RNA–Protein interactions for RNA: ENST00000508169.1

COL6A4P1-204, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 3

Gene COL6A4P1, Length 527 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-204ENST00000508169 CD48P09326 243 aa5.89□□□□□ -1.47
COL6A4P1-204ENST00000508169 UBTFL1P0CB47 393 aaPredicted RBP5.89□□□□□ -1.47
COL6A4P1-204ENST00000508169 VCLP18206 1134 aa5.89□□□□□ -1.47
COL6A4P1-204ENST00000508169 ANOS1P23352 680 aa5.89□□□□□ -1.47
COL6A4P1-204ENST00000508169 SLC39A6Q13433 755 aa5.89□□□□□ -1.47
COL6A4P1-204ENST00000508169 SLC24A5Q71RS6 500 aa5.89□□□□□ -1.47
COL6A4P1-204ENST00000508169 APLFQ8IW19 511 aaPredicted RBP5.89□□□□□ -1.47
COL6A4P1-204ENST00000508169 CNPY4Q8N129 248 aa5.89□□□□□ -1.47
COL6A4P1-204ENST00000508169 LPCAT1Q8NF37 534 aa5.89□□□□□ -1.47
COL6A4P1-204ENST00000508169 GPRC5AQ8NFJ5 357 aa5.89□□□□□ -1.47
COL6A4P1-204ENST00000508169 TRIM58Q8NG06 486 aa5.89□□□□□ -1.47
COL6A4P1-204ENST00000508169 MGARPQ8TDB4 240 aa5.89□□□□□ -1.47
COL6A4P1-204ENST00000508169 PDLIM5Q96HC4 596 aaKnown RBP5.89□□□□□ -1.47
COL6A4P1-204ENST00000508169 C10orf90Q96M02 699 aa5.89□□□□□ -1.47
COL6A4P1-204ENST00000508169 PIGQQ9BRB3 760 aa5.89□□□□□ -1.47
COL6A4P1-204ENST00000508169 PI4K2AQ9BTU6 479 aa5.89□□□□□ -1.47
COL6A4P1-204ENST00000508169 IDI2Q9BXS1 227 aa5.89□□□□□ -1.47
COL6A4P1-204ENST00000508169 NACAP1Q9BZK3 213 aa5.89□□□□□ -1.47
COL6A4P1-204ENST00000508169 CUEDC2Q9H467 287 aa5.89□□□□□ -1.47
COL6A4P1-204ENST00000508169 ZNF71Q9NQZ8 489 aaPredicted RBP5.89□□□□□ -1.47
COL6A4P1-204ENST00000508169 GPR173Q9NS66 373 aa5.89□□□□□ -1.47
COL6A4P1-204ENST00000508169 TMOD3Q9NYL9 352 aa5.89□□□□□ -1.47
COL6A4P1-204ENST00000508169 SPG21Q9NZD8 308 aa5.89□□□□□ -1.47
COL6A4P1-204ENST00000508169 PRDM4Q9UKN5 801 aa5.89□□□□□ -1.47
COL6A4P1-204ENST00000508169 KCPQ6ZWJ8 1503 aa5.89□□□□□ -1.47
COL6A4P1-204ENST00000508169 A0A0A6YYC8 382 aaPredicted RBP5.88□□□□□ -1.47
COL6A4P1-204ENST00000508169 I3L1I5 382 aaPredicted RBP5.88□□□□□ -1.47
COL6A4P1-204ENST00000508169 DDX39AO00148 427 aaKnown RBP5.88□□□□□ -1.47
COL6A4P1-204ENST00000508169 SCO2O43819 266 aa5.88□□□□□ -1.47
COL6A4P1-204ENST00000508169 HMGB2P26583 209 aaKnown RBP5.88□□□□□ -1.47
COL6A4P1-204ENST00000508169 MAP2K2P36507 400 aa5.88□□□□□ -1.47
COL6A4P1-204ENST00000508169 MAGEB1P43366 347 aa5.88□□□□□ -1.47
COL6A4P1-204ENST00000508169 OR3A3P47888 321 aa5.88□□□□□ -1.47
COL6A4P1-204ENST00000508169 ADARP55265 1226 aaKnown RBP5.88□□□□□ -1.47
COL6A4P1-204ENST00000508169 KIAA1024LP59773 190 aa5.88□□□□□ -1.47
COL6A4P1-204ENST00000508169 ACTN3Q08043 901 aaPredicted RBP5.88□□□□□ -1.47
COL6A4P1-204ENST00000508169 ZNF74Q16587 644 aa5.88□□□□□ -1.47
COL6A4P1-204ENST00000508169 RABL6Q3YEC7 729 aaPredicted RBP5.88□□□□□ -1.47
COL6A4P1-204ENST00000508169 PM20D1Q6GTS8 502 aa5.88□□□□□ -1.47
COL6A4P1-204ENST00000508169 OR4C11Q6IEV9 310 aa5.88□□□□□ -1.47
COL6A4P1-204ENST00000508169 FAM53AQ6NSI3 398 aaPredicted RBP5.88□□□□□ -1.47
COL6A4P1-204ENST00000508169 MEX3BQ6ZN04 569 aaKnown RBP5.88□□□□□ -1.47
COL6A4P1-204ENST00000508169 COPS6Q7L5N1 327 aa5.88□□□□□ -1.47
COL6A4P1-204ENST00000508169 TMEM178AQ8NBL3 297 aa5.88□□□□□ -1.47
COL6A4P1-204ENST00000508169 PSMA8Q8TAA3 256 aa5.88□□□□□ -1.47
COL6A4P1-204ENST00000508169 APOBEC4Q8WW27 367 aaKnown RBP5.88□□□□□ -1.47
COL6A4P1-204ENST00000508169 RASL10BQ96S79 203 aa5.88□□□□□ -1.47
COL6A4P1-204ENST00000508169 ZNF559Q9BR84 538 aa5.88□□□□□ -1.47
COL6A4P1-204ENST00000508169 ATP13A3Q9H7F0 1226 aa5.88□□□□□ -1.47
COL6A4P1-204ENST00000508169 AKIRIN1Q9H9L7 192 aaPredicted RBP5.88□□□□□ -1.47
COL6A4P1-204ENST00000508169 RPF1Q9H9Y2 349 aaKnown RBP5.88□□□□□ -1.47
COL6A4P1-204ENST00000508169 FBXW2Q9UKT8 454 aa5.88□□□□□ -1.47
COL6A4P1-204ENST00000508169 COLEC10Q9Y6Z7 277 aa5.88□□□□□ -1.47
COL6A4P1-204ENST00000508169 PFASO15067 1338 aa5.88□□□□□ -1.47
COL6A4P1-204ENST00000508169 BCL9LQ86UU0 1499 aa5.88□□□□□ -1.47
COL6A4P1-204ENST00000508169 GLI3P10071 1580 aa5.88□□□□□ -1.47
COL6A4P1-204ENST00000508169 NRAPQ86VF7 1730 aa5.88□□□□□ -1.47
COL6A4P1-204ENST00000508169 KIAA1217Q5T5P2 1943 aa5.87□□□□□ -1.47
COL6A4P1-204ENST00000508169 IGHV4-4A0A075B6R2 117 aa5.87□□□□□ -1.47
COL6A4P1-204ENST00000508169 FAM149AA5PLN7 773 aa5.87□□□□□ -1.47
COL6A4P1-204ENST00000508169 ERVV-1B6SEH8 477 aa5.87□□□□□ -1.47
COL6A4P1-204ENST00000508169 PGRMC2O15173 223 aa5.87□□□□□ -1.47
COL6A4P1-204ENST00000508169 TEX28O15482 410 aa5.87□□□□□ -1.47
COL6A4P1-204ENST00000508169 ACSL4O60488 711 aa5.87□□□□□ -1.47
COL6A4P1-204ENST00000508169 AP2A2O94973 939 aa5.87□□□□□ -1.47
COL6A4P1-204ENST00000508169 SEC24AO95486 1093 aa5.87□□□□□ -1.47
COL6A4P1-204ENST00000508169 PAK4O96013 591 aaPredicted RBP5.87□□□□□ -1.47
COL6A4P1-204ENST00000508169 PNPP00491 289 aa5.87□□□□□ -1.47
COL6A4P1-204ENST00000508169 IGKV5-2P06315 115 aa5.87□□□□□ -1.47
COL6A4P1-204ENST00000508169 HMBSP08397 361 aa5.87□□□□□ -1.47
COL6A4P1-204ENST00000508169 SLC2A2P11168 524 aaPredicted RBP5.87□□□□□ -1.47
COL6A4P1-204ENST00000508169 GOT1P17174 413 aa5.87□□□□□ -1.47
COL6A4P1-204ENST00000508169 HLA-DPA1P20036 260 aa5.87□□□□□ -1.47
COL6A4P1-204ENST00000508169 RBMS1P29558 406 aaKnown RBP5.87□□□□□ -1.47
COL6A4P1-204ENST00000508169 CHRNB4P30926 498 aa5.87□□□□□ -1.47
COL6A4P1-204ENST00000508169 CDKN1AP38936 164 aa5.87□□□□□ -1.47
COL6A4P1-204ENST00000508169 ANP32AP39687 249 aaKnown RBP5.87□□□□□ -1.47
COL6A4P1-204ENST00000508169 AP1B1Q10567 949 aa5.87□□□□□ -1.47
COL6A4P1-204ENST00000508169 ABRQ12979 859 aa5.87□□□□□ -1.47
COL6A4P1-204ENST00000508169 RPA4Q13156 261 aa5.87□□□□□ -1.47
COL6A4P1-204ENST00000508169 SGCGQ13326 291 aa5.87□□□□□ -1.47
COL6A4P1-204ENST00000508169 GCKRQ14397 625 aa5.87□□□□□ -1.47
COL6A4P1-204ENST00000508169 TEAD2Q15562 447 aa5.87□□□□□ -1.47
COL6A4P1-204ENST00000508169 ZNF542PQ5EBM4 170 aa5.87□□□□□ -1.47
COL6A4P1-204ENST00000508169 LCE1AQ5T7P2 110 aa5.87□□□□□ -1.47
COL6A4P1-204ENST00000508169 SLC25A47Q6Q0C1 308 aa5.87□□□□□ -1.47
COL6A4P1-204ENST00000508169 FCRLAQ7L513 359 aa5.87□□□□□ -1.47
COL6A4P1-204ENST00000508169 PPP1R42Q7Z4L9 355 aa5.87□□□□□ -1.47
COL6A4P1-204ENST00000508169 ERC1Q8IUD2 1116 aa5.87□□□□□ -1.47
COL6A4P1-204ENST00000508169 GPC2Q8N158 579 aa5.87□□□□□ -1.47
COL6A4P1-204ENST00000508169 FAM89BQ8N5H3 189 aa5.87□□□□□ -1.47
COL6A4P1-204ENST00000508169 GPATCH11Q8N954 259 aa5.87□□□□□ -1.47
COL6A4P1-204ENST00000508169 BCL2L2Q92843 193 aaPredicted RBP5.87□□□□□ -1.47
COL6A4P1-204ENST00000508169 ACAT2Q9BWD1 397 aa5.87□□□□□ -1.47
COL6A4P1-204ENST00000508169 OSBPL8Q9BZF1 889 aa5.87□□□□□ -1.47
COL6A4P1-204ENST00000508169 EGLN3Q9H6Z9 239 aa5.87□□□□□ -1.47
COL6A4P1-204ENST00000508169 DBNDD1Q9H9R9 158 aa5.87□□□□□ -1.47
COL6A4P1-204ENST00000508169 TBC1D13Q9NVG8 400 aa5.87□□□□□ -1.47
COL6A4P1-204ENST00000508169 INTS10Q9NVR2 710 aaKnown RBP5.87□□□□□ -1.47
COL6A4P1-204ENST00000508169 EPHA6Q9UF33 1036 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms