RNA–Protein interactions for RNA: ENST00000504807.5

DDX41-204, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-204ENST00000504807 FAM219BQ5XKK7 198 aa12.28□□□□□ -0.44
DDX41-204ENST00000504807 GFRALQ6UXV0 394 aa12.28□□□□□ -0.44
DDX41-204ENST00000504807 SYT10Q6XYQ8 523 aa12.28□□□□□ -0.44
DDX41-204ENST00000504807 QSOX2Q6ZRP7 698 aa12.28□□□□□ -0.44
DDX41-204ENST00000504807 ABHD13Q7L211 337 aa12.28□□□□□ -0.44
DDX41-204ENST00000504807 FGD2Q7Z6J4 655 aa12.28□□□□□ -0.44
DDX41-204ENST00000504807 ADAMTSL2Q86TH1 951 aa12.28□□□□□ -0.44
DDX41-204ENST00000504807 SCUBE1Q8IWY4 988 aa12.28□□□□□ -0.44
DDX41-204ENST00000504807 CYP4X1Q8N118 509 aa12.28□□□□□ -0.44
DDX41-204ENST00000504807 APCDD1LQ8NCL9 501 aa12.28□□□□□ -0.44
DDX41-204ENST00000504807 SREK1Q8WXA9 508 aaKnown RBP12.28□□□□□ -0.44
DDX41-204ENST00000504807 ZNF354BQ96LW1 612 aa12.28□□□□□ -0.44
DDX41-204ENST00000504807 FRMD6Q96NE9 622 aa12.28□□□□□ -0.44
DDX41-204ENST00000504807 LPAR4Q99677 370 aa12.28□□□□□ -0.44
DDX41-204ENST00000504807 AIF1LQ9BQI0 150 aa12.28□□□□□ -0.44
DDX41-204ENST00000504807 MCCC2Q9HCC0 563 aa12.28□□□□□ -0.44
DDX41-204ENST00000504807 SH3BGRL2Q9UJC5 107 aa12.28□□□□□ -0.44
DDX41-204ENST00000504807 PTBP2Q9UKA9 531 aaKnown RBP12.28□□□□□ -0.44
DDX41-204ENST00000504807 KCNE2Q9Y6J6 123 aa12.28□□□□□ -0.44
DDX41-204ENST00000504807 MYO7BQ6PIF6 2116 aa12.28□□□□□ -0.44
DDX41-204ENST00000504807 TRGV8A0A0C4DH27 118 aa12.27□□□□□ -0.45
DDX41-204ENST00000504807 ASPDHA6ND91 283 aa12.27□□□□□ -0.45
DDX41-204ENST00000504807 SAGE2PA6NJ88 616 aa12.27□□□□□ -0.45
DDX41-204ENST00000504807 PRMT3O60678 531 aa12.27□□□□□ -0.45
DDX41-204ENST00000504807 RNH1P13489 461 aaKnown RBP12.27□□□□□ -0.45
DDX41-204ENST00000504807 IL10P22301 178 aa12.27□□□□□ -0.45
DDX41-204ENST00000504807 CERS1P27544 350 aa12.27□□□□□ -0.45
DDX41-204ENST00000504807 HNMTP50135 292 aa12.27□□□□□ -0.45
DDX41-204ENST00000504807 GPR143P51810 404 aa12.27□□□□□ -0.45
DDX41-204ENST00000504807 PLTPP55058 493 aa12.27□□□□□ -0.45
DDX41-204ENST00000504807 IRF9Q00978 393 aa12.27□□□□□ -0.45
DDX41-204ENST00000504807 SLC7A5Q01650 507 aa12.27□□□□□ -0.45
DDX41-204ENST00000504807 ACTN3Q08043 901 aaPredicted RBP12.27□□□□□ -0.45
DDX41-204ENST00000504807 DOC2AQ14183 400 aa12.27□□□□□ -0.45
DDX41-204ENST00000504807 MEP1AQ16819 746 aa12.27□□□□□ -0.45
DDX41-204ENST00000504807 TMIGD1Q6UXZ0 262 aa12.27□□□□□ -0.45
DDX41-204ENST00000504807 ZNF793Q6ZN11 406 aa12.27□□□□□ -0.45
DDX41-204ENST00000504807 C3orf62Q6ZUJ4 267 aa12.27□□□□□ -0.45
DDX41-204ENST00000504807 FRA10AC1Q70Z53 315 aa12.27□□□□□ -0.45
DDX41-204ENST00000504807 GALNTL5Q7Z4T8 443 aa12.27□□□□□ -0.45
DDX41-204ENST00000504807 ZGRF1Q86YA3 2104 aa12.27□□□□□ -0.45
DDX41-204ENST00000504807 SIAH3Q8IW03 269 aa12.27□□□□□ -0.45
DDX41-204ENST00000504807 ZNF321PQ8N8H1 164 aa12.27□□□□□ -0.45
DDX41-204ENST00000504807 FAM47BQ8NA70 645 aa12.27□□□□□ -0.45
DDX41-204ENST00000504807 PDPRQ8NCN5 879 aa12.27□□□□□ -0.45
DDX41-204ENST00000504807 TRPV3Q8NET8 790 aa12.27□□□□□ -0.45
DDX41-204ENST00000504807 FBF1Q8TES7 1133 aa12.27□□□□□ -0.45
DDX41-204ENST00000504807 EXT2Q93063 718 aa12.27□□□□□ -0.45
DDX41-204ENST00000504807 C14orf79Q96F83 325 aa12.27□□□□□ -0.45
DDX41-204ENST00000504807 LIN28AQ9H9Z2 209 aaKnown RBP12.27□□□□□ -0.45
DDX41-204ENST00000504807 PRDM9Q9NQV7 894 aa12.27□□□□□ -0.45
DDX41-204ENST00000504807 RNF14Q9UBS8 474 aa12.27□□□□□ -0.45
DDX41-204ENST00000504807 SEC14L3Q9UDX4 400 aa12.27□□□□□ -0.45
DDX41-204ENST00000504807 PABPN1LA6NDY0 278 aaKnown RBP12.26□□□□□ -0.45
DDX41-204ENST00000504807 LRRC14BA6NHZ5 514 aa12.26□□□□□ -0.45
DDX41-204ENST00000504807 CCL21O00585 134 aa12.26□□□□□ -0.45
DDX41-204ENST00000504807 CYR61O00622 381 aa12.26□□□□□ -0.45
DDX41-204ENST00000504807 NDC80O14777 642 aa12.26□□□□□ -0.45
DDX41-204ENST00000504807 ERI3O43414 337 aaKnown RBP12.26□□□□□ -0.45
DDX41-204ENST00000504807 MTHFD2P13995 350 aa12.26□□□□□ -0.45
DDX41-204ENST00000504807 GNAZP19086 355 aa12.26□□□□□ -0.45
DDX41-204ENST00000504807 GP5P40197 560 aa12.26□□□□□ -0.45
DDX41-204ENST00000504807 KIR3DL1P43629 444 aa12.26□□□□□ -0.45
DDX41-204ENST00000504807 PLA2G16P53816 162 aa12.26□□□□□ -0.45
DDX41-204ENST00000504807 MLF1P58340 268 aa12.26□□□□□ -0.45
DDX41-204ENST00000504807 ADORA2A-AS1P86434 159 aa12.26□□□□□ -0.45
DDX41-204ENST00000504807 BMPR2Q13873 1038 aa12.26□□□□□ -0.45
DDX41-204ENST00000504807 C3AR1Q16581 482 aa12.26□□□□□ -0.45
DDX41-204ENST00000504807 CYS1Q717R9 158 aa12.26□□□□□ -0.45
DDX41-204ENST00000504807 ZNF572Q7Z3I7 529 aaPredicted RBP12.26□□□□□ -0.45
DDX41-204ENST00000504807 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.26□□□□□ -0.45
DDX41-204ENST00000504807 CLNKQ7Z7G1 428 aa12.26□□□□□ -0.45
DDX41-204ENST00000504807 ISCA2Q86U28 154 aa12.26□□□□□ -0.45
DDX41-204ENST00000504807 GPSM1Q86YR5 675 aa12.26□□□□□ -0.45
DDX41-204ENST00000504807 PPM1NQ8N819 430 aa12.26□□□□□ -0.45
DDX41-204ENST00000504807 THAP3Q8WTV1 239 aaPredicted RBP12.26□□□□□ -0.45
DDX41-204ENST00000504807 GAL3ST3Q96A11 431 aa12.26□□□□□ -0.45
DDX41-204ENST00000504807 KIAA1191Q96A73 305 aa12.26□□□□□ -0.45
DDX41-204ENST00000504807 WDR34Q96EX3 536 aa12.26□□□□□ -0.45
DDX41-204ENST00000504807 F2RL3Q96RI0 385 aa12.26□□□□□ -0.45
DDX41-204ENST00000504807 ATOH8Q96SQ7 321 aa12.26□□□□□ -0.45
DDX41-204ENST00000504807 CPNE1Q99829 537 aa12.26□□□□□ -0.45
DDX41-204ENST00000504807 UTP23Q9BRU9 249 aaKnown RBP12.26□□□□□ -0.45
DDX41-204ENST00000504807 SORBS1Q9BX66 1292 aaKnown RBP12.26□□□□□ -0.45
DDX41-204ENST00000504807 ALG9Q9H6U8 611 aa12.26□□□□□ -0.45
DDX41-204ENST00000504807 PRDM7Q9NQW5 492 aa12.26□□□□□ -0.45
DDX41-204ENST00000504807 ZDHHC18Q9NUE0 388 aa12.26□□□□□ -0.45
DDX41-204ENST00000504807 DNAJC11Q9NVH1 559 aa12.26□□□□□ -0.45
DDX41-204ENST00000504807 NSMCE4AQ9NXX6 385 aa12.26□□□□□ -0.45
DDX41-204ENST00000504807 WWOXQ9NZC7 414 aa12.26□□□□□ -0.45
DDX41-204ENST00000504807 TINAGQ9UJW2 476 aa12.26□□□□□ -0.45
DDX41-204ENST00000504807 UBXN8O00124 270 aa12.25□□□□□ -0.45
DDX41-204ENST00000504807 RTCAO00442 366 aaKnown RBP12.25□□□□□ -0.45
DDX41-204ENST00000504807 EIF3HO15372 352 aaKnown RBP eCLIP12.25□□□□□ -0.45
DDX41-204ENST00000504807 SH3BGRLO75368 114 aa12.25□□□□□ -0.45
DDX41-204ENST00000504807 MYO1DO94832 1006 aa12.25□□□□□ -0.45
DDX41-204ENST00000504807 SP1P08047 785 aa12.25□□□□□ -0.45
DDX41-204ENST00000504807 STMN1P16949 149 aa12.25□□□□□ -0.45
DDX41-204ENST00000504807 KLK2P20151 261 aa12.25□□□□□ -0.45
DDX41-204ENST00000504807 JAK1P23458 1154 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms