RNA–Protein interactions for RNA: ENST00000508852.5

CCHCR1-227, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 589 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-227ENST00000508852 ADAP2Q9NPF8 381 aa12.72□□□□□ -0.37
CCHCR1-227ENST00000508852 PRTFDC1Q9NRG1 225 aa12.72□□□□□ -0.37
CCHCR1-227ENST00000508852 ANKRD10Q9NXR5 420 aa12.72□□□□□ -0.37
CCHCR1-227ENST00000508852 ADGRE2Q9UHX3 823 aa12.72□□□□□ -0.37
CCHCR1-227ENST00000508852 IKZF3Q9UKT9 509 aa12.72□□□□□ -0.37
CCHCR1-227ENST00000508852 YARS2Q9Y2Z4 477 aaKnown RBP12.72□□□□□ -0.37
CCHCR1-227ENST00000508852 UTP11Q9Y3A2 253 aaKnown RBP12.72□□□□□ -0.37
CCHCR1-227ENST00000508852 ARHGAP10A1A4S6 786 aa12.71□□□□□ -0.37
CCHCR1-227ENST00000508852 NPIPA5E9PKD4 350 aa12.71□□□□□ -0.37
CCHCR1-227ENST00000508852 TP73O15350 636 aa12.71□□□□□ -0.37
CCHCR1-227ENST00000508852 ZFAND5O76080 213 aa12.71□□□□□ -0.37
CCHCR1-227ENST00000508852 ABOP16442 354 aa12.71□□□□□ -0.37
CCHCR1-227ENST00000508852 MAOAP21397 527 aa12.71□□□□□ -0.37
CCHCR1-227ENST00000508852 CRABP2P29373 138 aa12.71□□□□□ -0.37
CCHCR1-227ENST00000508852 KCNC1P48547 511 aa12.71□□□□□ -0.37
CCHCR1-227ENST00000508852 RAB10P61026 200 aa12.71□□□□□ -0.37
CCHCR1-227ENST00000508852 PMP22Q01453 160 aa12.71□□□□□ -0.37
CCHCR1-227ENST00000508852 SLC13A2Q13183 592 aa12.71□□□□□ -0.37
CCHCR1-227ENST00000508852 ZNF460Q14592 562 aa12.71□□□□□ -0.37
CCHCR1-227ENST00000508852 FASTKD3Q14CZ7 662 aaKnown RBP12.71□□□□□ -0.37
CCHCR1-227ENST00000508852 PDK4Q16654 411 aa12.71□□□□□ -0.37
CCHCR1-227ENST00000508852 XKR6Q5GH73 641 aa12.71□□□□□ -0.37
CCHCR1-227ENST00000508852 PAOXQ6QHF9 649 aa12.71□□□□□ -0.37
CCHCR1-227ENST00000508852 C3orf62Q6ZUJ4 267 aa12.71□□□□□ -0.37
CCHCR1-227ENST00000508852 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.71□□□□□ -0.37
CCHCR1-227ENST00000508852 SCUBE1Q8IWY4 988 aa12.71□□□□□ -0.37
CCHCR1-227ENST00000508852 SNX31Q8N9S9 440 aa12.71□□□□□ -0.37
CCHCR1-227ENST00000508852 PDPRQ8NCN5 879 aa12.71□□□□□ -0.37
CCHCR1-227ENST00000508852 STAG3L4Q8TBR4 150 aa12.71□□□□□ -0.37
CCHCR1-227ENST00000508852 PHF10Q8WUB8 498 aaKnown RBP12.71□□□□□ -0.37
CCHCR1-227ENST00000508852 ANKRD49Q8WVL7 239 aa12.71□□□□□ -0.37
CCHCR1-227ENST00000508852 KCNC2Q96PR1 638 aa12.71□□□□□ -0.37
CCHCR1-227ENST00000508852 LYRM4Q9HD34 91 aa12.71□□□□□ -0.37
CCHCR1-227ENST00000508852 SAYSD1Q9NPB0 183 aa12.71□□□□□ -0.37
CCHCR1-227ENST00000508852 TIMMDC1Q9NPL8 285 aa12.71□□□□□ -0.37
CCHCR1-227ENST00000508852 NECTIN3Q9NQS3 549 aa12.71□□□□□ -0.37
CCHCR1-227ENST00000508852 CD274Q9NZQ7 290 aa12.71□□□□□ -0.37
CCHCR1-227ENST00000508852 RNF112Q9ULX5 631 aa12.71□□□□□ -0.37
CCHCR1-227ENST00000508852 NPIPA1Q9UND3 350 aa12.71□□□□□ -0.37
CCHCR1-227ENST00000508852 GTF3C1Q12789 2109 aa12.71□□□□□ -0.38
CCHCR1-227ENST00000508852 TRBV11-1A0A0K0K1C0 115 aa12.7□□□□□ -0.38
CCHCR1-227ENST00000508852 NCF1BA6NI72 391 aaPredicted RBP12.7□□□□□ -0.38
CCHCR1-227ENST00000508852 FAM159BA6NKW6 160 aa12.7□□□□□ -0.38
CCHCR1-227ENST00000508852 USP27XA6NNY8 438 aa12.7□□□□□ -0.38
CCHCR1-227ENST00000508852 NCF1CA8MVU1 366 aaPredicted RBP12.7□□□□□ -0.38
CCHCR1-227ENST00000508852 CTNSO60931 367 aa12.7□□□□□ -0.38
CCHCR1-227ENST00000508852 MYO1DO94832 1006 aa12.7□□□□□ -0.38
CCHCR1-227ENST00000508852 WISP3O95389 354 aaPredicted RBP12.7□□□□□ -0.38
CCHCR1-227ENST00000508852 NCF1P14598 390 aaPredicted RBP12.7□□□□□ -0.38
CCHCR1-227ENST00000508852 COX6B1P14854 86 aa12.7□□□□□ -0.38
CCHCR1-227ENST00000508852 HTR1EP28566 365 aa12.7□□□□□ -0.38
CCHCR1-227ENST00000508852 STX2P32856 288 aa12.7□□□□□ -0.38
CCHCR1-227ENST00000508852 CASP2P42575 452 aa12.7□□□□□ -0.38
CCHCR1-227ENST00000508852 GDF5P43026 501 aa12.7□□□□□ -0.38
CCHCR1-227ENST00000508852 PGGT1BP53609 377 aa12.7□□□□□ -0.38
CCHCR1-227ENST00000508852 SERTAD2Q14140 314 aa12.7□□□□□ -0.38
CCHCR1-227ENST00000508852 ELAVL1Q15717 326 aaKnown RBP12.7□□□□□ -0.38
CCHCR1-227ENST00000508852 TMEM35AQ53FP2 167 aa12.7□□□□□ -0.38
CCHCR1-227ENST00000508852 RGS9BPQ6ZS82 235 aa12.7□□□□□ -0.38
CCHCR1-227ENST00000508852 CHSY3Q70JA7 882 aa12.7□□□□□ -0.38
CCHCR1-227ENST00000508852 LRRC70Q7Z2Q7 622 aa12.7□□□□□ -0.38
CCHCR1-227ENST00000508852 SIAH3Q8IW03 269 aa12.7□□□□□ -0.38
CCHCR1-227ENST00000508852 CYP4Z2PQ8N1L4 340 aa12.7□□□□□ -0.38
CCHCR1-227ENST00000508852 KIF2BQ8N4N8 673 aa12.7□□□□□ -0.38
CCHCR1-227ENST00000508852 APCDD1LQ8NCL9 501 aa12.7□□□□□ -0.38
CCHCR1-227ENST00000508852 MORN4Q8NDC4 146 aa12.7□□□□□ -0.38
CCHCR1-227ENST00000508852 SPATA4Q8NEY3 305 aa12.7□□□□□ -0.38
CCHCR1-227ENST00000508852 PDLIM2Q96JY6 352 aa12.7□□□□□ -0.38
CCHCR1-227ENST00000508852 UBXN10Q96LJ8 280 aa12.7□□□□□ -0.38
CCHCR1-227ENST00000508852 CENPKQ9BS16 269 aa12.7□□□□□ -0.38
CCHCR1-227ENST00000508852 TBCDQ9BTW9 1192 aa12.7□□□□□ -0.38
CCHCR1-227ENST00000508852 NMRAL1Q9HBL8 299 aa12.7□□□□□ -0.38
CCHCR1-227ENST00000508852 PNO1Q9NRX1 252 aaKnown RBP12.7□□□□□ -0.38
CCHCR1-227ENST00000508852 PTBP2Q9UKA9 531 aaKnown RBP12.7□□□□□ -0.38
CCHCR1-227ENST00000508852 FBXW2Q9UKT8 454 aa12.7□□□□□ -0.38
CCHCR1-227ENST00000508852 MTO1Q9Y2Z2 717 aaKnown RBP12.7□□□□□ -0.38
CCHCR1-227ENST00000508852 MEMO1Q9Y316 297 aa12.7□□□□□ -0.38
CCHCR1-227ENST00000508852 CLCA3PQ9Y6N3 262 aa12.7□□□□□ -0.38
CCHCR1-227ENST00000508852 TCRBV9S1A1TA0A576 114 aa12.69□□□□□ -0.38
CCHCR1-227ENST00000508852 SYCE1LA8MT33 242 aa12.69□□□□□ -0.38
CCHCR1-227ENST00000508852 E9PLN8 166 aa12.69□□□□□ -0.38
CCHCR1-227ENST00000508852 TFECO14948 347 aaPredicted RBP12.69□□□□□ -0.38
CCHCR1-227ENST00000508852 DYRK3O43781 588 aa12.69□□□□□ -0.38
CCHCR1-227ENST00000508852 MAN1A2O60476 641 aa12.69□□□□□ -0.38
CCHCR1-227ENST00000508852 DNAJB6O75190 326 aa12.69□□□□□ -0.38
CCHCR1-227ENST00000508852 CLDN14O95500 239 aa12.69□□□□□ -0.38
CCHCR1-227ENST00000508852 B3GALT4O96024 378 aa12.69□□□□□ -0.38
CCHCR1-227ENST00000508852 CD1DP15813 335 aa12.69□□□□□ -0.38
CCHCR1-227ENST00000508852 TNFRSF8P28908 595 aa12.69□□□□□ -0.38
CCHCR1-227ENST00000508852 SSTR1P30872 391 aa12.69□□□□□ -0.38
CCHCR1-227ENST00000508852 HNRNPH1P31943 449 aaKnown RBP12.69□□□□□ -0.38
CCHCR1-227ENST00000508852 SSR4P51571 173 aa12.69□□□□□ -0.38
CCHCR1-227ENST00000508852 ARFIP1P53367 373 aa12.69□□□□□ -0.38
CCHCR1-227ENST00000508852 IRF8Q02556 426 aa12.69□□□□□ -0.38
CCHCR1-227ENST00000508852 STX4Q12846 297 aa12.69□□□□□ -0.38
CCHCR1-227ENST00000508852 RUNX2Q13950 521 aa12.69□□□□□ -0.38
CCHCR1-227ENST00000508852 ZKSCAN8Q15776 578 aaPredicted RBP12.69□□□□□ -0.38
CCHCR1-227ENST00000508852 C3AR1Q16581 482 aa12.69□□□□□ -0.38
CCHCR1-227ENST00000508852 TMEM211Q6ICI0 200 aa12.69□□□□□ -0.38
CCHCR1-227ENST00000508852 ABHD17CQ6PCB6 329 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms