RNA–Protein interactions for RNA: ENST00000506161.5

PDLIM7-215, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-215ENST00000506161 NR4A3Q92570 626 aa15.66■□□□□ 0.1
PDLIM7-215ENST00000506161 SORBS1Q9BX66 1292 aaKnown RBP15.66■□□□□ 0.1
PDLIM7-215ENST00000506161 CDC42EP4Q9H3Q1 356 aaKnown RBP15.66■□□□□ 0.1
PDLIM7-215ENST00000506161 CDCP1Q9H5V8 836 aa15.66■□□□□ 0.1
PDLIM7-215ENST00000506161 PRDM7Q9NQW5 492 aa15.66■□□□□ 0.1
PDLIM7-215ENST00000506161 OLAHQ9NV23 265 aa15.66■□□□□ 0.1
PDLIM7-215ENST00000506161 NUDT4Q9NZJ9 180 aa15.66■□□□□ 0.1
PDLIM7-215ENST00000506161 CELSR2Q9HCU4 2923 aa15.65■□□□□ 0.1
PDLIM7-215ENST00000506161 SAGE2PA6NJ88 616 aa15.65■□□□□ 0.1
PDLIM7-215ENST00000506161 GABRR3A8MPY1 467 aa15.65■□□□□ 0.1
PDLIM7-215ENST00000506161 CYR61O00622 381 aa15.65■□□□□ 0.1
PDLIM7-215ENST00000506161 CLGNO14967 610 aa15.65■□□□□ 0.1
PDLIM7-215ENST00000506161 KERAO60938 352 aa15.65■□□□□ 0.1
PDLIM7-215ENST00000506161 H2AFYO75367 372 aaKnown RBP15.65■□□□□ 0.1
PDLIM7-215ENST00000506161 NEURL1O76050 574 aa15.65■□□□□ 0.1
PDLIM7-215ENST00000506161 JAK1P23458 1154 aa15.65■□□□□ 0.1
PDLIM7-215ENST00000506161 RAB38P57729 211 aa15.65■□□□□ 0.1
PDLIM7-215ENST00000506161 CKAP4Q07065 602 aaKnown RBP15.65■□□□□ 0.1
PDLIM7-215ENST00000506161 ZNF766Q5HY98 468 aa15.65■□□□□ 0.1
PDLIM7-215ENST00000506161 C16orf47Q6ZP98 133 aaPredicted RBP15.65■□□□□ 0.1
PDLIM7-215ENST00000506161 CLNKQ7Z7G1 428 aa15.65■□□□□ 0.1
PDLIM7-215ENST00000506161 TCAIMQ8N3R3 496 aa15.65■□□□□ 0.1
PDLIM7-215ENST00000506161 APCDD1LQ8NCL9 501 aa15.65■□□□□ 0.1
PDLIM7-215ENST00000506161 OR2L5Q8NG80 312 aa15.65■□□□□ 0.1
PDLIM7-215ENST00000506161 ZNF473Q8WTR7 871 aaKnown RBP15.65■□□□□ 0.1
PDLIM7-215ENST00000506161 SREK1Q8WXA9 508 aaKnown RBP15.65■□□□□ 0.1
PDLIM7-215ENST00000506161 ZNF592Q92610 1267 aa15.65■□□□□ 0.1
PDLIM7-215ENST00000506161 PTCD3Q96EY7 689 aaKnown RBP15.65■□□□□ 0.1
PDLIM7-215ENST00000506161 ZNF354BQ96LW1 612 aa15.65■□□□□ 0.1
PDLIM7-215ENST00000506161 MS4A8Q9BY19 250 aa15.65■□□□□ 0.1
PDLIM7-215ENST00000506161 EHD1Q9H4M9 534 aa15.65■□□□□ 0.1
PDLIM7-215ENST00000506161 PRDM9Q9NQV7 894 aa15.65■□□□□ 0.1
PDLIM7-215ENST00000506161 KLHL1Q9NR64 748 aa15.65■□□□□ 0.1
PDLIM7-215ENST00000506161 SLC5A6Q9Y289 635 aa15.65■□□□□ 0.1
PDLIM7-215ENST00000506161 C2CD3Q4AC94 2353 aa15.65■□□□□ 0.1
PDLIM7-215ENST00000506161 GTF3C1Q12789 2109 aa15.65■□□□□ 0.1
PDLIM7-215ENST00000506161 SAP18O00422 153 aaKnown RBP15.64■□□□□ 0.09
PDLIM7-215ENST00000506161 LRRTM2O43300 516 aa15.64■□□□□ 0.09
PDLIM7-215ENST00000506161 TPP2P29144 1249 aaPredicted RBP15.64■□□□□ 0.09
PDLIM7-215ENST00000506161 MSH2P43246 934 aa15.64■□□□□ 0.09
PDLIM7-215ENST00000506161 GPR143P51810 404 aa15.64■□□□□ 0.09
PDLIM7-215ENST00000506161 LIM2P55344 173 aa15.64■□□□□ 0.09
PDLIM7-215ENST00000506161 STXBP1P61764 594 aaKnown RBP15.64■□□□□ 0.09
PDLIM7-215ENST00000506161 NAB1Q13506 487 aa15.64■□□□□ 0.09
PDLIM7-215ENST00000506161 OR1C1Q15619 314 aa15.64■□□□□ 0.09
PDLIM7-215ENST00000506161 UAP1Q16222 522 aaPredicted RBP15.64■□□□□ 0.09
PDLIM7-215ENST00000506161 WHAMMP3Q1A5X7 153 aa15.64■□□□□ 0.09
PDLIM7-215ENST00000506161 C1QL3Q5VWW1 255 aa15.64■□□□□ 0.09
PDLIM7-215ENST00000506161 LRRC70Q7Z2Q7 622 aa15.64■□□□□ 0.09
PDLIM7-215ENST00000506161 KRT78Q8N1N4 520 aa15.64■□□□□ 0.09
PDLIM7-215ENST00000506161 BCORP1Q8N888 145 aa15.64■□□□□ 0.09
PDLIM7-215ENST00000506161 UHMK1Q8TAS1 419 aaKnown RBP15.64■□□□□ 0.09
PDLIM7-215ENST00000506161 STAG3L4Q8TBR4 150 aa15.64■□□□□ 0.09
PDLIM7-215ENST00000506161 MAPKAP1Q9BPZ7 522 aa15.64■□□□□ 0.09
PDLIM7-215ENST00000506161 FUT8Q9BYC5 575 aa15.64■□□□□ 0.09
PDLIM7-215ENST00000506161 REXO4Q9GZR2 422 aaKnown RBP15.64■□□□□ 0.09
PDLIM7-215ENST00000506161 ACSS3Q9H6R3 686 aa15.64■□□□□ 0.09
PDLIM7-215ENST00000506161 NMRAL1Q9HBL8 299 aa15.64■□□□□ 0.09
PDLIM7-215ENST00000506161 KCMF1Q9P0J7 381 aa15.64■□□□□ 0.09
PDLIM7-215ENST00000506161 NCOA6Q14686 2063 aaPredicted RBP15.63■□□□□ 0.09
PDLIM7-215ENST00000506161 URADA6NGE7 173 aa15.63■□□□□ 0.09
PDLIM7-215ENST00000506161 ANKDD1BA6NHY2 528 aa15.63■□□□□ 0.09
PDLIM7-215ENST00000506161 SIX3O95343 332 aaPredicted RBP15.63■□□□□ 0.09
PDLIM7-215ENST00000506161 ACSL3O95573 720 aa15.63■□□□□ 0.09
PDLIM7-215ENST00000506161 TGFB1P01137 390 aa15.63■□□□□ 0.09
PDLIM7-215ENST00000506161 CRABP2P29373 138 aa15.63■□□□□ 0.09
PDLIM7-215ENST00000506161 CASP2P42575 452 aa15.63■□□□□ 0.09
PDLIM7-215ENST00000506161 IRF8Q02556 426 aa15.63■□□□□ 0.09
PDLIM7-215ENST00000506161 ELOAQ14241 798 aaKnown RBP15.63■□□□□ 0.09
PDLIM7-215ENST00000506161 MEP1AQ16819 746 aa15.63■□□□□ 0.09
PDLIM7-215ENST00000506161 RNFT1Q5M7Z0 435 aa15.63■□□□□ 0.09
PDLIM7-215ENST00000506161 TBC1D1Q86TI0 1168 aaPredicted RBP15.63■□□□□ 0.09
PDLIM7-215ENST00000506161 LAS2Q8IYD9 372 aa15.63■□□□□ 0.09
PDLIM7-215ENST00000506161 ZNF321PQ8N8H1 164 aa15.63■□□□□ 0.09
PDLIM7-215ENST00000506161 THAP3Q8WTV1 239 aaPredicted RBP15.63■□□□□ 0.09
PDLIM7-215ENST00000506161 SCMH1Q96GD3 660 aa15.63■□□□□ 0.09
PDLIM7-215ENST00000506161 TSPAN10Q9H1Z9 355 aaPredicted RBP15.63■□□□□ 0.09
PDLIM7-215ENST00000506161 CNOT10Q9H9A5 744 aaKnown RBP15.63■□□□□ 0.09
PDLIM7-215ENST00000506161 LIN28AQ9H9Z2 209 aaKnown RBP15.63■□□□□ 0.09
PDLIM7-215ENST00000506161 CLK4Q9HAZ1 481 aaKnown RBP15.63■□□□□ 0.09
PDLIM7-215ENST00000506161 PRTFDC1Q9NRG1 225 aa15.63■□□□□ 0.09
PDLIM7-215ENST00000506161 DAPP1Q9UN19 280 aa15.63■□□□□ 0.09
PDLIM7-215ENST00000506161 ACOT9Q9Y305 439 aa15.63■□□□□ 0.09
PDLIM7-215ENST00000506161 NCKAP5O14513 1909 aa15.62■□□□□ 0.09
PDLIM7-215ENST00000506161 CSMD1Q96PZ7 3565 aa15.62■□□□□ 0.09
PDLIM7-215ENST00000506161 A0A096LPK6 155 aa15.62■□□□□ 0.09
PDLIM7-215ENST00000506161 TMEM200CA6NKL6 621 aa15.62■□□□□ 0.09
PDLIM7-215ENST00000506161 K7EPI3 171 aa15.62■□□□□ 0.09
PDLIM7-215ENST00000506161 PSMD12O00232 456 aaPredicted RBP15.62■□□□□ 0.09
PDLIM7-215ENST00000506161 KLK8O60259 260 aa15.62■□□□□ 0.09
PDLIM7-215ENST00000506161 MYO1DO94832 1006 aa15.62■□□□□ 0.09
PDLIM7-215ENST00000506161 RASAL1O95294 804 aa15.62■□□□□ 0.09
PDLIM7-215ENST00000506161 STSP08842 583 aa15.62■□□□□ 0.09
PDLIM7-215ENST00000506161 MAGEA12P43365 314 aa15.62■□□□□ 0.09
PDLIM7-215ENST00000506161 MLF1P58340 268 aa15.62■□□□□ 0.09
PDLIM7-215ENST00000506161 ID2Q02363 134 aa15.62■□□□□ 0.09
PDLIM7-215ENST00000506161 ILF2Q12905 390 aaKnown RBP15.62■□□□□ 0.09
PDLIM7-215ENST00000506161 SETDB1Q15047 1291 aa15.62■□□□□ 0.09
PDLIM7-215ENST00000506161 TBCCQ15814 346 aa15.62■□□□□ 0.09
PDLIM7-215ENST00000506161 TECRLQ5HYJ1 363 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms