RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 LCA5Q86VQ0 697 aa13.14□□□□□ -0.31
DDX41-212ENST00000511040 C4orf33Q8N1A6 199 aa13.14□□□□□ -0.31
DDX41-212ENST00000511040 SIRT6Q8N6T7 355 aa13.14□□□□□ -0.31
DDX41-212ENST00000511040 L3MBTL4Q8NA19 623 aa13.14□□□□□ -0.31
DDX41-212ENST00000511040 TMEM52Q8NDY8 209 aa13.14□□□□□ -0.31
DDX41-212ENST00000511040 PLPP5Q8NEB5 264 aa13.14□□□□□ -0.31
DDX41-212ENST00000511040 BRIX1Q8TDN6 353 aaKnown RBP13.14□□□□□ -0.31
DDX41-212ENST00000511040 PPP4R1Q8TF05 950 aa13.14□□□□□ -0.31
DDX41-212ENST00000511040 CAVIN3Q969G5 261 aa13.14□□□□□ -0.31
DDX41-212ENST00000511040 CMTM7Q96FZ5 175 aa13.14□□□□□ -0.31
DDX41-212ENST00000511040 IMMP1LQ96LU5 166 aa13.14□□□□□ -0.31
DDX41-212ENST00000511040 PTCHD1Q96NR3 888 aa13.14□□□□□ -0.31
DDX41-212ENST00000511040 AGAP4Q96P64 663 aa13.14□□□□□ -0.31
DDX41-212ENST00000511040 KCNC2Q96PR1 638 aa13.14□□□□□ -0.31
DDX41-212ENST00000511040 TMEM237Q96Q45 408 aa13.14□□□□□ -0.31
DDX41-212ENST00000511040 SERINC2Q96SA4 455 aa13.14□□□□□ -0.31
DDX41-212ENST00000511040 CSF3RQ99062 836 aa13.14□□□□□ -0.31
DDX41-212ENST00000511040 WDR77Q9BQA1 342 aaPredicted RBP13.14□□□□□ -0.31
DDX41-212ENST00000511040 ERVK-6Q9BXR3 956 aa13.14□□□□□ -0.31
DDX41-212ENST00000511040 PPCSQ9HAB8 311 aa13.14□□□□□ -0.31
DDX41-212ENST00000511040 CLK4Q9HAZ1 481 aaKnown RBP13.14□□□□□ -0.31
DDX41-212ENST00000511040 NECTIN3Q9NQS3 549 aa13.14□□□□□ -0.31
DDX41-212ENST00000511040 PTGFRNQ9P2B2 879 aa13.14□□□□□ -0.31
DDX41-212ENST00000511040 C19orf25Q9UFG5 118 aaPredicted RBP13.14□□□□□ -0.31
DDX41-212ENST00000511040 DCDC2Q9UHG0 476 aa13.14□□□□□ -0.31
DDX41-212ENST00000511040 ANAPC2Q9UJX6 822 aa13.14□□□□□ -0.31
DDX41-212ENST00000511040 PCDHGB7Q9Y5F8 929 aa13.14□□□□□ -0.31
DDX41-212ENST00000511040 PCDHGA11Q9Y5H2 935 aa13.14□□□□□ -0.31
DDX41-212ENST00000511040 SPTA1P02549 2419 aa13.14□□□□□ -0.31
DDX41-212ENST00000511040 MYOCOSA0A1B0GUC4 107 aa13.13□□□□□ -0.31
DDX41-212ENST00000511040 A8MUA0 341 aa13.13□□□□□ -0.31
DDX41-212ENST00000511040 H0YIV9 168 aa13.13□□□□□ -0.31
DDX41-212ENST00000511040 PCDH17O14917 1159 aa13.13□□□□□ -0.31
DDX41-212ENST00000511040 UGDHO60701 494 aa13.13□□□□□ -0.31
DDX41-212ENST00000511040 CDH16O75309 829 aa13.13□□□□□ -0.31
DDX41-212ENST00000511040 GLRA3O75311 464 aa13.13□□□□□ -0.31
DDX41-212ENST00000511040 SUPT7LO94864 414 aa13.13□□□□□ -0.31
DDX41-212ENST00000511040 SERPINA7P05543 415 aa13.13□□□□□ -0.31
DDX41-212ENST00000511040 CYC1P08574 325 aa13.13□□□□□ -0.31
DDX41-212ENST00000511040 ATP5F1P24539 256 aaPredicted RBP13.13□□□□□ -0.31
DDX41-212ENST00000511040 ATP5A1P25705 553 aaKnown RBP13.13□□□□□ -0.31
DDX41-212ENST00000511040 CASRP41180 1078 aa13.13□□□□□ -0.31
DDX41-212ENST00000511040 PIK3CBP42338 1070 aa13.13□□□□□ -0.31
DDX41-212ENST00000511040 SSR2P43308 183 aa13.13□□□□□ -0.31
DDX41-212ENST00000511040 RAP1GDS1P52306 607 aa13.13□□□□□ -0.31
DDX41-212ENST00000511040 LIM2P55344 173 aa13.13□□□□□ -0.31
DDX41-212ENST00000511040 RAB38P57729 211 aa13.13□□□□□ -0.31
DDX41-212ENST00000511040 TLE1Q04724 770 aa13.13□□□□□ -0.31
DDX41-212ENST00000511040 IFFO1Q0D2I5 559 aa13.13□□□□□ -0.31
DDX41-212ENST00000511040 AP5B1Q2VPB7 878 aa13.13□□□□□ -0.31
DDX41-212ENST00000511040 BTBD16Q32M84 506 aa13.13□□□□□ -0.31
DDX41-212ENST00000511040 DEPDC1Q5TB30 811 aa13.13□□□□□ -0.31
DDX41-212ENST00000511040 TTC19Q6DKK2 380 aaPredicted RBP13.13□□□□□ -0.31
DDX41-212ENST00000511040 LETMD1Q6P1Q0 360 aa13.13□□□□□ -0.31
DDX41-212ENST00000511040 PAPD4Q6PIY7 484 aaKnown RBP13.13□□□□□ -0.31
DDX41-212ENST00000511040 CHSY3Q70JA7 882 aa13.13□□□□□ -0.31
DDX41-212ENST00000511040 MILR1Q7Z6M3 343 aa13.13□□□□□ -0.31
DDX41-212ENST00000511040 CLNKQ7Z7G1 428 aa13.13□□□□□ -0.31
DDX41-212ENST00000511040 ACOT4Q8N9L9 421 aa13.13□□□□□ -0.31
DDX41-212ENST00000511040 OR4F6Q8NGB9 312 aa13.13□□□□□ -0.31
DDX41-212ENST00000511040 TRPC4APQ8TEL6 797 aa13.13□□□□□ -0.31
DDX41-212ENST00000511040 ZBTB9Q96C00 473 aa13.13□□□□□ -0.31
DDX41-212ENST00000511040 REPS1Q96D71 796 aa13.13□□□□□ -0.31
DDX41-212ENST00000511040 MAPKAP1Q9BPZ7 522 aa13.13□□□□□ -0.31
DDX41-212ENST00000511040 TBCDQ9BTW9 1192 aa13.13□□□□□ -0.31
DDX41-212ENST00000511040 TUBB6Q9BUF5 446 aa13.13□□□□□ -0.31
DDX41-212ENST00000511040 NPLQ9BXD5 320 aaPredicted RBP13.13□□□□□ -0.31
DDX41-212ENST00000511040 PRDM9Q9NQV7 894 aa13.13□□□□□ -0.31
DDX41-212ENST00000511040 C5AR2Q9P296 337 aa13.13□□□□□ -0.31
DDX41-212ENST00000511040 ADGRE2Q9UHX3 823 aa13.13□□□□□ -0.31
DDX41-212ENST00000511040 CSAG2Q9Y5P2 127 aa13.13□□□□□ -0.31
DDX41-212ENST00000511040 ZNF462Q96JM2 2506 aa13.13□□□□□ -0.31
DDX41-212ENST00000511040 ETHE1O95571 254 aa13.12□□□□□ -0.31
DDX41-212ENST00000511040 PROCP04070 461 aa13.12□□□□□ -0.31
DDX41-212ENST00000511040 UQCRHP07919 91 aa13.12□□□□□ -0.31
DDX41-212ENST00000511040 NUDT17P0C025 328 aa13.12□□□□□ -0.31
DDX41-212ENST00000511040 KRT4P19013 534 aa13.12□□□□□ -0.31
DDX41-212ENST00000511040 HIST1H1TP22492 207 aaPredicted RBP13.12□□□□□ -0.31
DDX41-212ENST00000511040 PRKAA2P54646 552 aa13.12□□□□□ -0.31
DDX41-212ENST00000511040 MLLT10P55197 1068 aa13.12□□□□□ -0.31
DDX41-212ENST00000511040 PHEXP78562 749 aa13.12□□□□□ -0.31
DDX41-212ENST00000511040 CLCQ05315 142 aa13.12□□□□□ -0.31
DDX41-212ENST00000511040 SLC13A2Q13183 592 aa13.12□□□□□ -0.31
DDX41-212ENST00000511040 RASA2Q15283 850 aa13.12□□□□□ -0.31
DDX41-212ENST00000511040 ZNF678Q5SXM1 525 aa13.12□□□□□ -0.31
DDX41-212ENST00000511040 B3GNTL1Q67FW5 361 aaPredicted RBP13.12□□□□□ -0.31
DDX41-212ENST00000511040 SLC6A19Q695T7 634 aa13.12□□□□□ -0.31
DDX41-212ENST00000511040 FCRLBQ6BAA4 426 aa13.12□□□□□ -0.31
DDX41-212ENST00000511040 JMJD6Q6NYC1 403 aaPredicted RBP13.12□□□□□ -0.31
DDX41-212ENST00000511040 QSOX2Q6ZRP7 698 aa13.12□□□□□ -0.31
DDX41-212ENST00000511040 SRFBP1Q8NEF9 429 aaKnown RBP13.12□□□□□ -0.31
DDX41-212ENST00000511040 WDR20Q8TBZ3 569 aa13.12□□□□□ -0.31
DDX41-212ENST00000511040 PSMF1Q92530 271 aa13.12□□□□□ -0.31
DDX41-212ENST00000511040 RGMAQ96B86 450 aa13.12□□□□□ -0.31
DDX41-212ENST00000511040 NTMT1Q9BV86 223 aa13.12□□□□□ -0.31
DDX41-212ENST00000511040 C1QTNF3Q9BXJ4 246 aa13.12□□□□□ -0.31
DDX41-212ENST00000511040 PRTFDC1Q9NRG1 225 aa13.12□□□□□ -0.31
DDX41-212ENST00000511040 FARSBQ9NSD9 589 aaKnown RBP13.12□□□□□ -0.31
DDX41-212ENST00000511040 KCMF1Q9P0J7 381 aa13.12□□□□□ -0.31
DDX41-212ENST00000511040 FBXW2Q9UKT8 454 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms