RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 UBFD1O14562 309 aaKnown RBP8.62□□□□□ -1.03
VCAN-208ENST00000512590 EI24O14681 340 aa8.62□□□□□ -1.03
VCAN-208ENST00000512590 NPC1O15118 1278 aa8.62□□□□□ -1.03
VCAN-208ENST00000512590 H6PDO95479 791 aa8.62□□□□□ -1.03
VCAN-208ENST00000512590 HMGN1P05114 100 aa8.62□□□□□ -1.03
VCAN-208ENST00000512590 HOXB6P17509 224 aaKnown RBP8.62□□□□□ -1.03
VCAN-208ENST00000512590 MAPK7Q13164 816 aa8.62□□□□□ -1.03
VCAN-208ENST00000512590 ADGRF1Q5T601 910 aa8.62□□□□□ -1.03
VCAN-208ENST00000512590 KIAA1161Q6NSJ0 714 aa8.62□□□□□ -1.03
VCAN-208ENST00000512590 LINC00696Q6ZRV3 163 aa8.62□□□□□ -1.03
VCAN-208ENST00000512590 TUSC5Q8IXB3 177 aa8.62□□□□□ -1.03
VCAN-208ENST00000512590 KLHL36Q8N4N3 616 aa8.62□□□□□ -1.03
VCAN-208ENST00000512590 SLC35F5Q8WV83 523 aa8.62□□□□□ -1.03
VCAN-208ENST00000512590 UBE2FQ969M7 185 aa8.62□□□□□ -1.03
VCAN-208ENST00000512590 KLRG1Q96E93 195 aa8.62□□□□□ -1.03
VCAN-208ENST00000512590 ZC3H10Q96K80 434 aaKnown RBP8.62□□□□□ -1.03
VCAN-208ENST00000512590 CDC6Q99741 560 aa8.62□□□□□ -1.03
VCAN-208ENST00000512590 RNF32Q9H0A6 362 aa8.62□□□□□ -1.03
VCAN-208ENST00000512590 MED28Q9H204 178 aa8.62□□□□□ -1.03
VCAN-208ENST00000512590 AGPAT5Q9NUQ2 364 aa8.62□□□□□ -1.03
VCAN-208ENST00000512590 TVP23BQ9NYZ1 205 aa8.62□□□□□ -1.03
VCAN-208ENST00000512590 DLGAP2Q9P1A6 1054 aa8.62□□□□□ -1.03
VCAN-208ENST00000512590 EPHA6Q9UF33 1036 aa8.62□□□□□ -1.03
VCAN-208ENST00000512590 INSL5Q9Y5Q6 135 aa8.62□□□□□ -1.03
VCAN-208ENST00000512590 CLASP1Q7Z460 1538 aa8.62□□□□□ -1.03
VCAN-208ENST00000512590 SMIM28A0A1B0GU29 152 aa8.62□□□□□ -1.03
VCAN-208ENST00000512590 A0A1W2PQJ5 194 aa8.62□□□□□ -1.03
VCAN-208ENST00000512590 AGAP5A6NIR3 686 aa8.62□□□□□ -1.03
VCAN-208ENST00000512590 YY2O15391 372 aa8.62□□□□□ -1.03
VCAN-208ENST00000512590 DCXO43602 365 aa8.62□□□□□ -1.03
VCAN-208ENST00000512590 GADD45GO95257 159 aa8.62□□□□□ -1.03
VCAN-208ENST00000512590 COL6A2P12110 1019 aa8.62□□□□□ -1.03
VCAN-208ENST00000512590 CYP3A5P20815 502 aa8.62□□□□□ -1.03
VCAN-208ENST00000512590 SFTPDP35247 375 aa8.62□□□□□ -1.03
VCAN-208ENST00000512590 BIDP55957 195 aa8.62□□□□□ -1.03
VCAN-208ENST00000512590 CDK3Q00526 305 aa8.62□□□□□ -1.03
VCAN-208ENST00000512590 NECTIN1Q15223 517 aa8.62□□□□□ -1.03
VCAN-208ENST00000512590 CCL14Q16627 93 aa8.62□□□□□ -1.03
VCAN-208ENST00000512590 EIF5AL1Q6IS14 154 aaKnown RBP8.62□□□□□ -1.03
VCAN-208ENST00000512590 METTL4Q8N3J2 472 aa8.62□□□□□ -1.03
VCAN-208ENST00000512590 NATD1Q8N6N6 113 aa8.62□□□□□ -1.03
VCAN-208ENST00000512590 FAM83FQ8NEG4 500 aaPredicted RBP8.62□□□□□ -1.03
VCAN-208ENST00000512590 IL17RDQ8NFM7 739 aa8.62□□□□□ -1.03
VCAN-208ENST00000512590 TAAR8Q969N4 342 aa8.62□□□□□ -1.03
VCAN-208ENST00000512590 RHBDF1Q96CC6 855 aa8.62□□□□□ -1.03
VCAN-208ENST00000512590 PIWIL1Q96J94 861 aaKnown RBP8.62□□□□□ -1.03
VCAN-208ENST00000512590 TMEM43Q9BTV4 400 aa8.62□□□□□ -1.03
VCAN-208ENST00000512590 TEX51A0A1B0GUA7 166 aa8.62□□□□□ -1.03
VCAN-208ENST00000512590 FAM240BA0A1B0GVZ2 78 aa8.62□□□□□ -1.03
VCAN-208ENST00000512590 FLRT2O43155 660 aa8.62□□□□□ -1.03
VCAN-208ENST00000512590 PRKD3O94806 890 aa8.62□□□□□ -1.03
VCAN-208ENST00000512590 MAGEA8P43361 318 aa8.62□□□□□ -1.03
VCAN-208ENST00000512590 MAZP56270 477 aaKnown RBP8.62□□□□□ -1.03
VCAN-208ENST00000512590 GRB10Q13322 594 aa8.62□□□□□ -1.03
VCAN-208ENST00000512590 RUNX3Q13761 415 aa8.62□□□□□ -1.03
VCAN-208ENST00000512590 LTC4SQ16873 150 aa8.62□□□□□ -1.03
VCAN-208ENST00000512590 DEFB109BQ30KR1 87 aa8.62□□□□□ -1.03
VCAN-208ENST00000512590 RNASE10Q5GAN6 216 aaKnown RBP8.62□□□□□ -1.03
VCAN-208ENST00000512590 CREB3L2Q70SY1 520 aa8.62□□□□□ -1.03
VCAN-208ENST00000512590 ASPGQ86U10 573 aa8.62□□□□□ -1.03
VCAN-208ENST00000512590 MREGQ8N565 214 aa8.62□□□□□ -1.03
VCAN-208ENST00000512590 RBMXL3Q8N7X1 1067 aaKnown RBP8.62□□□□□ -1.03
VCAN-208ENST00000512590 OR56A1Q8NGH5 318 aa8.62□□□□□ -1.03
VCAN-208ENST00000512590 ARRDC3Q96B67 414 aa8.62□□□□□ -1.03
VCAN-208ENST00000512590 SDSLQ96GA7 329 aa8.62□□□□□ -1.03
VCAN-208ENST00000512590 OR5B12Q96R08 314 aa8.62□□□□□ -1.03
VCAN-208ENST00000512590 URM1Q9BTM9 101 aaKnown RBP8.62□□□□□ -1.03
VCAN-208ENST00000512590 DOHHQ9BU89 302 aa8.62□□□□□ -1.03
VCAN-208ENST00000512590 SLC6A16Q9GZN6 736 aa8.62□□□□□ -1.03
VCAN-208ENST00000512590 TPK1Q9H3S4 243 aa8.62□□□□□ -1.03
VCAN-208ENST00000512590 FBXO5Q9UKT4 447 aa8.62□□□□□ -1.03
VCAN-208ENST00000512590 MAGEB17A8MXT2 336 aa8.61□□□□□ -1.03
VCAN-208ENST00000512590 B4GALT5O43286 388 aa8.61□□□□□ -1.03
VCAN-208ENST00000512590 RNH1P13489 461 aaKnown RBP8.61□□□□□ -1.03
VCAN-208ENST00000512590 GSTM3P21266 225 aa8.61□□□□□ -1.03
VCAN-208ENST00000512590 FXYD6P3P58550 94 aa8.61□□□□□ -1.03
VCAN-208ENST00000512590 PSMA6P60900 246 aaKnown RBP8.61□□□□□ -1.03
VCAN-208ENST00000512590 CSNK2A1P68400 391 aaPredicted RBP8.61□□□□□ -1.03
VCAN-208ENST00000512590 CDK16Q00536 496 aa8.61□□□□□ -1.03
VCAN-208ENST00000512590 CLCQ05315 142 aa8.61□□□□□ -1.03
VCAN-208ENST00000512590 MAMLD1Q13495 774 aa8.61□□□□□ -1.03
VCAN-208ENST00000512590 ARHGAP19Q14CB8 494 aa8.61□□□□□ -1.03
VCAN-208ENST00000512590 HERC3Q15034 1050 aa8.61□□□□□ -1.03
VCAN-208ENST00000512590 PAN3Q58A45 887 aaKnown RBP8.61□□□□□ -1.03
VCAN-208ENST00000512590 CLEC12AQ5QGZ9 265 aa8.61□□□□□ -1.03
VCAN-208ENST00000512590 GALNT12Q8IXK2 581 aa8.61□□□□□ -1.03
VCAN-208ENST00000512590 MARVELD2Q8N4S9 558 aa8.61□□□□□ -1.03
VCAN-208ENST00000512590 CSNK1A1LQ8N752 337 aa8.61□□□□□ -1.03
VCAN-208ENST00000512590 BBS1Q8NFJ9 593 aa8.61□□□□□ -1.03
VCAN-208ENST00000512590 BBS10Q8TAM1 723 aa8.61□□□□□ -1.03
VCAN-208ENST00000512590 CD300LFQ8TDQ1 290 aa8.61□□□□□ -1.03
VCAN-208ENST00000512590 NKX3-1Q99801 234 aaPredicted RBP8.61□□□□□ -1.03
VCAN-208ENST00000512590 MED18Q9BUE0 208 aa8.61□□□□□ -1.03
VCAN-208ENST00000512590 RBM12Q9NTZ6 932 aaKnown RBP8.61□□□□□ -1.03
VCAN-208ENST00000512590 RCOR3Q9P2K3 495 aaPredicted RBP8.61□□□□□ -1.03
VCAN-208ENST00000512590 AASSQ9UDR5 926 aa8.61□□□□□ -1.03
VCAN-208ENST00000512590 ABCG2Q9UNQ0 655 aa8.61□□□□□ -1.03
VCAN-208ENST00000512590 KCNU1A8MYU2 1149 aa8.61□□□□□ -1.03
VCAN-208ENST00000512590 RNASEK-C17orf49H0YIS7 233 aa8.61□□□□□ -1.03
VCAN-208ENST00000512590 VILLO15195 856 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms