RNA–Protein interactions for RNA: ENST00000508085.1

CDHR2-204, Transcript of cadherin related family member 2, human

TSL 2

Gene CDHR2, Length 577 nt, Biotype retained intron, Subcellular localisation Exosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDHR2-204	ENST00000508085	ISL2	Q96A47	359 aa		12.9	□□□□□ -0.34
CDHR2-204	ENST00000508085	ZNF354B	Q96LW1	612 aa		12.9	□□□□□ -0.34
CDHR2-204	ENST00000508085	F2RL3	Q96RI0	385 aa		12.9	□□□□□ -0.34
CDHR2-204	ENST00000508085	CSF3R	Q99062	836 aa		12.9	□□□□□ -0.34
CDHR2-204	ENST00000508085	NPL	Q9BXD5	320 aa	Predicted RBP	12.9	□□□□□ -0.34
CDHR2-204	ENST00000508085	MS4A8	Q9BY19	250 aa		12.9	□□□□□ -0.34
CDHR2-204	ENST00000508085	REXO4	Q9GZR2	422 aa	Known RBP	12.9	□□□□□ -0.34
CDHR2-204	ENST00000508085	CSTF2T	Q9H0L4	616 aa	Known RBP eCLIP	12.9	□□□□□ -0.34
CDHR2-204	ENST00000508085	OPTC	Q9UBM4	332 aa		12.9	□□□□□ -0.34
CDHR2-204	ENST00000508085	ERRFI1	Q9UJM3	462 aa	Predicted RBP	12.9	□□□□□ -0.34
CDHR2-204	ENST00000508085	PCNX1	Q96RV3	2341 aa		12.9	□□□□□ -0.34
CDHR2-204	ENST00000508085	SAGE2P	A6NJ88	616 aa		12.89	□□□□□ -0.35
CDHR2-204	ENST00000508085	B3GALT2	O43825	422 aa		12.89	□□□□□ -0.35
CDHR2-204	ENST00000508085	KLK8	O60259	260 aa		12.89	□□□□□ -0.35
CDHR2-204	ENST00000508085	PRAMEF2	O60811	474 aa		12.89	□□□□□ -0.35
CDHR2-204	ENST00000508085	KLHL2	O95198	593 aa		12.89	□□□□□ -0.35
CDHR2-204	ENST00000508085	EDN3	P14138	238 aa		12.89	□□□□□ -0.35
CDHR2-204	ENST00000508085	MSH2	P43246	934 aa		12.89	□□□□□ -0.35
CDHR2-204	ENST00000508085	SRSF11	Q05519	484 aa	Known RBP	12.89	□□□□□ -0.35
CDHR2-204	ENST00000508085	TUBA3C	Q13748	450 aa		12.89	□□□□□ -0.35
CDHR2-204	ENST00000508085	NAA30	Q147X3	362 aa	Predicted RBP	12.89	□□□□□ -0.35
CDHR2-204	ENST00000508085	ACAP2	Q15057	778 aa		12.89	□□□□□ -0.35
CDHR2-204	ENST00000508085	INA	Q16352	499 aa		12.89	□□□□□ -0.35
CDHR2-204	ENST00000508085	MEP1A	Q16819	746 aa		12.89	□□□□□ -0.35
CDHR2-204	ENST00000508085	FAM83E	Q2M2I3	478 aa		12.89	□□□□□ -0.35
CDHR2-204	ENST00000508085	GLE1	Q53GS7	698 aa	Known RBP	12.89	□□□□□ -0.35
CDHR2-204	ENST00000508085	TECRL	Q5HYJ1	363 aa		12.89	□□□□□ -0.35
CDHR2-204	ENST00000508085	PAGE2B	Q5JRK9	111 aa		12.89	□□□□□ -0.35
CDHR2-204	ENST00000508085	TRIM40	Q6P9F5	258 aa		12.89	□□□□□ -0.35
CDHR2-204	ENST00000508085	TUBA3E	Q6PEY2	450 aa		12.89	□□□□□ -0.35
CDHR2-204	ENST00000508085	CEP128	Q6ZU80	1094 aa		12.89	□□□□□ -0.35
CDHR2-204	ENST00000508085	LAS2	Q8IYD9	372 aa		12.89	□□□□□ -0.35
CDHR2-204	ENST00000508085	RNF175	Q8N4F7	328 aa		12.89	□□□□□ -0.35
CDHR2-204	ENST00000508085	TEX9	Q8N6V9	391 aa		12.89	□□□□□ -0.35
CDHR2-204	ENST00000508085	BCORP1	Q8N888	145 aa		12.89	□□□□□ -0.35
CDHR2-204	ENST00000508085	FAM47B	Q8NA70	645 aa		12.89	□□□□□ -0.35
CDHR2-204	ENST00000508085	MDS2	Q8NDY4	140 aa		12.89	□□□□□ -0.35
CDHR2-204	ENST00000508085	ZNF473	Q8WTR7	871 aa	Known RBP	12.89	□□□□□ -0.35
CDHR2-204	ENST00000508085	SSC4D	Q8WTU2	575 aa		12.89	□□□□□ -0.35
CDHR2-204	ENST00000508085	SIGLEC12	Q96PQ1	595 aa		12.89	□□□□□ -0.35
CDHR2-204	ENST00000508085	SERINC2	Q96SA4	455 aa		12.89	□□□□□ -0.35
CDHR2-204	ENST00000508085	PAFAH2	Q99487	392 aa		12.89	□□□□□ -0.35
CDHR2-204	ENST00000508085	PRDM7	Q9NQW5	492 aa		12.89	□□□□□ -0.35
CDHR2-204	ENST00000508085	ZNF358	Q9NW07	568 aa		12.89	□□□□□ -0.35
CDHR2-204	ENST00000508085	TEKT2	Q9UIF3	430 aa		12.89	□□□□□ -0.35
CDHR2-204	ENST00000508085	MMACHC	Q9Y4U1	282 aa		12.89	□□□□□ -0.35
CDHR2-204	ENST00000508085	CELSR2	Q9HCU4	2923 aa		12.89	□□□□□ -0.35
CDHR2-204	ENST00000508085	ITPR2	Q14571	2701 aa		12.89	□□□□□ -0.35
CDHR2-204	ENST00000508085	CCDC189	A1A4V9	331 aa		12.88	□□□□□ -0.35
CDHR2-204	ENST00000508085	SYCE1L	A8MT33	242 aa		12.88	□□□□□ -0.35
CDHR2-204	ENST00000508085		A8MUA0	341 aa		12.88	□□□□□ -0.35
CDHR2-204	ENST00000508085	KIF2A	O00139	706 aa	Predicted RBP	12.88	□□□□□ -0.35
CDHR2-204	ENST00000508085	CYR61	O00622	381 aa		12.88	□□□□□ -0.35
CDHR2-204	ENST00000508085	SH3BGRL	O75368	114 aa		12.88	□□□□□ -0.35
CDHR2-204	ENST00000508085	LDLR	P01130	860 aa		12.88	□□□□□ -0.35
CDHR2-204	ENST00000508085	GP1BB	P13224	206 aa		12.88	□□□□□ -0.35
CDHR2-204	ENST00000508085	TYK2	P29597	1187 aa		12.88	□□□□□ -0.35
CDHR2-204	ENST00000508085	PPP2R1B	P30154	601 aa		12.88	□□□□□ -0.35
CDHR2-204	ENST00000508085	ALDH18A1	P54886	795 aa	Known RBP	12.88	□□□□□ -0.35
CDHR2-204	ENST00000508085	MTTP	P55157	894 aa		12.88	□□□□□ -0.35
CDHR2-204	ENST00000508085	LIM2	P55344	173 aa		12.88	□□□□□ -0.35
CDHR2-204	ENST00000508085	HIST2H2AC	Q16777	129 aa	Predicted RBP	12.88	□□□□□ -0.35
CDHR2-204	ENST00000508085	PFKFB4	Q16877	469 aa		12.88	□□□□□ -0.35
CDHR2-204	ENST00000508085	HIST2H2AA3	Q6FI13	130 aa		12.88	□□□□□ -0.35
CDHR2-204	ENST00000508085	GRHL2	Q6ISB3	625 aa		12.88	□□□□□ -0.35
CDHR2-204	ENST00000508085	LGI4	Q8N135	537 aa		12.88	□□□□□ -0.35
CDHR2-204	ENST00000508085	SLC5A8	Q8N695	610 aa		12.88	□□□□□ -0.35
CDHR2-204	ENST00000508085	OR7G3	Q8NG95	312 aa		12.88	□□□□□ -0.35
CDHR2-204	ENST00000508085	UHMK1	Q8TAS1	419 aa	Known RBP	12.88	□□□□□ -0.35
CDHR2-204	ENST00000508085	DCAKD	Q8WVC6	231 aa		12.88	□□□□□ -0.35
CDHR2-204	ENST00000508085	HES7	Q9BYE0	225 aa		12.88	□□□□□ -0.35
CDHR2-204	ENST00000508085	VPS11	Q9H270	941 aa		12.88	□□□□□ -0.35
CDHR2-204	ENST00000508085	PRTFDC1	Q9NRG1	225 aa		12.88	□□□□□ -0.35
CDHR2-204	ENST00000508085	OLAH	Q9NV23	265 aa		12.88	□□□□□ -0.35
CDHR2-204	ENST00000508085	ANKRD10	Q9NXR5	420 aa		12.88	□□□□□ -0.35
CDHR2-204	ENST00000508085	KCMF1	Q9P0J7	381 aa		12.88	□□□□□ -0.35
CDHR2-204	ENST00000508085	DAPP1	Q9UN19	280 aa		12.88	□□□□□ -0.35
CDHR2-204	ENST00000508085	TEX15	Q9BXT5	2789 aa		12.88	□□□□□ -0.35
CDHR2-204	ENST00000508085		A0A088AWK7	358 aa		12.87	□□□□□ -0.35
CDHR2-204	ENST00000508085	WIPF3	A6NGB9	483 aa		12.87	□□□□□ -0.35
CDHR2-204	ENST00000508085	GABRR3	A8MPY1	467 aa		12.87	□□□□□ -0.35
CDHR2-204	ENST00000508085	RTCA	O00442	366 aa	Known RBP	12.87	□□□□□ -0.35
CDHR2-204	ENST00000508085	SIX3	O95343	332 aa	Predicted RBP	12.87	□□□□□ -0.35
CDHR2-204	ENST00000508085	TUBB4A	P04350	444 aa		12.87	□□□□□ -0.35
CDHR2-204	ENST00000508085	INHBA	P08476	426 aa		12.87	□□□□□ -0.35
CDHR2-204	ENST00000508085	PCNA	P12004	261 aa		12.87	□□□□□ -0.35
CDHR2-204	ENST00000508085	GFAP	P14136	432 aa		12.87	□□□□□ -0.35
CDHR2-204	ENST00000508085	EPB42	P16452	691 aa		12.87	□□□□□ -0.35
CDHR2-204	ENST00000508085	ZNF10	P21506	573 aa	Predicted RBP	12.87	□□□□□ -0.35
CDHR2-204	ENST00000508085	MST1	P26927	711 aa		12.87	□□□□□ -0.35
CDHR2-204	ENST00000508085	HPD	P32754	393 aa	Predicted RBP	12.87	□□□□□ -0.35
CDHR2-204	ENST00000508085	CD96	P40200	585 aa		12.87	□□□□□ -0.35
CDHR2-204	ENST00000508085	HSD17B7	P56937	341 aa		12.87	□□□□□ -0.35
CDHR2-204	ENST00000508085	PMP22	Q01453	160 aa		12.87	□□□□□ -0.35
CDHR2-204	ENST00000508085	ELOA	Q14241	798 aa	Known RBP	12.87	□□□□□ -0.35
CDHR2-204	ENST00000508085	PCBP2	Q15366	365 aa	Known RBP eCLIP	12.87	□□□□□ -0.35
CDHR2-204	ENST00000508085	ZNF766	Q5HY98	468 aa		12.87	□□□□□ -0.35
CDHR2-204	ENST00000508085	ZNF468	Q5VIY5	522 aa	Predicted RBP	12.87	□□□□□ -0.35
CDHR2-204	ENST00000508085	MED27	Q6P2C8	311 aa		12.87	□□□□□ -0.35
CDHR2-204	ENST00000508085	ZNF595	Q8IYB9	648 aa		12.87	□□□□□ -0.35

Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms