
PDLIM5-218ENST00000513341 SLC26A1Q9H2B4 701 aa3.47□□□□□ -1.85
PDLIM5-218ENST00000513341 OSGEPL1Q9H4B0 414 aa3.47□□□□□ -1.85
PDLIM5-218ENST00000513341 ZMAT3Q9HA38 289 aaKnown RBP3.47□□□□□ -1.85
PDLIM5-218ENST00000513341 SOHLH2Q9NX45 425 aa3.47□□□□□ -1.85
PDLIM5-218ENST00000513341 PKD2L2Q9NZM6 624 aa3.47□□□□□ -1.85
PDLIM5-218ENST00000513341 IL1RAPL1Q9NZN1 696 aa3.47□□□□□ -1.85
PDLIM5-218ENST00000513341 SLC23A2Q9UGH3 650 aa3.47□□□□□ -1.85
PDLIM5-218ENST00000513341 CD84Q9UIB8 345 aa3.47□□□□□ -1.85
PDLIM5-218ENST00000513341 FBXL4Q9UKA2 621 aa3.47□□□□□ -1.85
PDLIM5-218ENST00000513341 NXT1Q9UKK6 140 aaKnown RBP3.47□□□□□ -1.85
PDLIM5-218ENST00000513341 ACSL5Q9ULC5 683 aa3.47□□□□□ -1.85
PDLIM5-218ENST00000513341 COLEC10Q9Y6Z7 277 aa3.47□□□□□ -1.85
PDLIM5-218ENST00000513341 AKAP6Q13023 2319 aa3.47□□□□□ -1.85
PDLIM5-218ENST00000513341 FAM237BA0A1B0GVD1 139 aa3.46□□□□□ -1.86
PDLIM5-218ENST00000513341 A0A1B0GVL5 298 aa3.46□□□□□ -1.86
PDLIM5-218ENST00000513341 A0A1W2PQ72 361 aa3.46□□□□□ -1.86
PDLIM5-218ENST00000513341 GSAPA4D1B5 854 aa3.46□□□□□ -1.86
PDLIM5-218ENST00000513341 GTPBP10A4D1E9 387 aaKnown RBP3.46□□□□□ -1.86
PDLIM5-218ENST00000513341 CD8B2A6NJW9 211 aa3.46□□□□□ -1.86
PDLIM5-218ENST00000513341 RNF212BA8MTL3 300 aa3.46□□□□□ -1.86
PDLIM5-218ENST00000513341 ANKRD66B4E2M5 251 aa3.46□□□□□ -1.86
PDLIM5-218ENST00000513341 TMEM150CB9EJG8 249 aa3.46□□□□□ -1.86
PDLIM5-218ENST00000513341 H3BMH7 237 aa3.46□□□□□ -1.86
PDLIM5-218ENST00000513341 MYO1CO00159 1063 aa3.46□□□□□ -1.86
PDLIM5-218ENST00000513341 ADAM10O14672 748 aa3.46□□□□□ -1.86
PDLIM5-218ENST00000513341 ASNA1O43681 348 aa3.46□□□□□ -1.86
PDLIM5-218ENST00000513341 KLK8O60259 260 aa3.46□□□□□ -1.86
PDLIM5-218ENST00000513341 OR2B3O76000 313 aa3.46□□□□□ -1.86
PDLIM5-218ENST00000513341 TOXO94900 526 aa3.46□□□□□ -1.86
PDLIM5-218ENST00000513341 BMP10O95393 424 aa3.46□□□□□ -1.86
PDLIM5-218ENST00000513341 LCA5LO95447 670 aa3.46□□□□□ -1.86
PDLIM5-218ENST00000513341 CLDN7O95471 211 aa3.46□□□□□ -1.86
PDLIM5-218ENST00000513341 TSPAN12O95859 305 aa3.46□□□□□ -1.86
PDLIM5-218ENST00000513341 HPP00738 406 aa3.46□□□□□ -1.86
PDLIM5-218ENST00000513341 AHSGP02765 367 aa3.46□□□□□ -1.86
PDLIM5-218ENST00000513341 RAF1P04049 648 aa3.46□□□□□ -1.86
PDLIM5-218ENST00000513341 SERPINA7P05543 415 aa3.46□□□□□ -1.86
PDLIM5-218ENST00000513341 PDHA1P08559 390 aa3.46□□□□□ -1.86
PDLIM5-218ENST00000513341 KRT3P12035 628 aa3.46□□□□□ -1.86
PDLIM5-218ENST00000513341 PFKFB1P16118 471 aa3.46□□□□□ -1.86
PDLIM5-218ENST00000513341 NDUFB7P17568 137 aa3.46□□□□□ -1.86
PDLIM5-218ENST00000513341 CDH3P22223 829 aa3.46□□□□□ -1.86
PDLIM5-218ENST00000513341 CA4P22748 312 aa3.46□□□□□ -1.86
PDLIM5-218ENST00000513341 PRDX3P30048 256 aaKnown RBP3.46□□□□□ -1.86
PDLIM5-218ENST00000513341 SLC7A1P30825 629 aa3.46□□□□□ -1.86
PDLIM5-218ENST00000513341 CHRNB4P30926 498 aa3.46□□□□□ -1.86
PDLIM5-218ENST00000513341 SYKP43405 635 aa3.46□□□□□ -1.86
PDLIM5-218ENST00000513341 ARFIP2P53365 341 aa3.46□□□□□ -1.86
PDLIM5-218ENST00000513341 DRG2P55039 364 aaKnown RBP3.46□□□□□ -1.86
PDLIM5-218ENST00000513341 CDH6P55285 790 aa3.46□□□□□ -1.86
PDLIM5-218ENST00000513341 WNT3P56703 355 aa3.46□□□□□ -1.86
PDLIM5-218ENST00000513341 PPP1CAP62136 330 aa3.46□□□□□ -1.86
PDLIM5-218ENST00000513341 TFF3Q07654 80 aa3.46□□□□□ -1.86
PDLIM5-218ENST00000513341 AP1B1Q10567 949 aa3.46□□□□□ -1.86
PDLIM5-218ENST00000513341 TMEM115Q12893 351 aaPredicted RBP3.46□□□□□ -1.86
PDLIM5-218ENST00000513341 TRAF2Q12933 501 aa3.46□□□□□ -1.86
PDLIM5-218ENST00000513341 MYBPHQ13203 477 aa3.46□□□□□ -1.86
PDLIM5-218ENST00000513341 STIM1Q13586 685 aa3.46□□□□□ -1.86
PDLIM5-218ENST00000513341 RAB32Q13637 225 aa3.46□□□□□ -1.86
PDLIM5-218ENST00000513341 RPE65Q16518 533 aa3.46□□□□□ -1.86
PDLIM5-218ENST00000513341 CDO1Q16878 200 aa3.46□□□□□ -1.86
PDLIM5-218ENST00000513341 C15orf59Q2T9L4 293 aaPredicted RBP3.46□□□□□ -1.86
PDLIM5-218ENST00000513341 DEFB113Q30KQ7 82 aa3.46□□□□□ -1.86
PDLIM5-218ENST00000513341 CCDC40Q4G0X9 1142 aa3.46□□□□□ -1.86
PDLIM5-218ENST00000513341 TDRD12Q587J7 1177 aaKnown RBP3.46□□□□□ -1.86
PDLIM5-218ENST00000513341 MARC1Q5VT66 337 aa3.46□□□□□ -1.86
PDLIM5-218ENST00000513341 FBXO38Q6PIJ6 1188 aa3.46□□□□□ -1.86
PDLIM5-218ENST00000513341 PRSS57Q6UWY2 283 aa3.46□□□□□ -1.86
PDLIM5-218ENST00000513341 GBP6Q6ZN66 633 aa3.46□□□□□ -1.86
PDLIM5-218ENST00000513341 RFLNAQ6ZTI6 216 aa3.46□□□□□ -1.86
PDLIM5-218ENST00000513341 NDUFAF7Q7L592 441 aa3.46□□□□□ -1.86
PDLIM5-218ENST00000513341 ADGRG6Q86SQ4 1221 aa3.46□□□□□ -1.86
PDLIM5-218ENST00000513341 AMZ2Q86W34 360 aa3.46□□□□□ -1.86
PDLIM5-218ENST00000513341 ZNF677Q86XU0 584 aa3.46□□□□□ -1.86
PDLIM5-218ENST00000513341 LRRC49Q8IUZ0 686 aa3.46□□□□□ -1.86
PDLIM5-218ENST00000513341 PSTKQ8IV42 348 aaKnown RBP3.46□□□□□ -1.86
PDLIM5-218ENST00000513341 FAM71AQ8IYT1 594 aa3.46□□□□□ -1.86
PDLIM5-218ENST00000513341 TRAM1L1Q8N609 369 aa3.46□□□□□ -1.86
PDLIM5-218ENST00000513341 CCDC185Q8N715 623 aa3.46□□□□□ -1.86
PDLIM5-218ENST00000513341 EMC1Q8N766 993 aa3.46□□□□□ -1.86
PDLIM5-218ENST00000513341 WFDC11Q8NEX6 87 aa3.46□□□□□ -1.86
PDLIM5-218ENST00000513341 OR11G2Q8NGC1 345 aa3.46□□□□□ -1.86
PDLIM5-218ENST00000513341 AGAP11Q8TF27 550 aa3.46□□□□□ -1.86
PDLIM5-218ENST00000513341 FAM172AQ8WUF8 416 aa3.46□□□□□ -1.86
PDLIM5-218ENST00000513341 NRGNQ92686 78 aa3.46□□□□□ -1.86
PDLIM5-218ENST00000513341 RMND5BQ96G75 393 aaPredicted RBP3.46□□□□□ -1.86
PDLIM5-218ENST00000513341 VPS35Q96QK1 796 aa3.46□□□□□ -1.86
PDLIM5-218ENST00000513341 TRIB1Q96RU8 372 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms