RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 S100GP29377 79 aa3.76□□□□□ -1.81
NEDD4-209ENST00000508871 GPR15P49685 360 aa3.76□□□□□ -1.81
NEDD4-209ENST00000508871 TARDBPQ13148 414 aaKnown RBP eCLIP3.76□□□□□ -1.81
NEDD4-209ENST00000508871 MAD2L1Q13257 205 aaPredicted RBP3.76□□□□□ -1.81
NEDD4-209ENST00000508871 XRCC4Q13426 336 aa3.76□□□□□ -1.81
NEDD4-209ENST00000508871 MAD2L1BPQ15013 274 aaPredicted RBP3.76□□□□□ -1.81
NEDD4-209ENST00000508871 BCL7AQ4VC05 210 aa3.76□□□□□ -1.81
NEDD4-209ENST00000508871 FBLN7Q53RD9 439 aa3.76□□□□□ -1.81
NEDD4-209ENST00000508871 PDZD11Q5EBL8 140 aa3.76□□□□□ -1.81
NEDD4-209ENST00000508871 AARS2Q5JTZ9 985 aaKnown RBP3.76□□□□□ -1.81
NEDD4-209ENST00000508871 AGAP7PQ5VUJ5 663 aa3.76□□□□□ -1.81
NEDD4-209ENST00000508871 C17orf99Q6UX52 265 aa3.76□□□□□ -1.81
NEDD4-209ENST00000508871 HSDL2Q6YN16 418 aa3.76□□□□□ -1.81
NEDD4-209ENST00000508871 NRARPQ7Z6K4 114 aa3.76□□□□□ -1.81
NEDD4-209ENST00000508871 MMAAQ8IVH4 418 aaKnown RBP3.76□□□□□ -1.81
NEDD4-209ENST00000508871 TMEM123Q8N131 208 aa3.76□□□□□ -1.81
NEDD4-209ENST00000508871 SLC25A41Q8N5S1 370 aa3.76□□□□□ -1.81
NEDD4-209ENST00000508871 PSD4Q8NDX1 1056 aa3.76□□□□□ -1.81
NEDD4-209ENST00000508871 RHEBL1Q8TAI7 183 aa3.76□□□□□ -1.81
NEDD4-209ENST00000508871 DQX1Q8TE96 717 aaKnown RBP3.76□□□□□ -1.81
NEDD4-209ENST00000508871 FAM84AQ96KN4 292 aa3.76□□□□□ -1.81
NEDD4-209ENST00000508871 ZNF597Q96LX8 424 aa3.76□□□□□ -1.81
NEDD4-209ENST00000508871 SPATA33Q96N06 139 aa3.76□□□□□ -1.81
NEDD4-209ENST00000508871 AGAP4Q96P64 663 aa3.76□□□□□ -1.81
NEDD4-209ENST00000508871 MICU1Q9BPX6 476 aa3.76□□□□□ -1.81
NEDD4-209ENST00000508871 ZNF552Q9H707 407 aaPredicted RBP3.76□□□□□ -1.81
NEDD4-209ENST00000508871 ABCG2Q9UNQ0 655 aa3.76□□□□□ -1.81
NEDD4-209ENST00000508871 LIPGQ9Y5X9 500 aa3.76□□□□□ -1.81
NEDD4-209ENST00000508871 NPTNQ9Y639 398 aa3.76□□□□□ -1.81
NEDD4-209ENST00000508871 LOC100289279A0A1B0GTE1 492 aa3.76□□□□□ -1.81
NEDD4-209ENST00000508871 C2orf78A6NCI8 922 aa3.76□□□□□ -1.81
NEDD4-209ENST00000508871 TMEM210A6NLX4 147 aa3.76□□□□□ -1.81
NEDD4-209ENST00000508871 CLCA1A8K7I4 914 aa3.76□□□□□ -1.81
NEDD4-209ENST00000508871 PFDN6O15212 129 aa3.76□□□□□ -1.81
NEDD4-209ENST00000508871 OTCP00480 354 aa3.76□□□□□ -1.81
NEDD4-209ENST00000508871 ALDOCP09972 364 aaKnown RBP3.76□□□□□ -1.81
NEDD4-209ENST00000508871 FAM87AP0C7U9 286 aa3.76□□□□□ -1.81
NEDD4-209ENST00000508871 MMP8P22894 467 aa3.76□□□□□ -1.81
NEDD4-209ENST00000508871 EDNRBP24530 442 aa3.76□□□□□ -1.81
NEDD4-209ENST00000508871 ADORA2AP29274 412 aa3.76□□□□□ -1.81
NEDD4-209ENST00000508871 BIDP55957 195 aa3.76□□□□□ -1.81
NEDD4-209ENST00000508871 TPTEP56180 551 aa3.76□□□□□ -1.81
NEDD4-209ENST00000508871 CDR2Q01850 454 aa3.76□□□□□ -1.81
NEDD4-209ENST00000508871 HHEXQ03014 270 aa3.76□□□□□ -1.81
NEDD4-209ENST00000508871 CRHR2Q13324 411 aa3.76□□□□□ -1.81
NEDD4-209ENST00000508871 MTM1Q13496 603 aa3.76□□□□□ -1.81
NEDD4-209ENST00000508871 KRR1Q13601 381 aaKnown RBP3.76□□□□□ -1.81
NEDD4-209ENST00000508871 HYAL4Q2M3T9 481 aa3.76□□□□□ -1.81
NEDD4-209ENST00000508871 PARP6Q2NL67 630 aa3.76□□□□□ -1.81
NEDD4-209ENST00000508871 ZNF362Q5T0B9 420 aaPredicted RBP3.76□□□□□ -1.81
NEDD4-209ENST00000508871 SLC22A10Q63ZE4 541 aa3.76□□□□□ -1.81
NEDD4-209ENST00000508871 CCDC144NLQ6NUI1 221 aa3.76□□□□□ -1.81
NEDD4-209ENST00000508871 TAPT1Q6NXT6 567 aa3.76□□□□□ -1.81
NEDD4-209ENST00000508871 PROSER1Q86XN7 944 aa3.76□□□□□ -1.81
NEDD4-209ENST00000508871 MRPL43Q8N983 215 aaKnown RBP3.76□□□□□ -1.81
NEDD4-209ENST00000508871 R3HDM4Q96D70 268 aa3.76□□□□□ -1.81
NEDD4-209ENST00000508871 DNAJC19Q96DA6 116 aa3.76□□□□□ -1.81
NEDD4-209ENST00000508871 RSPRY1Q96DX4 576 aa3.76□□□□□ -1.81
NEDD4-209ENST00000508871 NEIL1Q96FI4 390 aaPredicted RBP3.76□□□□□ -1.81
NEDD4-209ENST00000508871 C12orf66Q96MD2 445 aa3.76□□□□□ -1.81
NEDD4-209ENST00000508871 CPPED1Q9BRF8 314 aaPredicted RBP3.76□□□□□ -1.81
NEDD4-209ENST00000508871 CEP41Q9BYV8 373 aa3.76□□□□□ -1.81
NEDD4-209ENST00000508871 ASB1Q9Y576 335 aa3.76□□□□□ -1.81
NEDD4-209ENST00000508871 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP3.76□□□□□ -1.81
NEDD4-209ENST00000508871 TRAFD1O14545 582 aaPredicted RBP3.76□□□□□ -1.81
NEDD4-209ENST00000508871 FOXN1O15353 648 aa3.76□□□□□ -1.81
NEDD4-209ENST00000508871 LIASO43766 372 aa3.76□□□□□ -1.81
NEDD4-209ENST00000508871 UGDHO60701 494 aa3.76□□□□□ -1.81
NEDD4-209ENST00000508871 ATG13O75143 517 aa3.76□□□□□ -1.81
NEDD4-209ENST00000508871 TMEM63AO94886 807 aa3.76□□□□□ -1.81
NEDD4-209ENST00000508871 SLITRK3O94933 977 aa3.76□□□□□ -1.81
NEDD4-209ENST00000508871 TXNDC12O95881 172 aa3.76□□□□□ -1.81
NEDD4-209ENST00000508871 MYL2P10916 166 aa3.76□□□□□ -1.81
NEDD4-209ENST00000508871 ABOP16442 354 aa3.76□□□□□ -1.81
NEDD4-209ENST00000508871 IL11P20809 199 aa3.76□□□□□ -1.81
NEDD4-209ENST00000508871 MST1P26927 711 aa3.76□□□□□ -1.81
NEDD4-209ENST00000508871 CD1CP29017 333 aa3.76□□□□□ -1.81
NEDD4-209ENST00000508871 HNRNPH3P31942 346 aaKnown RBP3.76□□□□□ -1.81
NEDD4-209ENST00000508871 PEX3P56589 373 aa3.76□□□□□ -1.81
NEDD4-209ENST00000508871 NFATC2Q13469 925 aa3.76□□□□□ -1.81
NEDD4-209ENST00000508871 KLHL38Q2WGJ6 581 aa3.76□□□□□ -1.81
NEDD4-209ENST00000508871 CBWD6Q4V339 395 aa3.76□□□□□ -1.81
NEDD4-209ENST00000508871 ZCWPW2Q504Y3 356 aa3.76□□□□□ -1.81
NEDD4-209ENST00000508871 CBWD3Q5JTY5 395 aa3.76□□□□□ -1.81
NEDD4-209ENST00000508871 CCNYL2Q5T2Q4 361 aa3.76□□□□□ -1.81
NEDD4-209ENST00000508871 JADE1Q6IE81 842 aa3.76□□□□□ -1.81
NEDD4-209ENST00000508871 DPY19L3Q6ZPD9 716 aa3.76□□□□□ -1.81
NEDD4-209ENST00000508871 ZNF367Q7RTV3 350 aa3.76□□□□□ -1.81
NEDD4-209ENST00000508871 VN1R5Q7Z5H4 357 aa3.76□□□□□ -1.81
NEDD4-209ENST00000508871 ANKRD46Q86W74 232 aa3.76□□□□□ -1.81
NEDD4-209ENST00000508871 KLBQ86Z14 1044 aa3.76□□□□□ -1.81
NEDD4-209ENST00000508871 ARHGEF19Q8IW93 802 aa3.76□□□□□ -1.81
NEDD4-209ENST00000508871 DNAJC22Q8N4W6 341 aa3.76□□□□□ -1.81
NEDD4-209ENST00000508871 C19orf18Q8NEA5 215 aa3.76□□□□□ -1.81
NEDD4-209ENST00000508871 GJC3Q8NFK1 279 aa3.76□□□□□ -1.81
NEDD4-209ENST00000508871 IRGQQ8WZA9 623 aa3.76□□□□□ -1.81
NEDD4-209ENST00000508871 IL22RA2Q969J5 263 aa3.76□□□□□ -1.81
NEDD4-209ENST00000508871 MOB3AQ96BX8 217 aa3.76□□□□□ -1.81
NEDD4-209ENST00000508871 ZNF668Q96K58 619 aaPredicted RBP3.76□□□□□ -1.81
NEDD4-209ENST00000508871 SERPINB12Q96P63 405 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms