RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 HNRNPH1P31943 449 aaKnown RBP14.37□□□□□ -0.11
TPM3-219ENST00000509409 TRHRP34981 398 aaPredicted RBP14.37□□□□□ -0.11
TPM3-219ENST00000509409 HSPA7P48741 367 aa14.37□□□□□ -0.11
TPM3-219ENST00000509409 RAB38P57729 211 aa14.37□□□□□ -0.11
TPM3-219ENST00000509409 ADORA2A-AS1P86434 159 aa14.37□□□□□ -0.11
TPM3-219ENST00000509409 HSF1Q00613 529 aa14.37□□□□□ -0.11
TPM3-219ENST00000509409 HIST2H2ACQ16777 129 aaPredicted RBP14.37□□□□□ -0.11
TPM3-219ENST00000509409 XKR6Q5GH73 641 aa14.37□□□□□ -0.11
TPM3-219ENST00000509409 HIST2H2AA3Q6FI13 130 aa14.37□□□□□ -0.11
TPM3-219ENST00000509409 SULT1C3Q6IMI6 304 aa14.37□□□□□ -0.11
TPM3-219ENST00000509409 TRIM40Q6P9F5 258 aa14.37□□□□□ -0.11
TPM3-219ENST00000509409 Q6ZPB1 254 aaPredicted RBP14.37□□□□□ -0.11
TPM3-219ENST00000509409 SIAH3Q8IW03 269 aa14.37□□□□□ -0.11
TPM3-219ENST00000509409 FAM47BQ8NA70 645 aa14.37□□□□□ -0.11
TPM3-219ENST00000509409 ESAMQ96AP7 390 aa14.37□□□□□ -0.11
TPM3-219ENST00000509409 NT5DC2Q9H857 520 aa14.37□□□□□ -0.11
TPM3-219ENST00000509409 COPS7BQ9H9Q2 264 aaPredicted RBP14.37□□□□□ -0.11
TPM3-219ENST00000509409 KLF13Q9Y2Y9 288 aaPredicted RBP14.37□□□□□ -0.11
TPM3-219ENST00000509409 MEMO1Q9Y316 297 aa14.37□□□□□ -0.11
TPM3-219ENST00000509409 CXorf49A8MYA2 514 aaPredicted RBP14.36□□□□□ -0.11
TPM3-219ENST00000509409 PRRG2O14669 202 aa14.36□□□□□ -0.11
TPM3-219ENST00000509409 TFECO14948 347 aaPredicted RBP14.36□□□□□ -0.11
TPM3-219ENST00000509409 TAPBPO15533 448 aa14.36□□□□□ -0.11
TPM3-219ENST00000509409 PHGDHO43175 533 aaKnown RBP14.36□□□□□ -0.11
TPM3-219ENST00000509409 PEX1O43933 1283 aa14.36□□□□□ -0.11
TPM3-219ENST00000509409 CLEC3AO75596 197 aa14.36□□□□□ -0.11
TPM3-219ENST00000509409 ZFAND5O76080 213 aa14.36□□□□□ -0.11
TPM3-219ENST00000509409 S100BP04271 92 aaPredicted RBP14.36□□□□□ -0.11
TPM3-219ENST00000509409 STMN1P16949 149 aa14.36□□□□□ -0.11
TPM3-219ENST00000509409 GSTM2P28161 218 aa14.36□□□□□ -0.11
TPM3-219ENST00000509409 MEOX1P50221 254 aa14.36□□□□□ -0.11
TPM3-219ENST00000509409 HSD17B7P56937 341 aa14.36□□□□□ -0.11
TPM3-219ENST00000509409 ATP6V0D1P61421 351 aa14.36□□□□□ -0.11
TPM3-219ENST00000509409 TGM3Q08188 693 aa14.36□□□□□ -0.11
TPM3-219ENST00000509409 BMPR2Q13873 1038 aa14.36□□□□□ -0.11
TPM3-219ENST00000509409 RCN2Q14257 317 aa14.36□□□□□ -0.11
TPM3-219ENST00000509409 RNFT1Q5M7Z0 435 aa14.36□□□□□ -0.11
TPM3-219ENST00000509409 C3orf62Q6ZUJ4 267 aa14.36□□□□□ -0.11
TPM3-219ENST00000509409 MAATS1Q7Z4T9 603 aa14.36□□□□□ -0.11
TPM3-219ENST00000509409 CLNKQ7Z7G1 428 aa14.36□□□□□ -0.11
TPM3-219ENST00000509409 SULF2Q8IWU5 870 aa14.36□□□□□ -0.11
TPM3-219ENST00000509409 ZNF595Q8IYB9 648 aa14.36□□□□□ -0.11
TPM3-219ENST00000509409 CYP4Z2PQ8N1L4 340 aa14.36□□□□□ -0.11
TPM3-219ENST00000509409 POGLUT1Q8NBL1 392 aa14.36□□□□□ -0.11
TPM3-219ENST00000509409 APCDD1LQ8NCL9 501 aa14.36□□□□□ -0.11
TPM3-219ENST00000509409 AGAP11Q8TF27 550 aa14.36□□□□□ -0.11
TPM3-219ENST00000509409 NCLNQ969V3 563 aa14.36□□□□□ -0.11
TPM3-219ENST00000509409 VMP1Q96GC9 406 aa14.36□□□□□ -0.11
TPM3-219ENST00000509409 SEC16BQ96JE7 1060 aa14.36□□□□□ -0.11
TPM3-219ENST00000509409 CPNE1Q99829 537 aa14.36□□□□□ -0.11
TPM3-219ENST00000509409 ERP44Q9BS26 406 aa14.36□□□□□ -0.11
TPM3-219ENST00000509409 PITHD1Q9GZP4 211 aaPredicted RBP14.36□□□□□ -0.11
TPM3-219ENST00000509409 TRIM45Q9H8W5 580 aaPredicted RBP14.36□□□□□ -0.11
TPM3-219ENST00000509409 RNF112Q9ULX5 631 aa14.36□□□□□ -0.11
TPM3-219ENST00000509409 ERVK-11Q9UQG0 969 aa14.36□□□□□ -0.11
TPM3-219ENST00000509409 MYOCOSA0A1B0GUC4 107 aa14.35□□□□□ -0.11
TPM3-219ENST00000509409 FAM187AA6NFU0 413 aa14.35□□□□□ -0.11
TPM3-219ENST00000509409 CDC40O60508 579 aaKnown RBP eCLIP14.35□□□□□ -0.11
TPM3-219ENST00000509409 CCNT2O60583 730 aaKnown RBP14.35□□□□□ -0.11
TPM3-219ENST00000509409 ITGA10O75578 1167 aa14.35□□□□□ -0.11
TPM3-219ENST00000509409 CD1DP15813 335 aa14.35□□□□□ -0.11
TPM3-219ENST00000509409 TNNI3P19429 210 aa14.35□□□□□ -0.11
TPM3-219ENST00000509409 AGAP20933 346 aa14.35□□□□□ -0.11
TPM3-219ENST00000509409 PPP2R1BP30154 601 aa14.35□□□□□ -0.11
TPM3-219ENST00000509409 GGT5P36269 586 aa14.35□□□□□ -0.11
TPM3-219ENST00000509409 RFC3P40938 356 aa14.35□□□□□ -0.11
TPM3-219ENST00000509409 SSR4P51571 173 aa14.35□□□□□ -0.11
TPM3-219ENST00000509409 MTTPP55157 894 aa14.35□□□□□ -0.11
TPM3-219ENST00000509409 LAPTM5Q13571 262 aa14.35□□□□□ -0.11
TPM3-219ENST00000509409 DOC2AQ14183 400 aa14.35□□□□□ -0.11
TPM3-219ENST00000509409 TERF2Q15554 542 aa14.35□□□□□ -0.11
TPM3-219ENST00000509409 OR4D1Q15615 310 aa14.35□□□□□ -0.11
TPM3-219ENST00000509409 C3P1Q6ZMU1 363 aa14.35□□□□□ -0.11
TPM3-219ENST00000509409 ZNF227Q86WZ6 799 aa14.35□□□□□ -0.11
TPM3-219ENST00000509409 DOLPP1Q86YN1 238 aa14.35□□□□□ -0.11
TPM3-219ENST00000509409 SCUBE1Q8IWY4 988 aa14.35□□□□□ -0.11
TPM3-219ENST00000509409 CTAGE3PQ8IX95 158 aa14.35□□□□□ -0.11
TPM3-219ENST00000509409 EID3Q8N140 333 aa14.35□□□□□ -0.11
TPM3-219ENST00000509409 TMEM132CQ8N3T6 1108 aa14.35□□□□□ -0.11
TPM3-219ENST00000509409 TMEM52Q8NDY8 209 aa14.35□□□□□ -0.11
TPM3-219ENST00000509409 OR2L5Q8NG80 312 aa14.35□□□□□ -0.11
TPM3-219ENST00000509409 EXT2Q93063 718 aa14.35□□□□□ -0.11
TPM3-219ENST00000509409 MTFMTQ96DP5 389 aaKnown RBP14.35□□□□□ -0.11
TPM3-219ENST00000509409 PTCD3Q96EY7 689 aaKnown RBP14.35□□□□□ -0.11
TPM3-219ENST00000509409 QRFPRQ96P65 431 aa14.35□□□□□ -0.11
TPM3-219ENST00000509409 PHF12Q96QT6 1004 aa14.35□□□□□ -0.11
TPM3-219ENST00000509409 F2RL3Q96RI0 385 aa14.35□□□□□ -0.11
TPM3-219ENST00000509409 SERINC2Q96SA4 455 aa14.35□□□□□ -0.11
TPM3-219ENST00000509409 TMEM79Q9BSE2 394 aa14.35□□□□□ -0.11
TPM3-219ENST00000509409 MCMBPQ9BTE3 642 aa14.35□□□□□ -0.11
TPM3-219ENST00000509409 LIN28AQ9H9Z2 209 aaKnown RBP14.35□□□□□ -0.11
TPM3-219ENST00000509409 TIMMDC1Q9NPL8 285 aa14.35□□□□□ -0.11
TPM3-219ENST00000509409 WHRNQ9P202 907 aa14.35□□□□□ -0.11
TPM3-219ENST00000509409 ZNF490Q9ULM2 529 aaPredicted RBP14.35□□□□□ -0.11
TPM3-219ENST00000509409 CLCA3PQ9Y6N3 262 aa14.35□□□□□ -0.11
TPM3-219ENST00000509409 EIF3HO15372 352 aaKnown RBP eCLIP14.34□□□□□ -0.11
TPM3-219ENST00000509409 CLDN14O95500 239 aa14.34□□□□□ -0.11
TPM3-219ENST00000509409 CERS1P27544 350 aa14.34□□□□□ -0.11
TPM3-219ENST00000509409 PTGER1P34995 402 aa14.34□□□□□ -0.11
TPM3-219ENST00000509409 SPRP35270 261 aaPredicted RBP14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms