RNA–Protein interactions for RNA: ENST00000506042.5

SQSTM1-210, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 921 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-210ENST00000506042 RNFT1Q5M7Z0 435 aa19.6■□□□□ 0.73
SQSTM1-210ENST00000506042 HSDL2Q6YN16 418 aa19.6■□□□□ 0.73
SQSTM1-210ENST00000506042 OR14A16Q8NHC5 309 aa19.6■□□□□ 0.73
SQSTM1-210ENST00000506042 ACTRT1Q8TDG2 376 aa19.6■□□□□ 0.73
SQSTM1-210ENST00000506042 RUNDC3BQ96NL0 473 aa19.6■□□□□ 0.73
SQSTM1-210ENST00000506042 TREX2Q9BQ50 279 aaPredicted RBP19.6■□□□□ 0.73
SQSTM1-210ENST00000506042 KCMF1Q9P0J7 381 aa19.6■□□□□ 0.73
SQSTM1-210ENST00000506042 COPS7AQ9UBW8 275 aa19.6■□□□□ 0.73
SQSTM1-210ENST00000506042 PPIEQ9UNP9 301 aaKnown RBP19.6■□□□□ 0.73
SQSTM1-210ENST00000506042 PPP2R2CQ9Y2T4 447 aa19.6■□□□□ 0.73
SQSTM1-210ENST00000506042 PCNX1Q96RV3 2341 aa19.6■□□□□ 0.73
SQSTM1-210ENST00000506042 FAM90A27PA6NNH2 459 aa19.59■□□□□ 0.73
SQSTM1-210ENST00000506042 ADAM10O14672 748 aa19.59■□□□□ 0.73
SQSTM1-210ENST00000506042 CLGNO14967 610 aa19.59■□□□□ 0.73
SQSTM1-210ENST00000506042 WISP2O76076 250 aa19.59■□□□□ 0.73
SQSTM1-210ENST00000506042 WDR47O94967 919 aa19.59■□□□□ 0.73
SQSTM1-210ENST00000506042 C1GALT1C1LP0DN25 315 aa19.59■□□□□ 0.73
SQSTM1-210ENST00000506042 COX7A2P14406 83 aa19.59■□□□□ 0.73
SQSTM1-210ENST00000506042 ZNF37AP17032 561 aaPredicted RBP19.59■□□□□ 0.73
SQSTM1-210ENST00000506042 GPR85P60893 370 aa19.59■□□□□ 0.73
SQSTM1-210ENST00000506042 PPIAP62937 165 aaKnown RBP19.59■□□□□ 0.73
SQSTM1-210ENST00000506042 CCZ1BP86790 482 aa19.59■□□□□ 0.73
SQSTM1-210ENST00000506042 CCZ1P86791 482 aaPredicted RBP19.59■□□□□ 0.73
SQSTM1-210ENST00000506042 HYAL2Q12891 473 aa19.59■□□□□ 0.73
SQSTM1-210ENST00000506042 SERTAD2Q14140 314 aa19.59■□□□□ 0.73
SQSTM1-210ENST00000506042 OPN5Q6U736 354 aa19.59■□□□□ 0.73
SQSTM1-210ENST00000506042 LRRC8AQ8IWT6 810 aa19.59■□□□□ 0.73
SQSTM1-210ENST00000506042 AMER2Q8N7J2 671 aa19.59■□□□□ 0.73
SQSTM1-210ENST00000506042 ANKRD53Q8N9V6 530 aa19.59■□□□□ 0.73
SQSTM1-210ENST00000506042 ACBD4Q8NC06 268 aa19.59■□□□□ 0.73
SQSTM1-210ENST00000506042 MORN4Q8NDC4 146 aa19.59■□□□□ 0.73
SQSTM1-210ENST00000506042 OR10Q1Q8NGQ4 319 aa19.59■□□□□ 0.73
SQSTM1-210ENST00000506042 NCLNQ969V3 563 aa19.59■□□□□ 0.73
SQSTM1-210ENST00000506042 CFAP36Q96G28 342 aa19.59■□□□□ 0.73
SQSTM1-210ENST00000506042 SGCZQ96LD1 299 aa19.59■□□□□ 0.73
SQSTM1-210ENST00000506042 SERINC2Q96SA4 455 aa19.59■□□□□ 0.73
SQSTM1-210ENST00000506042 FAM173AQ9BQD7 235 aa19.59■□□□□ 0.73
SQSTM1-210ENST00000506042 PLSCR2Q9NRY7 297 aa19.59■□□□□ 0.73
SQSTM1-210ENST00000506042 GPRC5BQ9NZH0 403 aa19.59■□□□□ 0.73
SQSTM1-210ENST00000506042 CTNNAL1Q9UBT7 734 aa19.59■□□□□ 0.73
SQSTM1-210ENST00000506042 RNF6Q9Y252 685 aa19.59■□□□□ 0.73
SQSTM1-210ENST00000506042 NEU2Q9Y3R4 380 aa19.59■□□□□ 0.73
SQSTM1-210ENST00000506042 OARD1Q9Y530 152 aa19.59■□□□□ 0.73
SQSTM1-210ENST00000506042 CES2O00748 559 aa19.58■□□□□ 0.72
SQSTM1-210ENST00000506042 CLEC3AO75596 197 aa19.58■□□□□ 0.72
SQSTM1-210ENST00000506042 HOXD4P09016 255 aaPredicted RBP19.58■□□□□ 0.72
SQSTM1-210ENST00000506042 SMIM10L1P0DMW3 83 aa19.58■□□□□ 0.72
SQSTM1-210ENST00000506042 TNNI3P19429 210 aa19.58■□□□□ 0.72
SQSTM1-210ENST00000506042 RFC3P40938 356 aa19.58■□□□□ 0.72
SQSTM1-210ENST00000506042 TIAL1Q01085 375 aaKnown RBP eCLIP19.58■□□□□ 0.72
SQSTM1-210ENST00000506042 MORF4L2Q15014 288 aa19.58■□□□□ 0.72
SQSTM1-210ENST00000506042 CDSNQ15517 529 aa19.58■□□□□ 0.72
SQSTM1-210ENST00000506042 HIST2H2ACQ16777 129 aaPredicted RBP19.58■□□□□ 0.72
SQSTM1-210ENST00000506042 PAGE2BQ5JRK9 111 aa19.58■□□□□ 0.72
SQSTM1-210ENST00000506042 TEDDM1Q5T9Z0 273 aa19.58■□□□□ 0.72
SQSTM1-210ENST00000506042 HIST2H2AA3Q6FI13 130 aa19.58■□□□□ 0.72
SQSTM1-210ENST00000506042 SBSNQ6UWP8 590 aa19.58■□□□□ 0.72
SQSTM1-210ENST00000506042 RTL4Q6ZR62 310 aa19.58■□□□□ 0.72
SQSTM1-210ENST00000506042 NCCRP1Q6ZVX7 275 aaPredicted RBP19.58■□□□□ 0.72
SQSTM1-210ENST00000506042 SYDE1Q6ZW31 735 aaPredicted RBP19.58■□□□□ 0.72
SQSTM1-210ENST00000506042 ZNF227Q86WZ6 799 aa19.58■□□□□ 0.72
SQSTM1-210ENST00000506042 KLHDC8AQ8IYD2 350 aa19.58■□□□□ 0.72
SQSTM1-210ENST00000506042 CHDHQ8NE62 594 aaPredicted RBP19.58■□□□□ 0.72
SQSTM1-210ENST00000506042 OR2L5Q8NG80 312 aa19.58■□□□□ 0.72
SQSTM1-210ENST00000506042 SMIM10Q96HG1 83 aa19.58■□□□□ 0.72
SQSTM1-210ENST00000506042 MS4A14Q96JA4 679 aa19.58■□□□□ 0.72
SQSTM1-210ENST00000506042 NT5DC2Q9H857 520 aa19.58■□□□□ 0.72
SQSTM1-210ENST00000506042 TXNDC16Q9P2K2 825 aa19.58■□□□□ 0.72
SQSTM1-210ENST00000506042 MYOTQ9UBF9 498 aa19.58■□□□□ 0.72
SQSTM1-210ENST00000506042 PDE9AO76083 593 aa19.57■□□□□ 0.72
SQSTM1-210ENST00000506042 B3GALT4O96024 378 aa19.57■□□□□ 0.72
SQSTM1-210ENST00000506042 P04436 131 aa19.57■□□□□ 0.72
SQSTM1-210ENST00000506042 MSX1P28360 303 aa19.57■□□□□ 0.72
SQSTM1-210ENST00000506042 GABRB3P28472 473 aa19.57■□□□□ 0.72
SQSTM1-210ENST00000506042 MTTPP55157 894 aa19.57■□□□□ 0.72
SQSTM1-210ENST00000506042 PMPCAQ10713 525 aa19.57■□□□□ 0.72
SQSTM1-210ENST00000506042 LAPTM5Q13571 262 aa19.57■□□□□ 0.72
SQSTM1-210ENST00000506042 IL20RBQ6UXL0 311 aa19.57■□□□□ 0.72
SQSTM1-210ENST00000506042 GAS2L3Q86XJ1 694 aa19.57■□□□□ 0.72
SQSTM1-210ENST00000506042 CHERPQ8IWX8 916 aaKnown RBP19.57■□□□□ 0.72
SQSTM1-210ENST00000506042 SCUBE1Q8IWY4 988 aa19.57■□□□□ 0.72
SQSTM1-210ENST00000506042 GOLM1Q8NBJ4 401 aa19.57■□□□□ 0.72
SQSTM1-210ENST00000506042 OR8K3Q8NH51 312 aa19.57■□□□□ 0.72
SQSTM1-210ENST00000506042 SARAFQ96BY9 339 aa19.57■□□□□ 0.72
SQSTM1-210ENST00000506042 REXO4Q9GZR2 422 aaKnown RBP19.57■□□□□ 0.72
SQSTM1-210ENST00000506042 DEFB127Q9H1M4 99 aa19.57■□□□□ 0.72
SQSTM1-210ENST00000506042 LDAHQ9H6V9 325 aa19.57■□□□□ 0.72
SQSTM1-210ENST00000506042 EXO5Q9H790 373 aa19.57■□□□□ 0.72
SQSTM1-210ENST00000506042 POPDC3Q9HBV1 291 aa19.57■□□□□ 0.72
SQSTM1-210ENST00000506042 SACM1LQ9NTJ5 587 aa19.57■□□□□ 0.72
SQSTM1-210ENST00000506042 SDAD1Q9NVU7 687 aaKnown RBP eCLIP19.57■□□□□ 0.72
SQSTM1-210ENST00000506042 WDR1O75083 606 aa19.56■□□□□ 0.72
SQSTM1-210ENST00000506042 OR2J2O76002 312 aa19.56■□□□□ 0.72
SQSTM1-210ENST00000506042 S100BP04271 92 aaPredicted RBP19.56■□□□□ 0.72
SQSTM1-210ENST00000506042 ACVR2AP27037 513 aa19.56■□□□□ 0.72
SQSTM1-210ENST00000506042 ARL4CP56559 192 aa19.56■□□□□ 0.72
SQSTM1-210ENST00000506042 BIKQ13323 160 aa19.56■□□□□ 0.72
SQSTM1-210ENST00000506042 WLSQ5T9L3 541 aa19.56■□□□□ 0.72
SQSTM1-210ENST00000506042 B3GNT6Q6ZMB0 384 aa19.56■□□□□ 0.72
SQSTM1-210ENST00000506042 FGD2Q7Z6J4 655 aa19.56■□□□□ 0.72
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