RNA–Protein interactions for RNA: ENST00000507784.5

RNF4-209, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-209ENST00000507784 GLB1L3Q8NCI6 653 aaPredicted RBP16.56■□□□□ 0.24
RNF4-209ENST00000507784 AGBL5Q8NDL9 886 aa16.56■□□□□ 0.24
RNF4-209ENST00000507784 OR9A4Q8NGU2 314 aa16.56■□□□□ 0.24
RNF4-209ENST00000507784 SPDL1Q96EA4 605 aa16.56■□□□□ 0.24
RNF4-209ENST00000507784 PRPF18Q99633 342 aaKnown RBP16.56■□□□□ 0.24
RNF4-209ENST00000507784 MAPKAP1Q9BPZ7 522 aa16.56■□□□□ 0.24
RNF4-209ENST00000507784 NDC1Q9BTX1 674 aa16.56■□□□□ 0.24
RNF4-209ENST00000507784 SLC25A23Q9BV35 468 aa16.56■□□□□ 0.24
RNF4-209ENST00000507784 FAIM2Q9BWQ8 316 aa16.56■□□□□ 0.24
RNF4-209ENST00000507784 REEP4Q9H6H4 257 aa16.56■□□□□ 0.24
RNF4-209ENST00000507784 CUTCQ9NTM9 273 aa16.56■□□□□ 0.24
RNF4-209ENST00000507784 TXLNGQ9NUQ3 528 aa16.56■□□□□ 0.24
RNF4-209ENST00000507784 SH3BP4Q9P0V3 963 aa16.56■□□□□ 0.24
RNF4-209ENST00000507784 MAPRE3Q9UPY8 281 aa16.56■□□□□ 0.24
RNF4-209ENST00000507784 AIM2O14862 343 aa16.55■□□□□ 0.24
RNF4-209ENST00000507784 ANGPT2O15123 496 aa16.55■□□□□ 0.24
RNF4-209ENST00000507784 SCAMP2O15127 329 aaKnown RBP16.55■□□□□ 0.24
RNF4-209ENST00000507784 GALR3O60755 368 aaPredicted RBP16.55■□□□□ 0.24
RNF4-209ENST00000507784 ATP5HO75947 161 aa16.55■□□□□ 0.24
RNF4-209ENST00000507784 MED26O95402 600 aa16.55■□□□□ 0.24
RNF4-209ENST00000507784 T-ENOLP0DO92 83 aa16.55■□□□□ 0.24
RNF4-209ENST00000507784 ALAS2P22557 587 aa16.55■□□□□ 0.24
RNF4-209ENST00000507784 CPN2P22792 545 aa16.55■□□□□ 0.24
RNF4-209ENST00000507784 RPL3P39023 403 aaKnown RBP16.55■□□□□ 0.24
RNF4-209ENST00000507784 GSTM5P46439 218 aa16.55■□□□□ 0.24
RNF4-209ENST00000507784 AVPR1BP47901 424 aa16.55■□□□□ 0.24
RNF4-209ENST00000507784 LIMK1P53667 647 aa16.55■□□□□ 0.24
RNF4-209ENST00000507784 HNRNPH2P55795 449 aaKnown RBP16.55■□□□□ 0.24
RNF4-209ENST00000507784 CLDN6P56747 220 aa16.55■□□□□ 0.24
RNF4-209ENST00000507784 SKP1P63208 163 aa16.55■□□□□ 0.24
RNF4-209ENST00000507784 KLC1Q07866 573 aa16.55■□□□□ 0.24
RNF4-209ENST00000507784 FAM174BQ3ZCQ3 159 aa16.55■□□□□ 0.24
RNF4-209ENST00000507784 DHRS13Q6UX07 377 aa16.55■□□□□ 0.24
RNF4-209ENST00000507784 TTLL10Q6ZVT0 673 aa16.55■□□□□ 0.24
RNF4-209ENST00000507784 IKBIPQ70UQ0 350 aa16.55■□□□□ 0.24
RNF4-209ENST00000507784 GPR180Q86V85 440 aa16.55■□□□□ 0.24
RNF4-209ENST00000507784 OR7A2PQ8NGA2 310 aa16.55■□□□□ 0.24
RNF4-209ENST00000507784 STARD8Q92502 1023 aa16.55■□□□□ 0.24
RNF4-209ENST00000507784 RNF31Q96EP0 1072 aa16.55■□□□□ 0.24
RNF4-209ENST00000507784 C10orf90Q96M02 699 aa16.55■□□□□ 0.24
RNF4-209ENST00000507784 NPAS2Q99743 824 aa16.55■□□□□ 0.24
RNF4-209ENST00000507784 STRADBQ9C0K7 418 aa16.55■□□□□ 0.24
RNF4-209ENST00000507784 CLMPQ9H6B4 373 aa16.55■□□□□ 0.24
RNF4-209ENST00000507784 MIEF1Q9NQG6 463 aa16.55■□□□□ 0.24
RNF4-209ENST00000507784 TMEM45AQ9NWC5 275 aa16.55■□□□□ 0.24
RNF4-209ENST00000507784 TEX10Q9NXF1 929 aaPredicted RBP16.55■□□□□ 0.24
RNF4-209ENST00000507784 RAPGEFL1Q9UHV5 662 aa16.55■□□□□ 0.24
RNF4-209ENST00000507784 CLCA2Q9UQC9 943 aa16.55■□□□□ 0.24
RNF4-209ENST00000507784 WBP11Q9Y2W2 641 aaKnown RBP16.55■□□□□ 0.24
RNF4-209ENST00000507784 NDUFAF1Q9Y375 327 aa16.55■□□□□ 0.24
RNF4-209ENST00000507784 ASB4Q9Y574 426 aa16.55■□□□□ 0.24
RNF4-209ENST00000507784 PCDHGA1Q9Y5H4 931 aa16.55■□□□□ 0.24
RNF4-209ENST00000507784 OTOGLQ3ZCN5 2332 aa16.54■□□□□ 0.24
RNF4-209ENST00000507784 SPAARA0A1B0GVQ0 90 aa16.54■□□□□ 0.24
RNF4-209ENST00000507784 FITM1A5D6W6 292 aa16.54■□□□□ 0.24
RNF4-209ENST00000507784 GABRR3A8MPY1 467 aa16.54■□□□□ 0.24
RNF4-209ENST00000507784 B2RBV5 119 aa16.54■□□□□ 0.24
RNF4-209ENST00000507784 TMX2-CTNND1H3BSU7 103 aa16.54■□□□□ 0.24
RNF4-209ENST00000507784 CFLARO15519 480 aa16.54■□□□□ 0.24
RNF4-209ENST00000507784 ZNF749O43361 778 aa16.54■□□□□ 0.24
RNF4-209ENST00000507784 DNAJB6O75190 326 aa16.54■□□□□ 0.24
RNF4-209ENST00000507784 RDH16O75452 317 aa16.54■□□□□ 0.24
RNF4-209ENST00000507784 MT-CO3P00414 261 aa16.54■□□□□ 0.24
RNF4-209ENST00000507784 IL6P05231 212 aa16.54■□□□□ 0.24
RNF4-209ENST00000507784 MSL3P1P0C860 447 aa16.54■□□□□ 0.24
RNF4-209ENST00000507784 CAPN3P20807 821 aa16.54■□□□□ 0.24
RNF4-209ENST00000507784 ZFP36L2P47974 494 aaKnown RBP16.54■□□□□ 0.24
RNF4-209ENST00000507784 ARSFP54793 590 aa16.54■□□□□ 0.24
RNF4-209ENST00000507784 HEPACAMQ14CZ8 416 aa16.54■□□□□ 0.24
RNF4-209ENST00000507784 UGT8Q16880 541 aa16.54■□□□□ 0.24
RNF4-209ENST00000507784 TIGD2Q4W5G0 525 aa16.54■□□□□ 0.24
RNF4-209ENST00000507784 SPANXN4Q5MJ08 99 aa16.54■□□□□ 0.24
RNF4-209ENST00000507784 CPTPQ5TA50 214 aa16.54■□□□□ 0.24
RNF4-209ENST00000507784 PRAMEF17Q5VTA0 474 aa16.54■□□□□ 0.24
RNF4-209ENST00000507784 MRM1Q6IN84 353 aaKnown RBP16.54■□□□□ 0.24
RNF4-209ENST00000507784 R3HCC1LQ7Z5L2 792 aaKnown RBP16.54■□□□□ 0.24
RNF4-209ENST00000507784 PDSS2Q86YH6 399 aa16.54■□□□□ 0.24
RNF4-209ENST00000507784 RIMKLAQ8IXN7 391 aa16.54■□□□□ 0.24
RNF4-209ENST00000507784 MMP21Q8N119 569 aa16.54■□□□□ 0.24
RNF4-209ENST00000507784 DTWD1Q8N5C7 304 aa16.54■□□□□ 0.24
RNF4-209ENST00000507784 VPS33AQ96AX1 596 aa16.54■□□□□ 0.24
RNF4-209ENST00000507784 PPCDCQ96CD2 204 aa16.54■□□□□ 0.24
RNF4-209ENST00000507784 RCN3Q96D15 328 aa16.54■□□□□ 0.24
RNF4-209ENST00000507784 MMABQ96EY8 250 aaPredicted RBP16.54■□□□□ 0.24
RNF4-209ENST00000507784 YIPF2Q9BWQ6 316 aa16.54■□□□□ 0.24
RNF4-209ENST00000507784 PHF11Q9UIL8 331 aa16.54■□□□□ 0.24
RNF4-209ENST00000507784 SPACA6W5XKT8 324 aa16.54■□□□□ 0.24
RNF4-209ENST00000507784 A0A1W2PR48 441 aa16.53■□□□□ 0.24
RNF4-209ENST00000507784 FOXS1O43638 330 aa16.53■□□□□ 0.24
RNF4-209ENST00000507784 HYAL3O43820 417 aaPredicted RBP16.53■□□□□ 0.24
RNF4-209ENST00000507784 SCELO95171 688 aa16.53■□□□□ 0.24
RNF4-209ENST00000507784 FURINP09958 794 aa16.53■□□□□ 0.24
RNF4-209ENST00000507784 CCKBRP32239 447 aa16.53■□□□□ 0.24
RNF4-209ENST00000507784 MNAT1P51948 309 aa16.53■□□□□ 0.24
RNF4-209ENST00000507784 PDX1P52945 283 aa16.53■□□□□ 0.24
RNF4-209ENST00000507784 EMP3P54852 163 aa16.53■□□□□ 0.24
RNF4-209ENST00000507784 LIM2P55344 173 aa16.53■□□□□ 0.24
RNF4-209ENST00000507784 PLIN5Q00G26 463 aa16.53■□□□□ 0.24
RNF4-209ENST00000507784 SRSF11Q05519 484 aaKnown RBP16.53■□□□□ 0.24
RNF4-209ENST00000507784 ART3Q13508 389 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms