RNA–Protein interactions for RNA: ENST00000508337.1

GYPA-205, Transcript of glycophorin A (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPA, Length 622 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-205ENST00000508337 MTIF3Q9H2K0 278 aaKnown RBP4.24□□□□□ -1.73
GYPA-205ENST00000508337 UBQLN3Q9H347 655 aa4.24□□□□□ -1.73
GYPA-205ENST00000508337 NOCTQ9UK39 431 aaKnown RBP4.24□□□□□ -1.73
GYPA-205ENST00000508337 DUSP12Q9UNI6 340 aa4.24□□□□□ -1.73
GYPA-205ENST00000508337 ZNF510Q9Y2H8 683 aa4.24□□□□□ -1.73
GYPA-205ENST00000508337 ATP6V0A2Q9Y487 856 aa4.24□□□□□ -1.73
GYPA-205ENST00000508337 KRT87PA6NCN2 255 aa4.23□□□□□ -1.73
GYPA-205ENST00000508337 YDJCA8MPS7 323 aa4.23□□□□□ -1.73
GYPA-205ENST00000508337 KBTBD13C9JR72 458 aa4.23□□□□□ -1.73
GYPA-205ENST00000508337 NPIPB9F8W1W9 429 aa4.23□□□□□ -1.73
GYPA-205ENST00000508337 OGTO15294 1046 aa4.23□□□□□ -1.73
GYPA-205ENST00000508337 INPP4BO15327 924 aa4.23□□□□□ -1.73
GYPA-205ENST00000508337 GRAP2O75791 330 aa4.23□□□□□ -1.73
GYPA-205ENST00000508337 MT-ND2P03891 347 aa4.23□□□□□ -1.73
GYPA-205ENST00000508337 SCG2P13521 617 aa4.23□□□□□ -1.73
GYPA-205ENST00000508337 PSMB4P28070 264 aa4.23□□□□□ -1.73
GYPA-205ENST00000508337 LMO4P61968 165 aa4.23□□□□□ -1.73
GYPA-205ENST00000508337 FOLH1Q04609 750 aa4.23□□□□□ -1.73
GYPA-205ENST00000508337 TAF7Q15545 349 aaPredicted RBP4.23□□□□□ -1.73
GYPA-205ENST00000508337 ZKSCAN8Q15776 578 aaPredicted RBP4.23□□□□□ -1.73
GYPA-205ENST00000508337 TCEAL6Q6IPX3 200 aa4.23□□□□□ -1.73
GYPA-205ENST00000508337 CCBE1Q6UXH8 406 aaPredicted RBP4.23□□□□□ -1.73
GYPA-205ENST00000508337 C3P1Q6ZMU1 363 aa4.23□□□□□ -1.73
GYPA-205ENST00000508337 ZNF841Q6ZN19 808 aa4.23□□□□□ -1.73
GYPA-205ENST00000508337 COX8CQ7Z4L0 72 aa4.23□□□□□ -1.73
GYPA-205ENST00000508337 SLC25A42Q86VD7 318 aa4.23□□□□□ -1.73
GYPA-205ENST00000508337 MEX3DQ86XN8 651 aaKnown RBP4.23□□□□□ -1.73
GYPA-205ENST00000508337 ELMOD1Q8N336 334 aa4.23□□□□□ -1.73
GYPA-205ENST00000508337 Q8N377 158 aa4.23□□□□□ -1.73
GYPA-205ENST00000508337 TEX26Q8N6G2 289 aa4.23□□□□□ -1.73
GYPA-205ENST00000508337 SMYD1Q8NB12 490 aa4.23□□□□□ -1.73
GYPA-205ENST00000508337 OR5M9Q8NGP3 310 aa4.23□□□□□ -1.73
GYPA-205ENST00000508337 GDAP1Q8TB36 358 aa4.23□□□□□ -1.73
GYPA-205ENST00000508337 DEPDC1BQ8WUY9 529 aa4.23□□□□□ -1.73
GYPA-205ENST00000508337 KRT35Q92764 455 aa4.23□□□□□ -1.73
GYPA-205ENST00000508337 TOMM40LQ969M1 308 aa4.23□□□□□ -1.73
GYPA-205ENST00000508337 TMEM237Q96Q45 408 aa4.23□□□□□ -1.73
GYPA-205ENST00000508337 PUS3Q9BZE2 481 aaKnown RBP4.23□□□□□ -1.73
GYPA-205ENST00000508337 TRIM7Q9C029 511 aa4.23□□□□□ -1.73
GYPA-205ENST00000508337 HEXA-AS1Q9H8Q6 139 aa4.23□□□□□ -1.73
GYPA-205ENST00000508337 LMAN1LQ9HAT1 526 aa4.23□□□□□ -1.73
GYPA-205ENST00000508337 LAMP5Q9UJQ1 280 aa4.23□□□□□ -1.73
GYPA-205ENST00000508337 SYNJ2BP-COX16A0A087WUM0 186 aa4.22□□□□□ -1.73
GYPA-205ENST00000508337 TMCO5BA8MYB1 307 aa4.22□□□□□ -1.73
GYPA-205ENST00000508337 DDX39AO00148 427 aaKnown RBP4.22□□□□□ -1.73
GYPA-205ENST00000508337 SIGLEC5O15389 551 aa4.22□□□□□ -1.73
GYPA-205ENST00000508337 KLHL41O60662 606 aa4.22□□□□□ -1.73
GYPA-205ENST00000508337 CD59P13987 128 aa4.22□□□□□ -1.73
GYPA-205ENST00000508337 MYOGP15173 224 aa4.22□□□□□ -1.73
GYPA-205ENST00000508337 GAP43P17677 238 aa4.22□□□□□ -1.73
GYPA-205ENST00000508337 TLX1P31314 330 aaPredicted RBP4.22□□□□□ -1.73
GYPA-205ENST00000508337 DSCR10P59022 87 aa4.22□□□□□ -1.73
GYPA-205ENST00000508337 PTENP60484 403 aa4.22□□□□□ -1.73
GYPA-205ENST00000508337 ABCE1P61221 599 aaKnown RBP4.22□□□□□ -1.73
GYPA-205ENST00000508337 RBP5P82980 135 aa4.22□□□□□ -1.73
GYPA-205ENST00000508337 FKBP3Q00688 224 aaKnown RBP4.22□□□□□ -1.73
GYPA-205ENST00000508337 KLHL30Q0D2K2 578 aa4.22□□□□□ -1.73
GYPA-205ENST00000508337 LRRC74AQ0VAA2 488 aa4.22□□□□□ -1.73
GYPA-205ENST00000508337 BFSP1Q12934 665 aa4.22□□□□□ -1.73
GYPA-205ENST00000508337 UPP1Q16831 310 aa4.22□□□□□ -1.73
GYPA-205ENST00000508337 ANKDD1AQ495B1 522 aa4.22□□□□□ -1.73
GYPA-205ENST00000508337 LCE1FQ5T754 118 aa4.22□□□□□ -1.73
GYPA-205ENST00000508337 ZNF343Q6P1L6 599 aa4.22□□□□□ -1.73
GYPA-205ENST00000508337 DCLRE1AQ6PJP8 1040 aa4.22□□□□□ -1.73
GYPA-205ENST00000508337 KDELC1Q6UW63 502 aa4.22□□□□□ -1.73
GYPA-205ENST00000508337 ANKRD33Q7Z3H0 272 aa4.22□□□□□ -1.73
GYPA-205ENST00000508337 SIX6OS1Q8N1H7 587 aa4.22□□□□□ -1.73
GYPA-205ENST00000508337 POM121L12Q8N7R1 296 aa4.22□□□□□ -1.73
GYPA-205ENST00000508337 KIAA0895Q8NCT3 520 aa4.22□□□□□ -1.73
GYPA-205ENST00000508337 DNASE1L2Q92874 299 aa4.22□□□□□ -1.73
GYPA-205ENST00000508337 CCDC43Q96MW1 224 aaKnown RBP4.22□□□□□ -1.73
GYPA-205ENST00000508337 RPP25Q9BUL9 199 aaKnown RBP4.22□□□□□ -1.73
GYPA-205ENST00000508337 STRADBQ9C0K7 418 aa4.22□□□□□ -1.73
GYPA-205ENST00000508337 LSG1Q9H089 658 aaKnown RBP4.22□□□□□ -1.73
GYPA-205ENST00000508337 TUBB1Q9H4B7 451 aa4.22□□□□□ -1.73
GYPA-205ENST00000508337 AKAP7Q9P0M2 348 aaPredicted RBP4.22□□□□□ -1.73
GYPA-205ENST00000508337 ARMCX3Q9UH62 379 aaPredicted RBP4.22□□□□□ -1.73
GYPA-205ENST00000508337 AUP1Q9Y679 476 aa4.22□□□□□ -1.73
GYPA-205ENST00000508337 ABCC9O60706 1549 aa4.21□□□□□ -1.73
GYPA-205ENST00000508337 ACOD1A6NK06 481 aa4.21□□□□□ -1.74
GYPA-205ENST00000508337 NDC80O14777 642 aa4.21□□□□□ -1.74
GYPA-205ENST00000508337 SCO2O43819 266 aa4.21□□□□□ -1.74
GYPA-205ENST00000508337 CD1DP15813 335 aa4.21□□□□□ -1.74
GYPA-205ENST00000508337 MAPK3P27361 379 aaPredicted RBP4.21□□□□□ -1.74
GYPA-205ENST00000508337 DUTP33316 252 aaKnown RBP4.21□□□□□ -1.74
GYPA-205ENST00000508337 FEN1P39748 380 aaKnown RBP4.21□□□□□ -1.74
GYPA-205ENST00000508337 PTGER3P43115 390 aa4.21□□□□□ -1.74
GYPA-205ENST00000508337 CLCN4P51793 760 aa4.21□□□□□ -1.74
GYPA-205ENST00000508337 RIDAP52758 137 aaKnown RBP4.21□□□□□ -1.74
GYPA-205ENST00000508337 BTG1P62324 171 aa4.21□□□□□ -1.74
GYPA-205ENST00000508337 RPP38P78345 283 aaKnown RBP4.21□□□□□ -1.74
GYPA-205ENST00000508337 MAP2K1Q02750 393 aaPredicted RBP4.21□□□□□ -1.74
GYPA-205ENST00000508337 DMTNQ08495 405 aa4.21□□□□□ -1.74
GYPA-205ENST00000508337 LY6DQ14210 128 aa4.21□□□□□ -1.74
GYPA-205ENST00000508337 ZNF239Q16600 458 aaKnown RBP4.21□□□□□ -1.74
GYPA-205ENST00000508337 MAJINQ3KP22 176 aa4.21□□□□□ -1.74
GYPA-205ENST00000508337 SPANXN4Q5MJ08 99 aa4.21□□□□□ -1.74
GYPA-205ENST00000508337 SLC27A4Q6P1M0 643 aa4.21□□□□□ -1.74
GYPA-205ENST00000508337 MSANTD1Q6ZTZ1 278 aa4.21□□□□□ -1.74
GYPA-205ENST00000508337 RFPL4BQ6ZWI9 263 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms